RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 CCER1Q8TC90 406 aaPredicted RBP17.05■□□□□ 0.32
LDHA-211ENST00000494573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
LDHA-211ENST00000494573 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
LDHA-211ENST00000494573 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
LDHA-211ENST00000494573 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
LDHA-211ENST00000494573 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
LDHA-211ENST00000494573 TIAM1Q13009 1591 aa17■□□□□ 0.31
LDHA-211ENST00000494573 PBRM1Q86U86 1689 aa17■□□□□ 0.31
LDHA-211ENST00000494573 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
LDHA-211ENST00000494573 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
LDHA-211ENST00000494573 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
LDHA-211ENST00000494573 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
LDHA-211ENST00000494573 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
LDHA-211ENST00000494573 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
LDHA-211ENST00000494573 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.37e-13■■■■□ 23.2
LDHA-211ENST00000494573 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
LDHA-211ENST00000494573 SAMD9Q5K651 1589 aa16.92■□□□□ 0.3
LDHA-211ENST00000494573 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
LDHA-211ENST00000494573 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
LDHA-211ENST00000494573 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
LDHA-211ENST00000494573 WDR62O43379 1518 aa16.86■□□□□ 0.29
LDHA-211ENST00000494573 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
LDHA-211ENST00000494573 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
LDHA-211ENST00000494573 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
LDHA-211ENST00000494573 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
LDHA-211ENST00000494573 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
LDHA-211ENST00000494573 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
LDHA-211ENST00000494573 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
LDHA-211ENST00000494573 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
LDHA-211ENST00000494573 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
LDHA-211ENST00000494573 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
LDHA-211ENST00000494573 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
LDHA-211ENST00000494573 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
LDHA-211ENST00000494573 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
LDHA-211ENST00000494573 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
LDHA-211ENST00000494573 GRIN2BQ13224 1484 aa16.77■□□□□ 0.28
LDHA-211ENST00000494573 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
LDHA-211ENST00000494573 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
LDHA-211ENST00000494573 P3H3Q8IVL6 736 aa16.7■□□□□ 0.26
LDHA-211ENST00000494573 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
LDHA-211ENST00000494573 PHLDB1Q86UU1 1377 aa16.68■□□□□ 0.26
LDHA-211ENST00000494573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
LDHA-211ENST00000494573 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
LDHA-211ENST00000494573 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
LDHA-211ENST00000494573 UGGT2Q9NYU1 1516 aa16.67■□□□□ 0.26
LDHA-211ENST00000494573 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
LDHA-211ENST00000494573 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
LDHA-211ENST00000494573 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
LDHA-211ENST00000494573 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
LDHA-211ENST00000494573 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
LDHA-211ENST00000494573 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
LDHA-211ENST00000494573 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
LDHA-211ENST00000494573 SETD5Q9C0A6 1442 aa16.59■□□□□ 0.25
LDHA-211ENST00000494573 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
LDHA-211ENST00000494573 KIAA0556O60303 1618 aa16.59■□□□□ 0.25
LDHA-211ENST00000494573 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
LDHA-211ENST00000494573 GRIN2AQ12879 1464 aa16.58■□□□□ 0.24
LDHA-211ENST00000494573 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
LDHA-211ENST00000494573 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
LDHA-211ENST00000494573 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
LDHA-211ENST00000494573 RAB3GAP2Q9H2M9 1393 aa16.56■□□□□ 0.24
LDHA-211ENST00000494573 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
LDHA-211ENST00000494573 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
LDHA-211ENST00000494573 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
LDHA-211ENST00000494573 EPRSP07814 1512 aaKnown RBP16.52■□□□□ 0.24
LDHA-211ENST00000494573 MAGI3Q5TCQ9 1506 aa16.52■□□□□ 0.24
LDHA-211ENST00000494573 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.23
LDHA-211ENST00000494573 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
LDHA-211ENST00000494573 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
LDHA-211ENST00000494573 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
LDHA-211ENST00000494573 RAPGEF6Q8TEU7 1601 aa16.5■□□□□ 0.23
LDHA-211ENST00000494573 ITGAEP38570 1179 aa16.5■□□□□ 0.23
LDHA-211ENST00000494573 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
LDHA-211ENST00000494573 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
LDHA-211ENST00000494573 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
LDHA-211ENST00000494573 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.23
LDHA-211ENST00000494573 CDK13Q14004 1512 aaKnown RBP16.44■□□□□ 0.22
LDHA-211ENST00000494573 NUP160Q12769 1436 aa16.44■□□□□ 0.22
LDHA-211ENST00000494573 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
LDHA-211ENST00000494573 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
LDHA-211ENST00000494573 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
LDHA-211ENST00000494573 AKNAQ7Z591 1439 aa16.38■□□□□ 0.21
LDHA-211ENST00000494573 NUP153P49790 1475 aaKnown RBP16.38■□□□□ 0.21
LDHA-211ENST00000494573 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
LDHA-211ENST00000494573 PTPRKQ15262 1439 aa16.36■□□□□ 0.21
LDHA-211ENST00000494573 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
LDHA-211ENST00000494573 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
LDHA-211ENST00000494573 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
LDHA-211ENST00000494573 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
LDHA-211ENST00000494573 NAIPQ13075 1403 aa16.34■□□□□ 0.21
LDHA-211ENST00000494573 UACAQ9BZF9 1416 aa16.34■□□□□ 0.21
LDHA-211ENST00000494573 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
LDHA-211ENST00000494573 CHD1O14646 1710 aa16.32■□□□□ 0.2
LDHA-211ENST00000494573 ABCA8O94911 1581 aa16.3■□□□□ 0.2
LDHA-211ENST00000494573 ADGBQ8N7X0 1667 aa16.29■□□□□ 0.2
LDHA-211ENST00000494573 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
LDHA-211ENST00000494573 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
LDHA-211ENST00000494573 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
LDHA-211ENST00000494573 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
LDHA-211ENST00000494573 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms