RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
UBE3C-207ENST00000494532 NUP160Q12769 1436 aa22.69■■□□□ 1.22
UBE3C-207ENST00000494532 IQGAP2Q13576 1575 aa22.64■■□□□ 1.22
UBE3C-207ENST00000494532 CEP162Q5TB80 1403 aa22.64■■□□□ 1.21
UBE3C-207ENST00000494532 KIAA0586Q9BVV6 1533 aa22.63■■□□□ 1.21
UBE3C-207ENST00000494532 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
UBE3C-207ENST00000494532 CLIP1P30622 1438 aa22.57■■□□□ 1.2
UBE3C-207ENST00000494532 CLASP1Q7Z460 1538 aa22.53■■□□□ 1.2
UBE3C-207ENST00000494532 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.19
UBE3C-207ENST00000494532 EFCAB5A4FU69 1503 aa22.51■■□□□ 1.19
UBE3C-207ENST00000494532 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
UBE3C-207ENST00000494532 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
UBE3C-207ENST00000494532 SAMD9Q5K651 1589 aa22.47■■□□□ 1.19
UBE3C-207ENST00000494532 JPH4Q96JJ6 628 aa22.46■■□□□ 1.19
UBE3C-207ENST00000494532 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
UBE3C-207ENST00000494532 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
UBE3C-207ENST00000494532 KIAA0556O60303 1618 aa22.42■■□□□ 1.18
UBE3C-207ENST00000494532 DISP1Q96F81 1524 aa22.41■■□□□ 1.18
UBE3C-207ENST00000494532 P3H3Q8IVL6 736 aa22.4■■□□□ 1.18
UBE3C-207ENST00000494532 FHOD3Q2V2M9 1422 aa22.4■■□□□ 1.18
UBE3C-207ENST00000494532 CARMIL2Q6F5E8 1435 aa22.39■■□□□ 1.17
UBE3C-207ENST00000494532 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
UBE3C-207ENST00000494532 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
UBE3C-207ENST00000494532 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
UBE3C-207ENST00000494532 FMN1Q68DA7 1419 aa22.28■■□□□ 1.16
UBE3C-207ENST00000494532 TTBK1Q5TCY1 1321 aaPredicted RBP22.24■■□□□ 1.15
UBE3C-207ENST00000494532 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
UBE3C-207ENST00000494532 PTPRGP23470 1445 aa22.19■■□□□ 1.14
UBE3C-207ENST00000494532 FYCO1Q9BQS8 1478 aa22.17■■□□□ 1.14
UBE3C-207ENST00000494532 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
UBE3C-207ENST00000494532 ARHGEF11O15085 1522 aa22.15■■□□□ 1.14
UBE3C-207ENST00000494532 RAPGEF6Q8TEU7 1601 aa22.14■■□□□ 1.14
UBE3C-207ENST00000494532 HECW1Q76N89 1606 aa22.13■■□□□ 1.13
UBE3C-207ENST00000494532 PLB1Q6P1J6 1458 aa22.12■■□□□ 1.13
UBE3C-207ENST00000494532 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
UBE3C-207ENST00000494532 ABCA8O94911 1581 aa22.11■■□□□ 1.13
UBE3C-207ENST00000494532 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
UBE3C-207ENST00000494532 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
UBE3C-207ENST00000494532 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
UBE3C-207ENST00000494532 APLP2Q06481 763 aa22.09■■□□□ 1.13
UBE3C-207ENST00000494532 UACAQ9BZF9 1416 aa22.06■■□□□ 1.12
UBE3C-207ENST00000494532 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
UBE3C-207ENST00000494532 LRRIQ1Q96JM4 1722 aa22.05■■□□□ 1.12
UBE3C-207ENST00000494532 CFAP43Q8NDM7 1665 aa22.04■■□□□ 1.12
UBE3C-207ENST00000494532 ABCC2Q92887 1545 aa22.03■■□□□ 1.12
UBE3C-207ENST00000494532 TIAM1Q13009 1591 aa22.03■■□□□ 1.12
UBE3C-207ENST00000494532 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
UBE3C-207ENST00000494532 EPRSP07814 1512 aaKnown RBP22.01■■□□□ 1.11
UBE3C-207ENST00000494532 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
UBE3C-207ENST00000494532 UHRF1BP1LA0JNW5 1464 aa22■■□□□ 1.11
UBE3C-207ENST00000494532 CDK13Q14004 1512 aaKnown RBP21.99■■□□□ 1.11
UBE3C-207ENST00000494532 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
UBE3C-207ENST00000494532 ADCY10Q96PN6 1610 aa21.96■■□□□ 1.11
UBE3C-207ENST00000494532 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
UBE3C-207ENST00000494532 ATP10BO94823 1461 aa21.92■■□□□ 1.1
UBE3C-207ENST00000494532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
UBE3C-207ENST00000494532 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
UBE3C-207ENST00000494532 LRRC9Q6ZRR7 1453 aa21.9■■□□□ 1.1
UBE3C-207ENST00000494532 CYB5RLQ6IPT4 315 aa21.9■■□□□ 1.1
UBE3C-207ENST00000494532 ZCCHC11Q5TAX3 1644 aaKnown RBP21.89■■□□□ 1.09
UBE3C-207ENST00000494532 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.09
UBE3C-207ENST00000494532 KDM5BQ9UGL1 1544 aa21.89■■□□□ 1.09
UBE3C-207ENST00000494532 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
UBE3C-207ENST00000494532 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
UBE3C-207ENST00000494532 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
UBE3C-207ENST00000494532 MAGI3Q5TCQ9 1506 aa21.85■■□□□ 1.09
UBE3C-207ENST00000494532 NPM1P06748 294 aaKnown RBP eCLIP21.81■■□□□ 1.08
UBE3C-207ENST00000494532 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
UBE3C-207ENST00000494532 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
UBE3C-207ENST00000494532 PLEKHD1A6NEE1 506 aa21.8■■□□□ 1.08
UBE3C-207ENST00000494532 SUPT6HQ7KZ85 1726 aaKnown RBP21.78■■□□□ 1.08
UBE3C-207ENST00000494532 KIF14Q15058 1648 aa21.73■■□□□ 1.07
UBE3C-207ENST00000494532 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
UBE3C-207ENST00000494532 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
UBE3C-207ENST00000494532 ASXL2Q76L83 1435 aa21.71■■□□□ 1.07
UBE3C-207ENST00000494532 MAPKBP1O60336 1514 aa21.67■■□□□ 1.06
UBE3C-207ENST00000494532 PHLDB1Q86UU1 1377 aa21.66■■□□□ 1.06
UBE3C-207ENST00000494532 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
UBE3C-207ENST00000494532 ABCC10Q5T3U5 1492 aa21.63■■□□□ 1.05
UBE3C-207ENST00000494532 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
UBE3C-207ENST00000494532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.61■■□□□ 1.05
UBE3C-207ENST00000494532 MYOM3Q5VTT5 1437 aa21.61■■□□□ 1.05
UBE3C-207ENST00000494532 ITSN2Q9NZM3 1697 aa21.6■■□□□ 1.05
UBE3C-207ENST00000494532 TTC37Q6PGP7 1564 aa21.6■■□□□ 1.05
UBE3C-207ENST00000494532 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
UBE3C-207ENST00000494532 CDC42BPAQ5VT25 1732 aa21.58■■□□□ 1.04
UBE3C-207ENST00000494532 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
UBE3C-207ENST00000494532 RRBP1Q9P2E9 1410 aaKnown RBP21.56■■□□□ 1.04
UBE3C-207ENST00000494532 GPATCH8Q9UKJ3 1502 aaKnown RBP21.55■■□□□ 1.04
UBE3C-207ENST00000494532 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
UBE3C-207ENST00000494532 MYO5CQ9NQX4 1742 aa21.55■■□□□ 1.04
UBE3C-207ENST00000494532 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
UBE3C-207ENST00000494532 MIA2Q96PC5 1412 aa21.53■■□□□ 1.04
UBE3C-207ENST00000494532 PTPN23Q9H3S7 1636 aa21.51■■□□□ 1.03
UBE3C-207ENST00000494532 CDC42BPBQ9Y5S2 1711 aa21.5■■□□□ 1.03
UBE3C-207ENST00000494532 DIP2BQ9P265 1576 aa21.49■■□□□ 1.03
UBE3C-207ENST00000494532 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
UBE3C-207ENST00000494532 GLI2P10070 1586 aa21.48■■□□□ 1.03
UBE3C-207ENST00000494532 ARHGAP5Q13017 1502 aa21.48■■□□□ 1.03
UBE3C-207ENST00000494532 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms