RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 NUP160Q12769 1436 aa18.71■□□□□ 0.59
PDLIM1-205ENST00000493949 KDM4FA0A1W2PPD8 638 aa18.69■□□□□ 0.58
PDLIM1-205ENST00000493949 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
PDLIM1-205ENST00000493949 ABCC10Q5T3U5 1492 aa18.65■□□□□ 0.58
PDLIM1-205ENST00000493949 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
PDLIM1-205ENST00000493949 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
PDLIM1-205ENST00000493949 KDM6BO15054 1643 aa18.6■□□□□ 0.57
PDLIM1-205ENST00000493949 DIP2BQ9P265 1576 aa18.59■□□□□ 0.57
PDLIM1-205ENST00000493949 FAM69CQ0P6D2 419 aa18.57■□□□□ 0.56
PDLIM1-205ENST00000493949 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
PDLIM1-205ENST00000493949 PRG4Q92954 1404 aaPredicted RBP18.51■□□□□ 0.55
PDLIM1-205ENST00000493949 TSPOAP1O95153 1857 aa18.48■□□□□ 0.55
PDLIM1-205ENST00000493949 ADCY10Q96PN6 1610 aa18.47■□□□□ 0.55
PDLIM1-205ENST00000493949 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
PDLIM1-205ENST00000493949 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDLIM1-205ENST00000493949 JPH4Q96JJ6 628 aa18.44■□□□□ 0.54
PDLIM1-205ENST00000493949 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
PDLIM1-205ENST00000493949 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.54
PDLIM1-205ENST00000493949 ADGRL1O94910 1474 aa18.39■□□□□ 0.53
PDLIM1-205ENST00000493949 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
PDLIM1-205ENST00000493949 BIVM-ERCC5R4GMW8 1640 aa18.37■□□□□ 0.53
PDLIM1-205ENST00000493949 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
PDLIM1-205ENST00000493949 PPRC1Q5VV67 1664 aaKnown RBP18.33■□□□□ 0.52
PDLIM1-205ENST00000493949 GLI2P10070 1586 aa18.27■□□□□ 0.52
PDLIM1-205ENST00000493949 KIAA0586Q9BVV6 1533 aa18.22■□□□□ 0.51
PDLIM1-205ENST00000493949 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
PDLIM1-205ENST00000493949 COL17A1Q9UMD9 1497 aaPredicted RBP18.2■□□□□ 0.5
PDLIM1-205ENST00000493949 PLB1Q6P1J6 1458 aa18.19■□□□□ 0.5
PDLIM1-205ENST00000493949 ABCC2Q92887 1545 aa18.18■□□□□ 0.5
PDLIM1-205ENST00000493949 ASXL2Q76L83 1435 aa18.15■□□□□ 0.5
PDLIM1-205ENST00000493949 MAP3K4Q9Y6R4 1608 aa18.15■□□□□ 0.5
PDLIM1-205ENST00000493949 CUL7Q14999 1698 aa18.13■□□□□ 0.49
PDLIM1-205ENST00000493949 PTPRGP23470 1445 aa18.13■□□□□ 0.49
PDLIM1-205ENST00000493949 UHRF1BP1LA0JNW5 1464 aa18.1■□□□□ 0.49
PDLIM1-205ENST00000493949 TEX14Q8IWB6 1497 aa18.09■□□□□ 0.49
PDLIM1-205ENST00000493949 EPRSP07814 1512 aaKnown RBP18.07■□□□□ 0.48
PDLIM1-205ENST00000493949 TNIKQ9UKE5 1360 aa18.05■□□□□ 0.48
PDLIM1-205ENST00000493949 CARMIL2Q6F5E8 1435 aa18.01■□□□□ 0.47
PDLIM1-205ENST00000493949 KDM5BQ9UGL1 1544 aa18.01■□□□□ 0.47
PDLIM1-205ENST00000493949 IGF1RP08069 1367 aa18■□□□□ 0.47
PDLIM1-205ENST00000493949 UACAQ9BZF9 1416 aa17.98■□□□□ 0.47
PDLIM1-205ENST00000493949 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-205ENST00000493949 ZCCHC11Q5TAX3 1644 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-205ENST00000493949 IQGAP2Q13576 1575 aa17.93■□□□□ 0.46
PDLIM1-205ENST00000493949 KIF21BO75037 1637 aa17.92■□□□□ 0.46
PDLIM1-205ENST00000493949 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
PDLIM1-205ENST00000493949 LMTK3Q96Q04 1460 aa17.91■□□□□ 0.46
PDLIM1-205ENST00000493949 MAGI3Q5TCQ9 1506 aa17.91■□□□□ 0.46
PDLIM1-205ENST00000493949 KIF27Q86VH2 1401 aa17.9■□□□□ 0.46
PDLIM1-205ENST00000493949 CFAP43Q8NDM7 1665 aa17.9■□□□□ 0.46
PDLIM1-205ENST00000493949 DISP1Q96F81 1524 aa17.9■□□□□ 0.46
PDLIM1-205ENST00000493949 WDR7Q9Y4E6 1490 aa17.88■□□□□ 0.45
PDLIM1-205ENST00000493949 ADAMTSL3P82987 1691 aa17.87■□□□□ 0.45
PDLIM1-205ENST00000493949 PTPRMP28827 1452 aa17.85■□□□□ 0.45
PDLIM1-205ENST00000493949 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
PDLIM1-205ENST00000493949 PCF11O94913 1555 aaKnown RBP17.82■□□□□ 0.44
PDLIM1-205ENST00000493949 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
PDLIM1-205ENST00000493949 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
PDLIM1-205ENST00000493949 ARAP3Q8WWN8 1544 aa17.8■□□□□ 0.44
PDLIM1-205ENST00000493949 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
PDLIM1-205ENST00000493949 SOCS7O14512 581 aa17.76■□□□□ 0.43
PDLIM1-205ENST00000493949 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
PDLIM1-205ENST00000493949 MAPK8IP2Q13387 824 aaPredicted RBP17.74■□□□□ 0.43
PDLIM1-205ENST00000493949 ILDR2Q71H61 639 aa17.71■□□□□ 0.43
PDLIM1-205ENST00000493949 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
PDLIM1-205ENST00000493949 MADDQ8WXG6 1647 aa17.71■□□□□ 0.43
PDLIM1-205ENST00000493949 ABCA8O94911 1581 aa17.68■□□□□ 0.42
PDLIM1-205ENST00000493949 PHLDB1Q86UU1 1377 aa17.67■□□□□ 0.42
PDLIM1-205ENST00000493949 CERKQ8TCT0 537 aa17.66■□□□□ 0.42
PDLIM1-205ENST00000493949 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
PDLIM1-205ENST00000493949 DISP3Q9P2K9 1392 aa17.64■□□□□ 0.41
PDLIM1-205ENST00000493949 RIMS1Q86UR5 1692 aaKnown RBP17.62■□□□□ 0.41
PDLIM1-205ENST00000493949 RAPGEF2Q9Y4G8 1499 aa17.62■□□□□ 0.41
PDLIM1-205ENST00000493949 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
PDLIM1-205ENST00000493949 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
PDLIM1-205ENST00000493949 FRMPD1Q5SYB0 1578 aa17.59■□□□□ 0.41
PDLIM1-205ENST00000493949 CTTNBP2Q8WZ74 1663 aa17.58■□□□□ 0.41
PDLIM1-205ENST00000493949 NEO1Q92859 1461 aa17.58■□□□□ 0.41
PDLIM1-205ENST00000493949 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
PDLIM1-205ENST00000493949 RAPGEF3O95398 923 aa17.55■□□□□ 0.4
PDLIM1-205ENST00000493949 HSPA2P54652 639 aa17.55■□□□□ 0.4
PDLIM1-205ENST00000493949 ARHGEF40Q8TER5 1519 aa17.54■□□□□ 0.4
PDLIM1-205ENST00000493949 SPATA31D1Q6ZQQ2 1576 aa17.53■□□□□ 0.4
PDLIM1-205ENST00000493949 ARID4BQ4LE39 1312 aaPredicted RBP17.51■□□□□ 0.39
PDLIM1-205ENST00000493949 ATP10BO94823 1461 aa17.5■□□□□ 0.39
PDLIM1-205ENST00000493949 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
PDLIM1-205ENST00000493949 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
PDLIM1-205ENST00000493949 TTC37Q6PGP7 1564 aa17.45■□□□□ 0.38
PDLIM1-205ENST00000493949 FANCAO15360 1455 aa17.44■□□□□ 0.38
PDLIM1-205ENST00000493949 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
PDLIM1-205ENST00000493949 FER1L4A9Z1Z3 1794 aa17.44■□□□□ 0.38
PDLIM1-205ENST00000493949 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
PDLIM1-205ENST00000493949 STRCQ7RTU9 1775 aa17.43■□□□□ 0.38
PDLIM1-205ENST00000493949 FHOD3Q2V2M9 1422 aa17.43■□□□□ 0.38
PDLIM1-205ENST00000493949 ZMYM4Q5VZL5 1548 aa17.42■□□□□ 0.38
PDLIM1-205ENST00000493949 YEATS2Q9ULM3 1422 aa17.4■□□□□ 0.38
PDLIM1-205ENST00000493949 DENND4BO75064 1496 aaPredicted RBP17.4■□□□□ 0.38
PDLIM1-205ENST00000493949 AKNAQ7Z591 1439 aa17.39■□□□□ 0.38
PDLIM1-205ENST00000493949 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
PDLIM1-205ENST00000493949 CFAP74Q9C0B2 1584 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms