RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 PRG4Q92954 1404 aaPredicted RBP41.11■■■■■ 4.17
RHBDD3-206ENST00000493894 JPH4Q96JJ6 628 aa41.06■■■■■ 4.16
RHBDD3-206ENST00000493894 KIAA0586Q9BVV6 1533 aa40.95■■■■■ 4.15
RHBDD3-206ENST00000493894 CARMIL1Q5VZK9 1371 aa40.88■■■■■ 4.14
RHBDD3-206ENST00000493894 IQGAP2Q13576 1575 aa40.65■■■■■ 4.1
RHBDD3-206ENST00000493894 ADCY10Q96PN6 1610 aa40.64■■■■■ 4.1
RHBDD3-206ENST00000493894 RAPGEF2Q9Y4G8 1499 aa40.58■■■■■ 4.09
RHBDD3-206ENST00000493894 NPM1P06748 294 aaKnown RBP eCLIP40.58■■■■■ 4.09
RHBDD3-206ENST00000493894 KIF13AQ9H1H9 1805 aa40.58■■■■■ 4.09
RHBDD3-206ENST00000493894 CARMIL2Q6F5E8 1435 aa40.56■■■■■ 4.08
RHBDD3-206ENST00000493894 MAPKBP1O60336 1514 aa40.56■■■■■ 4.08
RHBDD3-206ENST00000493894 PTPRGP23470 1445 aa40.5■■■■■ 4.07
RHBDD3-206ENST00000493894 TNIKQ9UKE5 1360 aa40.47■■■■■ 4.07
RHBDD3-206ENST00000493894 ABCC10Q5T3U5 1492 aa40.45■■■■■ 4.07
RHBDD3-206ENST00000493894 DIP2BQ9P265 1576 aa40.39■■■■■ 4.06
RHBDD3-206ENST00000493894 TTBK1Q5TCY1 1321 aaPredicted RBP40.39■■■■■ 4.06
RHBDD3-206ENST00000493894 DISP1Q96F81 1524 aa40.38■■■■■ 4.06
RHBDD3-206ENST00000493894 UGGT2Q9NYU1 1516 aa40.37■■■■■ 4.05
RHBDD3-206ENST00000493894 FAM69CQ0P6D2 419 aa40.35■■■■■ 4.05
RHBDD3-206ENST00000493894 CTTNBP2Q8WZ74 1663 aa40.3■■■■■ 4.04
RHBDD3-206ENST00000493894 ABCC2Q92887 1545 aa40.29■■■■■ 4.04
RHBDD3-206ENST00000493894 KIAA0556O60303 1618 aa40.27■■■■■ 4.04
RHBDD3-206ENST00000493894 UHRF1BP1LA0JNW5 1464 aa40.25■■■■■ 4.03
RHBDD3-206ENST00000493894 PRXQ9BXM0 1461 aa40.22■■■■■ 4.03
RHBDD3-206ENST00000493894 UACAQ9BZF9 1416 aa40.22■■■■■ 4.03
RHBDD3-206ENST00000493894 ASXL2Q76L83 1435 aa40.1■■■■■ 4.01
RHBDD3-206ENST00000493894 GOLGA3Q08378 1498 aa40.09■■■■■ 4.01
RHBDD3-206ENST00000493894 PLB1Q6P1J6 1458 aa40.09■■■■■ 4.01
RHBDD3-206ENST00000493894 KDM5BQ9UGL1 1544 aa40.05■■■■■ 4
RHBDD3-206ENST00000493894 TSPOAP1O95153 1857 aa40.04■■■■■ 4
RHBDD3-206ENST00000493894 ZCCHC11Q5TAX3 1644 aaKnown RBP39.99■■■■□ 3.99
RHBDD3-206ENST00000493894 KDM6BO15054 1643 aa39.98■■■■□ 3.99
RHBDD3-206ENST00000493894 GLI2P10070 1586 aa39.97■■■■□ 3.99
RHBDD3-206ENST00000493894 AEBP2Q6ZN18 517 aaPredicted RBP39.95■■■■□ 3.99
RHBDD3-206ENST00000493894 CSRNP3Q8WYN3 585 aa39.93■■■■□ 3.98
RHBDD3-206ENST00000493894 EEA1Q15075 1411 aa39.91■■■■□ 3.98
RHBDD3-206ENST00000493894 EPRSP07814 1512 aaKnown RBP39.86■■■■□ 3.97
RHBDD3-206ENST00000493894 ABCA8O94911 1581 aa39.85■■■■□ 3.97
RHBDD3-206ENST00000493894 PPRC1Q5VV67 1664 aaKnown RBP39.83■■■■□ 3.97
RHBDD3-206ENST00000493894 WDR7Q9Y4E6 1490 aa39.79■■■■□ 3.96
RHBDD3-206ENST00000493894 MAP3K4Q9Y6R4 1608 aa39.78■■■■□ 3.96
RHBDD3-206ENST00000493894 SAMD9Q5K651 1589 aa39.72■■■■□ 3.95
RHBDD3-206ENST00000493894 FAM9AQ8IZU1 332 aaPredicted RBP39.69■■■■□ 3.94
RHBDD3-206ENST00000493894 TEX14Q8IWB6 1497 aa39.67■■■■□ 3.94
RHBDD3-206ENST00000493894 P3H3Q8IVL6 736 aa39.65■■■■□ 3.94
RHBDD3-206ENST00000493894 KIF21BO75037 1637 aa39.58■■■■□ 3.93
RHBDD3-206ENST00000493894 CFAP43Q8NDM7 1665 aa39.54■■■■□ 3.92
RHBDD3-206ENST00000493894 RAPGEF6Q8TEU7 1601 aa39.51■■■■□ 3.91
RHBDD3-206ENST00000493894 KCNH8Q96L42 1107 aa39.49■■■■□ 3.91
RHBDD3-206ENST00000493894 ATP10BO94823 1461 aa39.48■■■■□ 3.91
RHBDD3-206ENST00000493894 COL17A1Q9UMD9 1497 aaPredicted RBP39.48■■■■□ 3.91
RHBDD3-206ENST00000493894 CD109Q6YHK3 1445 aa39.48■■■■□ 3.91
RHBDD3-206ENST00000493894 ARID3CA6NKF2 412 aa39.47■■■■□ 3.91
RHBDD3-206ENST00000493894 MAGI3Q5TCQ9 1506 aa39.46■■■■□ 3.91
RHBDD3-206ENST00000493894 RANGAP1P46060 587 aaPredicted RBP39.45■■■■□ 3.91
RHBDD3-206ENST00000493894 FHOD3Q2V2M9 1422 aa39.42■■■■□ 3.9
RHBDD3-206ENST00000493894 CHIC1Q5VXU3 224 aa39.4■■■■□ 3.9
RHBDD3-206ENST00000493894 EFCAB5A4FU69 1503 aa39.4■■■■□ 3.9
RHBDD3-206ENST00000493894 NUP153P49790 1475 aaKnown RBP39.33■■■■□ 3.89
RHBDD3-206ENST00000493894 KDM4FA0A1W2PPD8 638 aa39.33■■■■□ 3.89
RHBDD3-206ENST00000493894 ABCA9Q8IUA7 1624 aa39.29■■■■□ 3.88
RHBDD3-206ENST00000493894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.27■■■■□ 3.88
RHBDD3-206ENST00000493894 HNRNPUL2Q1KMD3 747 aaKnown RBP39.27■■■■□ 3.88
RHBDD3-206ENST00000493894 ADGRL1O94910 1474 aa39.19■■■■□ 3.86
RHBDD3-206ENST00000493894 UBTFP17480 764 aaKnown RBP39.19■■■■□ 3.86
RHBDD3-206ENST00000493894 EHMT2Q96KQ7 1210 aa39.18■■■■□ 3.86
RHBDD3-206ENST00000493894 ARAP3Q8WWN8 1544 aa39.14■■■■□ 3.86
RHBDD3-206ENST00000493894 PHLDB1Q86UU1 1377 aa39.08■■■■□ 3.85
RHBDD3-206ENST00000493894 PLEKHD1A6NEE1 506 aa39.06■■■■□ 3.84
RHBDD3-206ENST00000493894 NEO1Q92859 1461 aa39.05■■■■□ 3.84
RHBDD3-206ENST00000493894 ARHGAP35Q9NRY4 1499 aa39.03■■■■□ 3.84
RHBDD3-206ENST00000493894 FMN1Q68DA7 1419 aa39.02■■■■□ 3.84
RHBDD3-206ENST00000493894 CDK13Q14004 1512 aaKnown RBP38.99■■■■□ 3.83
RHBDD3-206ENST00000493894 HECW1Q76N89 1606 aa38.97■■■■□ 3.83
RHBDD3-206ENST00000493894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.93■■■■□ 3.82
RHBDD3-206ENST00000493894 TTC37Q6PGP7 1564 aa38.89■■■■□ 3.82
RHBDD3-206ENST00000493894 CFAP74Q9C0B2 1584 aa38.88■■■■□ 3.81
RHBDD3-206ENST00000493894 FRMPD1Q5SYB0 1578 aa38.86■■■■□ 3.81
RHBDD3-206ENST00000493894 RAPGEF3O95398 923 aa38.85■■■■□ 3.81
RHBDD3-206ENST00000493894 ATP1B4Q9UN42 357 aaPredicted RBP38.84■■■■□ 3.81
RHBDD3-206ENST00000493894 FANCAO15360 1455 aa38.83■■■■□ 3.81
RHBDD3-206ENST00000493894 AKNAQ7Z591 1439 aa38.78■■■■□ 3.8
RHBDD3-206ENST00000493894 DENND4BO75064 1496 aaPredicted RBP38.76■■■■□ 3.8
RHBDD3-206ENST00000493894 RICTORQ6R327 1708 aa38.73■■■■□ 3.79
RHBDD3-206ENST00000493894 CDK11AQ9UQ88 783 aaPredicted RBP38.73■■■■□ 3.79
RHBDD3-206ENST00000493894 ARHGEF40Q8TER5 1519 aa38.68■■■■□ 3.78
RHBDD3-206ENST00000493894 KIF14Q15058 1648 aa38.67■■■■□ 3.78
RHBDD3-206ENST00000493894 PLCH2O75038 1416 aa38.67■■■■□ 3.78
RHBDD3-206ENST00000493894 LRRIQ1Q96JM4 1722 aa38.66■■■■□ 3.78
RHBDD3-206ENST00000493894 PCF11O94913 1555 aaKnown RBP38.65■■■■□ 3.78
RHBDD3-206ENST00000493894 MYO5CQ9NQX4 1742 aa38.64■■■■□ 3.78
RHBDD3-206ENST00000493894 TROQ12816 1431 aaPredicted RBP38.63■■■■□ 3.78
RHBDD3-206ENST00000493894 CLIP1P30622 1438 aa38.63■■■■□ 3.77
RHBDD3-206ENST00000493894 ZMYM4Q5VZL5 1548 aa38.62■■■■□ 3.77
RHBDD3-206ENST00000493894 CASKIN1Q8WXD9 1431 aa38.6■■■■□ 3.77
RHBDD3-206ENST00000493894 CCDC18Q5T9S5 1454 aa38.58■■■■□ 3.77
RHBDD3-206ENST00000493894 ADAMTSL3P82987 1691 aa38.58■■■■□ 3.77
RHBDD3-206ENST00000493894 HECW2Q9P2P5 1572 aa38.57■■■■□ 3.76
RHBDD3-206ENST00000493894 BCORL1Q5H9F3 1711 aa38.55■■■■□ 3.76
RHBDD3-206ENST00000493894 ARID4BQ4LE39 1312 aaPredicted RBP38.53■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms