RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 KIAA0586Q9BVV6 1533 aa23.37■■□□□ 1.33
PDCD11-206ENST00000493610 JPH4Q96JJ6 628 aa23.36■■□□□ 1.33
PDCD11-206ENST00000493610 PRG4Q92954 1404 aaPredicted RBP23.34■■□□□ 1.33
PDCD11-206ENST00000493610 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
PDCD11-206ENST00000493610 PRXQ9BXM0 1461 aa23.25■■□□□ 1.31
PDCD11-206ENST00000493610 IQGAP2Q13576 1575 aa23.21■■□□□ 1.31
PDCD11-206ENST00000493610 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
PDCD11-206ENST00000493610 DISP1Q96F81 1524 aa23.13■■□□□ 1.29
PDCD11-206ENST00000493610 UGGT2Q9NYU1 1516 aa23.13■■□□□ 1.29
PDCD11-206ENST00000493610 CTTNBP2Q8WZ74 1663 aa23.11■■□□□ 1.29
PDCD11-206ENST00000493610 ADCY10Q96PN6 1610 aa23.09■■□□□ 1.29
PDCD11-206ENST00000493610 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
PDCD11-206ENST00000493610 EEA1Q15075 1411 aa23.06■■□□□ 1.28
PDCD11-206ENST00000493610 KIAA0556O60303 1618 aa23.03■■□□□ 1.28
PDCD11-206ENST00000493610 TNIKQ9UKE5 1360 aa23.02■■□□□ 1.28
PDCD11-206ENST00000493610 CARMIL2Q6F5E8 1435 aa23.02■■□□□ 1.28
PDCD11-206ENST00000493610 PTPRGP23470 1445 aa23.01■■□□□ 1.27
PDCD11-206ENST00000493610 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
PDCD11-206ENST00000493610 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
PDCD11-206ENST00000493610 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
PDCD11-206ENST00000493610 KIF21BO75037 1637 aa22.93■■□□□ 1.26
PDCD11-206ENST00000493610 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
PDCD11-206ENST00000493610 UHRF1BP1LA0JNW5 1464 aa22.91■■□□□ 1.26
PDCD11-206ENST00000493610 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
PDCD11-206ENST00000493610 UACAQ9BZF9 1416 aa22.88■■□□□ 1.25
PDCD11-206ENST00000493610 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
PDCD11-206ENST00000493610 GOLGA3Q08378 1498 aa22.85■■□□□ 1.25
PDCD11-206ENST00000493610 SAMD9Q5K651 1589 aa22.85■■□□□ 1.25
PDCD11-206ENST00000493610 ABCC10Q5T3U5 1492 aa22.84■■□□□ 1.25
PDCD11-206ENST00000493610 DIP2BQ9P265 1576 aa22.83■■□□□ 1.25
PDCD11-206ENST00000493610 ABCA8O94911 1581 aa22.82■■□□□ 1.24
PDCD11-206ENST00000493610 PLB1Q6P1J6 1458 aa22.82■■□□□ 1.24
PDCD11-206ENST00000493610 KDM5BQ9UGL1 1544 aa22.82■■□□□ 1.24
PDCD11-206ENST00000493610 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
PDCD11-206ENST00000493610 ZCCHC11Q5TAX3 1644 aaKnown RBP22.77■■□□□ 1.24
PDCD11-206ENST00000493610 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
PDCD11-206ENST00000493610 P3H3Q8IVL6 736 aa22.74■■□□□ 1.23
PDCD11-206ENST00000493610 FAM69CQ0P6D2 419 aa22.72■■□□□ 1.23
PDCD11-206ENST00000493610 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
PDCD11-206ENST00000493610 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
PDCD11-206ENST00000493610 GLI2P10070 1586 aa22.66■■□□□ 1.22
PDCD11-206ENST00000493610 EPRSP07814 1512 aaKnown RBP22.63■■□□□ 1.21
PDCD11-206ENST00000493610 PPRC1Q5VV67 1664 aaKnown RBP22.63■■□□□ 1.21
PDCD11-206ENST00000493610 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
PDCD11-206ENST00000493610 EFCAB5A4FU69 1503 aa22.62■■□□□ 1.21
PDCD11-206ENST00000493610 ATP10BO94823 1461 aa22.61■■□□□ 1.21
PDCD11-206ENST00000493610 RAPGEF6Q8TEU7 1601 aa22.61■■□□□ 1.21
PDCD11-206ENST00000493610 TSPOAP1O95153 1857 aa22.6■■□□□ 1.21
PDCD11-206ENST00000493610 WDR7Q9Y4E6 1490 aa22.6■■□□□ 1.21
PDCD11-206ENST00000493610 ARHGAP35Q9NRY4 1499 aa22.59■■□□□ 1.21
PDCD11-206ENST00000493610 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.21
PDCD11-206ENST00000493610 MAP3K4Q9Y6R4 1608 aa22.57■■□□□ 1.2
PDCD11-206ENST00000493610 NUP153P49790 1475 aaKnown RBP22.57■■□□□ 1.2
PDCD11-206ENST00000493610 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
PDCD11-206ENST00000493610 CFAP43Q8NDM7 1665 aa22.43■■□□□ 1.18
PDCD11-206ENST00000493610 COL17A1Q9UMD9 1497 aaPredicted RBP22.43■■□□□ 1.18
PDCD11-206ENST00000493610 KDM6BO15054 1643 aa22.42■■□□□ 1.18
PDCD11-206ENST00000493610 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
PDCD11-206ENST00000493610 CDK13Q14004 1512 aaKnown RBP22.39■■□□□ 1.17
PDCD11-206ENST00000493610 MAGI3Q5TCQ9 1506 aa22.39■■□□□ 1.17
PDCD11-206ENST00000493610 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.17
PDCD11-206ENST00000493610 LRRIQ1Q96JM4 1722 aa22.38■■□□□ 1.17
PDCD11-206ENST00000493610 FMN1Q68DA7 1419 aa22.38■■□□□ 1.17
PDCD11-206ENST00000493610 CD109Q6YHK3 1445 aa22.37■■□□□ 1.17
PDCD11-206ENST00000493610 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
PDCD11-206ENST00000493610 HECW1Q76N89 1606 aa22.33■■□□□ 1.17
PDCD11-206ENST00000493610 CLIP1P30622 1438 aa22.31■■□□□ 1.16
PDCD11-206ENST00000493610 PCF11O94913 1555 aaKnown RBP22.3■■□□□ 1.16
PDCD11-206ENST00000493610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
PDCD11-206ENST00000493610 HNRNPUL2Q1KMD3 747 aaKnown RBP22.29■■□□□ 1.16
PDCD11-206ENST00000493610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.27■■□□□ 1.16
PDCD11-206ENST00000493610 CASKIN1Q8WXD9 1431 aa22.26■■□□□ 1.15
PDCD11-206ENST00000493610 PLEKHD1A6NEE1 506 aa22.25■■□□□ 1.15
PDCD11-206ENST00000493610 TTC37Q6PGP7 1564 aa22.25■■□□□ 1.15
PDCD11-206ENST00000493610 LOC105371045A0A1W2PR82 267 aa22.22■■□□□ 1.15
PDCD11-206ENST00000493610 ARAP3Q8WWN8 1544 aa22.21■■□□□ 1.15
PDCD11-206ENST00000493610 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
PDCD11-206ENST00000493610 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
PDCD11-206ENST00000493610 KIF14Q15058 1648 aa22.19■■□□□ 1.14
PDCD11-206ENST00000493610 FYCO1Q9BQS8 1478 aa22.18■■□□□ 1.14
PDCD11-206ENST00000493610 NEO1Q92859 1461 aa22.16■■□□□ 1.14
PDCD11-206ENST00000493610 TROQ12816 1431 aaPredicted RBP22.15■■□□□ 1.14
PDCD11-206ENST00000493610 FRMPD1Q5SYB0 1578 aa22.14■■□□□ 1.13
PDCD11-206ENST00000493610 CCDC18Q5T9S5 1454 aa22.13■■□□□ 1.13
PDCD11-206ENST00000493610 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
PDCD11-206ENST00000493610 PLCH2O75038 1416 aa22.09■■□□□ 1.13
PDCD11-206ENST00000493610 FANCAO15360 1455 aa22.09■■□□□ 1.13
PDCD11-206ENST00000493610 KDM4FA0A1W2PPD8 638 aa22.07■■□□□ 1.12
PDCD11-206ENST00000493610 AKNAQ7Z591 1439 aa22.06■■□□□ 1.12
PDCD11-206ENST00000493610 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
PDCD11-206ENST00000493610 RICTORQ6R327 1708 aa22.06■■□□□ 1.12
PDCD11-206ENST00000493610 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
PDCD11-206ENST00000493610 RAPGEF3O95398 923 aa22.05■■□□□ 1.12
PDCD11-206ENST00000493610 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
PDCD11-206ENST00000493610 CDC42BPBQ9Y5S2 1711 aa22.03■■□□□ 1.12
PDCD11-206ENST00000493610 DENND4BO75064 1496 aaPredicted RBP21.99■■□□□ 1.11
PDCD11-206ENST00000493610 PREX2Q70Z35 1606 aa21.98■■□□□ 1.11
PDCD11-206ENST00000493610 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
PDCD11-206ENST00000493610 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
PDCD11-206ENST00000493610 ZMYM4Q5VZL5 1548 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms