RNA–Protein interactions for RNA: ENST00000493536.5

SNHG16-202, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best)

Gene SNHG16, Length 2,424 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-202ENST00000493536 ADAMTS12P58397 1594 aa13.71□□□□□ -0.21
SNHG16-202ENST00000493536 APLP2Q06481 763 aa13.71□□□□□ -0.22
SNHG16-202ENST00000493536 ARHGAP35Q9NRY4 1499 aa13.7□□□□□ -0.22
SNHG16-202ENST00000493536 ARAP1Q96P48 1450 aa13.69□□□□□ -0.22
SNHG16-202ENST00000493536 SNAPC4Q5SXM2 1469 aa13.69□□□□□ -0.22
SNHG16-202ENST00000493536 TTBK1Q5TCY1 1321 aaPredicted RBP13.68□□□□□ -0.22
SNHG16-202ENST00000493536 MAGI1Q96QZ7 1491 aaPredicted RBP13.65□□□□□ -0.22
SNHG16-202ENST00000493536 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
SNHG16-202ENST00000493536 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
SNHG16-202ENST00000493536 FBLN2P98095 1184 aa13.63□□□□□ -0.23
SNHG16-202ENST00000493536 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
SNHG16-202ENST00000493536 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
SNHG16-202ENST00000493536 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
SNHG16-202ENST00000493536 IQGAP2Q13576 1575 aa13.59□□□□□ -0.23
SNHG16-202ENST00000493536 FHOD3Q2V2M9 1422 aa13.59□□□□□ -0.23
SNHG16-202ENST00000493536 ATP1B4Q9UN42 357 aaPredicted RBP13.56□□□□□ -0.24
SNHG16-202ENST00000493536 SAMD9Q5K651 1589 aa13.55□□□□□ -0.24
SNHG16-202ENST00000493536 KIAA0586Q9BVV6 1533 aa13.54□□□□□ -0.24
SNHG16-202ENST00000493536 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
SNHG16-202ENST00000493536 CEP170Q5SW79 1584 aa13.51□□□□□ -0.25
SNHG16-202ENST00000493536 PCF11O94913 1555 aaKnown RBP13.51□□□□□ -0.25
SNHG16-202ENST00000493536 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
SNHG16-202ENST00000493536 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
SNHG16-202ENST00000493536 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
SNHG16-202ENST00000493536 NUP160Q12769 1436 aa13.48□□□□□ -0.25
SNHG16-202ENST00000493536 CASKIN1Q8WXD9 1431 aa13.48□□□□□ -0.25
SNHG16-202ENST00000493536 TIAM1Q13009 1591 aa13.46□□□□□ -0.25
SNHG16-202ENST00000493536 CHD1O14646 1710 aa13.46□□□□□ -0.25
SNHG16-202ENST00000493536 MAP3K1Q13233 1512 aa13.46□□□□□ -0.26
SNHG16-202ENST00000493536 JPH4Q96JJ6 628 aa13.44□□□□□ -0.26
SNHG16-202ENST00000493536 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
SNHG16-202ENST00000493536 DISP1Q96F81 1524 aa13.43□□□□□ -0.26
SNHG16-202ENST00000493536 CFAP43Q8NDM7 1665 aa13.42□□□□□ -0.26
SNHG16-202ENST00000493536 CARMIL2Q6F5E8 1435 aa13.42□□□□□ -0.26
SNHG16-202ENST00000493536 LRRC9Q6ZRR7 1453 aa13.41□□□□□ -0.26
SNHG16-202ENST00000493536 HECW1Q76N89 1606 aa13.38□□□□□ -0.27
SNHG16-202ENST00000493536 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
SNHG16-202ENST00000493536 MTUS2Q5JR59 1369 aa13.36□□□□□ -0.27
SNHG16-202ENST00000493536 CCDC18Q5T9S5 1454 aa13.35□□□□□ -0.27
SNHG16-202ENST00000493536 PRG4Q92954 1404 aaPredicted RBP13.34□□□□□ -0.27
SNHG16-202ENST00000493536 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
SNHG16-202ENST00000493536 ARID3CA6NKF2 412 aa13.33□□□□□ -0.27
SNHG16-202ENST00000493536 HRCP23327 699 aa13.33□□□□□ -0.27
SNHG16-202ENST00000493536 RAPGEF6Q8TEU7 1601 aa13.32□□□□□ -0.28
SNHG16-202ENST00000493536 EPRSP07814 1512 aaKnown RBP13.32□□□□□ -0.28
SNHG16-202ENST00000493536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
SNHG16-202ENST00000493536 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
SNHG16-202ENST00000493536 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
SNHG16-202ENST00000493536 CDK13Q14004 1512 aaKnown RBP13.29□□□□□ -0.28
SNHG16-202ENST00000493536 PHLDB1Q86UU1 1377 aa13.29□□□□□ -0.28
SNHG16-202ENST00000493536 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
SNHG16-202ENST00000493536 EHBP1L1Q8N3D4 1523 aa13.28□□□□□ -0.28
SNHG16-202ENST00000493536 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
SNHG16-202ENST00000493536 NUP153P49790 1475 aaKnown RBP13.28□□□□□ -0.28
SNHG16-202ENST00000493536 PTPRGP23470 1445 aa13.27□□□□□ -0.29
SNHG16-202ENST00000493536 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
SNHG16-202ENST00000493536 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
SNHG16-202ENST00000493536 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
SNHG16-202ENST00000493536 ITGAEP38570 1179 aa13.25□□□□□ -0.29
SNHG16-202ENST00000493536 FAM50AQ14320 339 aaKnown RBP13.25□□□□□ -0.29
SNHG16-202ENST00000493536 MAGI3Q5TCQ9 1506 aa13.24□□□□□ -0.29
SNHG16-202ENST00000493536 NCOA2Q15596 1464 aa13.24□□□□□ -0.29
SNHG16-202ENST00000493536 CCER1Q8TC90 406 aaPredicted RBP13.24□□□□□ -0.29
SNHG16-202ENST00000493536 ABCA8O94911 1581 aa13.22□□□□□ -0.29
SNHG16-202ENST00000493536 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
SNHG16-202ENST00000493536 ERCC6L2Q5T890 1561 aa13.21□□□□□ -0.29
SNHG16-202ENST00000493536 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.3
SNHG16-202ENST00000493536 MYOM3Q5VTT5 1437 aa13.2□□□□□ -0.3
SNHG16-202ENST00000493536 FGD6Q6ZV73 1430 aa13.2□□□□□ -0.3
SNHG16-202ENST00000493536 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
SNHG16-202ENST00000493536 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
SNHG16-202ENST00000493536 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
SNHG16-202ENST00000493536 TROQ12816 1431 aaPredicted RBP13.16□□□□□ -0.3
SNHG16-202ENST00000493536 ATP10BO94823 1461 aa13.16□□□□□ -0.3
SNHG16-202ENST00000493536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.31e-8■■■□□ 15.3
SNHG16-202ENST00000493536 PTPN23Q9H3S7 1636 aa13.13□□□□□ -0.31
SNHG16-202ENST00000493536 ABCC2Q92887 1545 aa13.13□□□□□ -0.31
SNHG16-202ENST00000493536 MIA2Q96PC5 1412 aa13.11□□□□□ -0.31
SNHG16-202ENST00000493536 KIF14Q15058 1648 aa13.09□□□□□ -0.31
SNHG16-202ENST00000493536 ADCY10Q96PN6 1610 aa13.09□□□□□ -0.31
SNHG16-202ENST00000493536 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
SNHG16-202ENST00000493536 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
SNHG16-202ENST00000493536 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
SNHG16-202ENST00000493536 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
SNHG16-202ENST00000493536 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
SNHG16-202ENST00000493536 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
SNHG16-202ENST00000493536 GPATCH8Q9UKJ3 1502 aaKnown RBP13.05□□□□□ -0.32
SNHG16-202ENST00000493536 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
SNHG16-202ENST00000493536 ZCCHC11Q5TAX3 1644 aaKnown RBP13.04□□□□□ -0.32
SNHG16-202ENST00000493536 KDM5BQ9UGL1 1544 aa13.02□□□□□ -0.32
SNHG16-202ENST00000493536 KCNH8Q96L42 1107 aa13.02□□□□□ -0.32
SNHG16-202ENST00000493536 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.32
SNHG16-202ENST00000493536 ZNF644Q9H582 1327 aaPredicted RBP13.02□□□□□ -0.32
SNHG16-202ENST00000493536 PTPRKQ15262 1439 aa13.02□□□□□ -0.32
SNHG16-202ENST00000493536 CDC42BPAQ5VT25 1732 aa13.02□□□□□ -0.33
SNHG16-202ENST00000493536 ABCC10Q5T3U5 1492 aa13.01□□□□□ -0.33
SNHG16-202ENST00000493536 CAMSAP2Q08AD1 1489 aa13□□□□□ -0.33
SNHG16-202ENST00000493536 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
SNHG16-202ENST00000493536 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
SNHG16-202ENST00000493536 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms