RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
NCKAP1-207ENST00000493359 BAZ1BQ9UIG0 1483 aaKnown RBP11.43□□□□□ -0.58
NCKAP1-207ENST00000493359 SPOCK2Q92563 424 aa11.42□□□□□ -0.58
NCKAP1-207ENST00000493359 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.58
NCKAP1-207ENST00000493359 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
NCKAP1-207ENST00000493359 HMGXB3Q12766 1538 aa11.38□□□□□ -0.59
NCKAP1-207ENST00000493359 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
NCKAP1-207ENST00000493359 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
NCKAP1-207ENST00000493359 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
NCKAP1-207ENST00000493359 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
NCKAP1-207ENST00000493359 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
NCKAP1-207ENST00000493359 CCDC88BA6NC98 1476 aa11.33□□□□□ -0.6
NCKAP1-207ENST00000493359 CC2D2AQ9P2K1 1620 aa11.32□□□□□ -0.6
NCKAP1-207ENST00000493359 POTEHQ6S545 545 aa11.32□□□□□ -0.6
NCKAP1-207ENST00000493359 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
NCKAP1-207ENST00000493359 BCANQ96GW7 911 aa11.31□□□□□ -0.6
NCKAP1-207ENST00000493359 MIER1Q8N108 512 aa11.3□□□□□ -0.6
NCKAP1-207ENST00000493359 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
NCKAP1-207ENST00000493359 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
NCKAP1-207ENST00000493359 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
NCKAP1-207ENST00000493359 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
NCKAP1-207ENST00000493359 PAXIP1Q6ZW49 1069 aaPredicted RBP11.23□□□□□ -0.61
NCKAP1-207ENST00000493359 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
NCKAP1-207ENST00000493359 FXR2P51116 673 aaKnown RBP eCLIP11.22□□□□□ -0.61
NCKAP1-207ENST00000493359 RGL2O15211 777 aa11.18□□□□□ -0.62
NCKAP1-207ENST00000493359 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
NCKAP1-207ENST00000493359 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
NCKAP1-207ENST00000493359 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
NCKAP1-207ENST00000493359 PRKAR2AP13861 404 aaKnown RBP11.15□□□□□ -0.62
NCKAP1-207ENST00000493359 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
NCKAP1-207ENST00000493359 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
NCKAP1-207ENST00000493359 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
NCKAP1-207ENST00000493359 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
NCKAP1-207ENST00000493359 ABCC8Q09428 1581 aa11.1□□□□□ -0.63
NCKAP1-207ENST00000493359 CFTRP13569 1480 aa11.09□□□□□ -0.63
NCKAP1-207ENST00000493359 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
NCKAP1-207ENST00000493359 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
NCKAP1-207ENST00000493359 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
NCKAP1-207ENST00000493359 PRKCSHP14314 528 aaPredicted RBP11.07□□□□□ -0.64
NCKAP1-207ENST00000493359 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
NCKAP1-207ENST00000493359 CADPSQ9ULU8 1353 aa11.05□□□□□ -0.64
NCKAP1-207ENST00000493359 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
NCKAP1-207ENST00000493359 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.65
NCKAP1-207ENST00000493359 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
NCKAP1-207ENST00000493359 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
NCKAP1-207ENST00000493359 BIVM-ERCC5R4GMW8 1640 aa10.98□□□□□ -0.65
NCKAP1-207ENST00000493359 GSE1Q14687 1217 aa10.97□□□□□ -0.65
NCKAP1-207ENST00000493359 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
NCKAP1-207ENST00000493359 TOP2BQ02880 1626 aa10.97□□□□□ -0.65
NCKAP1-207ENST00000493359 FANCD2Q9BXW9 1451 aa10.96□□□□□ -0.65
NCKAP1-207ENST00000493359 TPRNQ4KMQ1 711 aa10.96□□□□□ -0.65
NCKAP1-207ENST00000493359 NESP48681 1621 aa10.95□□□□□ -0.66
NCKAP1-207ENST00000493359 HAX1O00165 279 aa10.94□□□□□ -0.66
NCKAP1-207ENST00000493359 HS6ST3Q8IZP7 471 aa10.93□□□□□ -0.66
NCKAP1-207ENST00000493359 CUX1P39880 1505 aa10.93□□□□□ -0.66
NCKAP1-207ENST00000493359 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
NCKAP1-207ENST00000493359 PDS5BQ9NTI5 1447 aa10.92□□□□□ -0.66
NCKAP1-207ENST00000493359 FAM9AQ8IZU1 332 aaPredicted RBP10.92□□□□□ -0.66
NCKAP1-207ENST00000493359 EEA1Q15075 1411 aa10.92□□□□□ -0.66
NCKAP1-207ENST00000493359 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
NCKAP1-207ENST00000493359 DCAF8Q5TAQ9 597 aa10.9□□□□□ -0.66
NCKAP1-207ENST00000493359 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
NCKAP1-207ENST00000493359 EVX2Q03828 476 aa10.87□□□□□ -0.67
NCKAP1-207ENST00000493359 SOGA1O94964 1423 aa10.86□□□□□ -0.67
NCKAP1-207ENST00000493359 NBR1Q14596 966 aa10.86□□□□□ -0.67
NCKAP1-207ENST00000493359 KIF21AQ7Z4S6 1674 aa10.85□□□□□ -0.67
NCKAP1-207ENST00000493359 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
NCKAP1-207ENST00000493359 NUBP1P53384 320 aa10.85□□□□□ -0.67
NCKAP1-207ENST00000493359 RNF25Q96BH1 459 aaPredicted RBP10.85□□□□□ -0.67
NCKAP1-207ENST00000493359 RIOK3O14730 519 aaKnown RBP10.84□□□□□ -0.67
NCKAP1-207ENST00000493359 FGD5Q6ZNL6 1462 aa10.83□□□□□ -0.68
NCKAP1-207ENST00000493359 TOPBP1Q92547 1522 aa10.83□□□□□ -0.68
NCKAP1-207ENST00000493359 CD44P16070 742 aaKnown RBP10.82□□□□□ -0.68
NCKAP1-207ENST00000493359 FAM212AQ96EL1 285 aa10.82□□□□□ -0.68
NCKAP1-207ENST00000493359 LOC105371045A0A1W2PR82 267 aa10.81□□□□□ -0.68
NCKAP1-207ENST00000493359 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
NCKAP1-207ENST00000493359 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
NCKAP1-207ENST00000493359 URB2Q14146 1524 aaKnown RBP10.79□□□□□ -0.68
NCKAP1-207ENST00000493359 RUSC2Q8N2Y8 1516 aa10.79□□□□□ -0.68
NCKAP1-207ENST00000493359 KIF27Q86VH2 1401 aa10.79□□□□□ -0.68
NCKAP1-207ENST00000493359 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
NCKAP1-207ENST00000493359 STK25O00506 426 aa10.78□□□□□ -0.68
NCKAP1-207ENST00000493359 KIF21BO75037 1637 aa10.77□□□□□ -0.68
NCKAP1-207ENST00000493359 POLA1P09884 1462 aaPredicted RBP10.77□□□□□ -0.69
NCKAP1-207ENST00000493359 GOLGA3Q08378 1498 aa10.77□□□□□ -0.69
NCKAP1-207ENST00000493359 CUX2O14529 1486 aa10.76□□□□□ -0.69
NCKAP1-207ENST00000493359 VGFO15240 615 aaPredicted RBP10.76□□□□□ -0.69
NCKAP1-207ENST00000493359 NKX1-1Q15270 411 aaPredicted RBP10.74□□□□□ -0.69
NCKAP1-207ENST00000493359 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
NCKAP1-207ENST00000493359 ZRANB1Q9UGI0 708 aa10.73□□□□□ -0.69
NCKAP1-207ENST00000493359 WDR62O43379 1518 aa10.73□□□□□ -0.69
NCKAP1-207ENST00000493359 GTPBP6O43824 516 aaPredicted RBP10.72□□□□□ -0.69
NCKAP1-207ENST00000493359 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
NCKAP1-207ENST00000493359 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
NCKAP1-207ENST00000493359 ABCA10Q8WWZ4 1543 aa10.72□□□□□ -0.69
NCKAP1-207ENST00000493359 WDR97A6NE52 1622 aa10.72□□□□□ -0.69
NCKAP1-207ENST00000493359 RAD54L2Q9Y4B4 1467 aa10.71□□□□□ -0.69
NCKAP1-207ENST00000493359 ERICH3Q5RHP9 1530 aa10.7□□□□□ -0.7
NCKAP1-207ENST00000493359 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
NCKAP1-207ENST00000493359 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms