RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 JPH4Q96JJ6 628 aa23.13■■□□□ 1.29
SNED1-212ENST00000493358 IGF1RP08069 1367 aa23.13■■□□□ 1.29
SNED1-212ENST00000493358 KIAA0586Q9BVV6 1533 aa23.08■■□□□ 1.29
SNED1-212ENST00000493358 CARMIL1Q5VZK9 1371 aa23.04■■□□□ 1.28
SNED1-212ENST00000493358 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
SNED1-212ENST00000493358 IQGAP2Q13576 1575 aa22.97■■□□□ 1.27
SNED1-212ENST00000493358 ADCY10Q96PN6 1610 aa22.95■■□□□ 1.26
SNED1-212ENST00000493358 NPM1P06748 294 aaKnown RBP eCLIP22.94■■□□□ 1.26
SNED1-212ENST00000493358 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
SNED1-212ENST00000493358 MAPKBP1O60336 1514 aa22.89■■□□□ 1.26
SNED1-212ENST00000493358 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.25
SNED1-212ENST00000493358 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
SNED1-212ENST00000493358 PTPRGP23470 1445 aa22.83■■□□□ 1.25
SNED1-212ENST00000493358 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
SNED1-212ENST00000493358 DIP2BQ9P265 1576 aa22.81■■□□□ 1.24
SNED1-212ENST00000493358 TTBK1Q5TCY1 1321 aaPredicted RBP22.81■■□□□ 1.24
SNED1-212ENST00000493358 ABCC10Q5T3U5 1492 aa22.8■■□□□ 1.24
SNED1-212ENST00000493358 TSPOAP1O95153 1857 aa22.78■■□□□ 1.24
SNED1-212ENST00000493358 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
SNED1-212ENST00000493358 FAM69CQ0P6D2 419 aa22.76■■□□□ 1.23
SNED1-212ENST00000493358 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
SNED1-212ENST00000493358 DISP1Q96F81 1524 aa22.74■■□□□ 1.23
SNED1-212ENST00000493358 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
SNED1-212ENST00000493358 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
SNED1-212ENST00000493358 UHRF1BP1LA0JNW5 1464 aa22.69■■□□□ 1.22
SNED1-212ENST00000493358 UACAQ9BZF9 1416 aa22.67■■□□□ 1.22
SNED1-212ENST00000493358 GOLGA3Q08378 1498 aa22.66■■□□□ 1.22
SNED1-212ENST00000493358 PLB1Q6P1J6 1458 aa22.64■■□□□ 1.21
SNED1-212ENST00000493358 PRXQ9BXM0 1461 aa22.64■■□□□ 1.21
SNED1-212ENST00000493358 KDM6BO15054 1643 aa22.63■■□□□ 1.21
SNED1-212ENST00000493358 ZCCHC11Q5TAX3 1644 aaKnown RBP22.63■■□□□ 1.21
SNED1-212ENST00000493358 ASXL2Q76L83 1435 aa22.61■■□□□ 1.21
SNED1-212ENST00000493358 GLI2P10070 1586 aa22.58■■□□□ 1.2
SNED1-212ENST00000493358 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
SNED1-212ENST00000493358 EEA1Q15075 1411 aa22.53■■□□□ 1.2
SNED1-212ENST00000493358 FAM9AQ8IZU1 332 aaPredicted RBP22.52■■□□□ 1.2
SNED1-212ENST00000493358 PPRC1Q5VV67 1664 aaKnown RBP22.52■■□□□ 1.2
SNED1-212ENST00000493358 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
SNED1-212ENST00000493358 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
SNED1-212ENST00000493358 EPRSP07814 1512 aaKnown RBP22.48■■□□□ 1.19
SNED1-212ENST00000493358 ABCA8O94911 1581 aa22.48■■□□□ 1.19
SNED1-212ENST00000493358 WDR7Q9Y4E6 1490 aa22.45■■□□□ 1.18
SNED1-212ENST00000493358 TEX14Q8IWB6 1497 aa22.43■■□□□ 1.18
SNED1-212ENST00000493358 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
SNED1-212ENST00000493358 CFAP43Q8NDM7 1665 aa22.42■■□□□ 1.18
SNED1-212ENST00000493358 KIF21BO75037 1637 aa22.37■■□□□ 1.17
SNED1-212ENST00000493358 RAPGEF6Q8TEU7 1601 aa22.35■■□□□ 1.17
SNED1-212ENST00000493358 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
SNED1-212ENST00000493358 KCNH8Q96L42 1107 aa22.28■■□□□ 1.16
SNED1-212ENST00000493358 CD109Q6YHK3 1445 aa22.27■■□□□ 1.16
SNED1-212ENST00000493358 EFCAB5A4FU69 1503 aa22.26■■□□□ 1.15
SNED1-212ENST00000493358 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
SNED1-212ENST00000493358 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
SNED1-212ENST00000493358 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
SNED1-212ENST00000493358 ATP10BO94823 1461 aa22.24■■□□□ 1.15
SNED1-212ENST00000493358 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
SNED1-212ENST00000493358 ABCA9Q8IUA7 1624 aa22.2■■□□□ 1.15
SNED1-212ENST00000493358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
SNED1-212ENST00000493358 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
SNED1-212ENST00000493358 COL17A1Q9UMD9 1497 aaPredicted RBP22.2■■□□□ 1.14
SNED1-212ENST00000493358 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
SNED1-212ENST00000493358 NUP153P49790 1475 aaKnown RBP22.15■■□□□ 1.14
SNED1-212ENST00000493358 KDM4FA0A1W2PPD8 638 aa22.13■■□□□ 1.13
SNED1-212ENST00000493358 UBTFP17480 764 aaKnown RBP22.13■■□□□ 1.13
SNED1-212ENST00000493358 ADGRL1O94910 1474 aa22.12■■□□□ 1.13
SNED1-212ENST00000493358 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
SNED1-212ENST00000493358 ARAP3Q8WWN8 1544 aa22.07■■□□□ 1.12
SNED1-212ENST00000493358 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
SNED1-212ENST00000493358 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
SNED1-212ENST00000493358 CFAP74Q9C0B2 1584 aa22.05■■□□□ 1.12
SNED1-212ENST00000493358 NEO1Q92859 1461 aa22.04■■□□□ 1.12
SNED1-212ENST00000493358 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
SNED1-212ENST00000493358 FMN1Q68DA7 1419 aa22.03■■□□□ 1.12
SNED1-212ENST00000493358 CDK13Q14004 1512 aaKnown RBP21.99■■□□□ 1.11
SNED1-212ENST00000493358 ARHGAP35Q9NRY4 1499 aa21.97■■□□□ 1.11
SNED1-212ENST00000493358 TTC37Q6PGP7 1564 aa21.97■■□□□ 1.11
SNED1-212ENST00000493358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNED1-212ENST00000493358 ATP1B4Q9UN42 357 aaPredicted RBP21.95■■□□□ 1.1
SNED1-212ENST00000493358 MYO5CQ9NQX4 1742 aa21.94■■□□□ 1.1
SNED1-212ENST00000493358 RICTORQ6R327 1708 aa21.93■■□□□ 1.1
SNED1-212ENST00000493358 FRMPD1Q5SYB0 1578 aa21.91■■□□□ 1.1
SNED1-212ENST00000493358 FANCAO15360 1455 aa21.91■■□□□ 1.1
SNED1-212ENST00000493358 LRRIQ1Q96JM4 1722 aa21.89■■□□□ 1.1
SNED1-212ENST00000493358 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
SNED1-212ENST00000493358 KIF14Q15058 1648 aa21.88■■□□□ 1.09
SNED1-212ENST00000493358 RAPGEF3O95398 923 aa21.88■■□□□ 1.09
SNED1-212ENST00000493358 DENND4BO75064 1496 aaPredicted RBP21.88■■□□□ 1.09
SNED1-212ENST00000493358 AKNAQ7Z591 1439 aa21.87■■□□□ 1.09
SNED1-212ENST00000493358 ARHGEF40Q8TER5 1519 aa21.86■■□□□ 1.09
SNED1-212ENST00000493358 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.09
SNED1-212ENST00000493358 CLIP1P30622 1438 aa21.83■■□□□ 1.09
SNED1-212ENST00000493358 BCORL1Q5H9F3 1711 aa21.82■■□□□ 1.08
SNED1-212ENST00000493358 ADAMTSL3P82987 1691 aa21.81■■□□□ 1.08
SNED1-212ENST00000493358 ZMYM4Q5VZL5 1548 aa21.8■■□□□ 1.08
SNED1-212ENST00000493358 HECW2Q9P2P5 1572 aa21.8■■□□□ 1.08
SNED1-212ENST00000493358 CCDC18Q5T9S5 1454 aa21.8■■□□□ 1.08
SNED1-212ENST00000493358 PLCH2O75038 1416 aa21.79■■□□□ 1.08
SNED1-212ENST00000493358 TROQ12816 1431 aaPredicted RBP21.79■■□□□ 1.08
SNED1-212ENST00000493358 ARID4BQ4LE39 1312 aaPredicted RBP21.79■■□□□ 1.08
SNED1-212ENST00000493358 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms