RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 TRIM52Q96A61 297 aa9.16□□□□□ -0.94
NF1-215ENST00000493220 CUX1P39880 1505 aa9.14□□□□□ -0.95
NF1-215ENST00000493220 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
NF1-215ENST00000493220 POLA1P09884 1462 aaPredicted RBP9.13□□□□□ -0.95
NF1-215ENST00000493220 ACIN1Q9UKV3 1341 aaKnown RBP9.13□□□□□ -0.95
NF1-215ENST00000493220 AQRO60306 1485 aaKnown RBP eCLIP9.12□□□□□ -0.952e-6■■■■■ 30.4
NF1-215ENST00000493220 SYNJ1O43426 1573 aa9.12□□□□□ -0.95
NF1-215ENST00000493220 KCNH8Q96L42 1107 aa9.11□□□□□ -0.95
NF1-215ENST00000493220 TSPY4P0CV99 314 aa9.1□□□□□ -0.95
NF1-215ENST00000493220 TSPY10P0CW01 314 aa9.1□□□□□ -0.95
NF1-215ENST00000493220 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
NF1-215ENST00000493220 DAXXQ9UER7 740 aaPredicted RBP9.09□□□□□ -0.95
NF1-215ENST00000493220 ABCA10Q8WWZ4 1543 aa9.09□□□□□ -0.95
NF1-215ENST00000493220 IGF1RP08069 1367 aa9.08□□□□□ -0.96
NF1-215ENST00000493220 PRDM2Q13029 1718 aa9.08□□□□□ -0.96
NF1-215ENST00000493220 SNAPC4Q5SXM2 1469 aa9.08□□□□□ -0.96
NF1-215ENST00000493220 URB2Q14146 1524 aaKnown RBP9.07□□□□□ -0.96
NF1-215ENST00000493220 TRHP20396 242 aaPredicted RBP9.06□□□□□ -0.96
NF1-215ENST00000493220 CUL7Q14999 1698 aa9.06□□□□□ -0.96
NF1-215ENST00000493220 BIVM-ERCC5R4GMW8 1640 aa9.06□□□□□ -0.96
NF1-215ENST00000493220 MAGI1Q96QZ7 1491 aaPredicted RBP9.06□□□□□ -0.96
NF1-215ENST00000493220 ERICH3Q5RHP9 1530 aa9.06□□□□□ -0.96
NF1-215ENST00000493220 CCNB3Q8WWL7 1395 aa9.05□□□□□ -0.96
NF1-215ENST00000493220 PTPRGP23470 1445 aa9.05□□□□□ -0.96
NF1-215ENST00000493220 CFDP1Q9UEE9 299 aaPredicted RBP9.04□□□□□ -0.96
NF1-215ENST00000493220 KIF21BO75037 1637 aa9.04□□□□□ -0.96
NF1-215ENST00000493220 SYNJ2O15056 1496 aa9.03□□□□□ -0.96
NF1-215ENST00000493220 KIF21AQ7Z4S6 1674 aa9.03□□□□□ -0.96
NF1-215ENST00000493220 WDR62O43379 1518 aa9.03□□□□□ -0.96
NF1-215ENST00000493220 VPS8Q8N3P4 1428 aa9.02□□□□□ -0.97
NF1-215ENST00000493220 WDR97A6NE52 1622 aa9□□□□□ -0.97
NF1-215ENST00000493220 CCDC18Q5T9S5 1454 aa9□□□□□ -0.97
NF1-215ENST00000493220 STAG3Q9UJ98 1225 aa8.99□□□□□ -0.97
NF1-215ENST00000493220 RUSC2Q8N2Y8 1516 aa8.99□□□□□ -0.97
NF1-215ENST00000493220 FHOD3Q2V2M9 1422 aa8.99□□□□□ -0.97
NF1-215ENST00000493220 EFCAB5A4FU69 1503 aa8.99□□□□□ -0.97
NF1-215ENST00000493220 ARHGAP35Q9NRY4 1499 aa8.99□□□□□ -0.97
NF1-215ENST00000493220 BCANQ96GW7 911 aa8.98□□□□□ -0.97
NF1-215ENST00000493220 PRG4Q92954 1404 aaPredicted RBP8.97□□□□□ -0.97
NF1-215ENST00000493220 ARID4BQ4LE39 1312 aaPredicted RBP8.97□□□□□ -0.97
NF1-215ENST00000493220 CYB5RLQ6IPT4 315 aa8.95□□□□□ -0.98
NF1-215ENST00000493220 KIAA0586Q9BVV6 1533 aa8.95□□□□□ -0.98
NF1-215ENST00000493220 GRIN2AQ12879 1464 aa8.95□□□□□ -0.98
NF1-215ENST00000493220 EFCAB2Q5VUJ9 269 aa8.95□□□□□ -0.98
NF1-215ENST00000493220 CHIC2Q9UKJ5 165 aa8.95□□□□□ -0.98
NF1-215ENST00000493220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.94□□□□□ -0.981e-7■■■■□ 20.8
NF1-215ENST00000493220 KANK1Q14678 1352 aa8.93□□□□□ -0.98
NF1-215ENST00000493220 IQGAP2Q13576 1575 aa8.93□□□□□ -0.98
NF1-215ENST00000493220 PRXQ9BXM0 1461 aa8.93□□□□□ -0.98
NF1-215ENST00000493220 NEUROD1Q13562 356 aa8.93□□□□□ -0.98
NF1-215ENST00000493220 RSPH4AQ5TD94 716 aa8.92□□□□□ -0.98
NF1-215ENST00000493220 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.98
NF1-215ENST00000493220 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.99
NF1-215ENST00000493220 POLR3GLQ9BT43 218 aa8.89□□□□□ -0.99
NF1-215ENST00000493220 HECW1Q76N89 1606 aa8.89□□□□□ -0.99
NF1-215ENST00000493220 PLPPR3Q6T4P5 718 aa8.89□□□□□ -0.99
NF1-215ENST00000493220 EIF4G3O43432 1585 aaKnown RBP8.89□□□□□ -0.99
NF1-215ENST00000493220 CASKIN1Q8WXD9 1431 aa8.88□□□□□ -0.99
NF1-215ENST00000493220 FYCO1Q9BQS8 1478 aa8.88□□□□□ -0.99
NF1-215ENST00000493220 SLC4A1APQ9BWU0 796 aaKnown RBP8.88□□□□□ -0.99
NF1-215ENST00000493220 ZNF326Q5BKZ1 582 aaKnown RBP8.87□□□□□ -0.99
NF1-215ENST00000493220 ADAMTS12P58397 1594 aa8.87□□□□□ -0.99
NF1-215ENST00000493220 RRP7BPQ9NSQ0 103 aa8.87□□□□□ -0.99
NF1-215ENST00000493220 PBRM1Q86U86 1689 aa8.86□□□□□ -0.99
NF1-215ENST00000493220 EIF5BO60841 1220 aaKnown RBP8.86□□□□□ -0.99
NF1-215ENST00000493220 TONSLQ96HA7 1378 aa8.86□□□□□ -0.99
NF1-215ENST00000493220 ANKRD30AQ9BXX3 1397 aa8.85□□□□□ -0.99
NF1-215ENST00000493220 UACAQ9BZF9 1416 aa8.84□□□□□ -0.99
NF1-215ENST00000493220 FAM69CQ0P6D2 419 aa8.84□□□□□ -0.99
NF1-215ENST00000493220 THOC2Q8NI27 1593 aaKnown RBP8.83□□□□□ -1
NF1-215ENST00000493220 PPP1R15AO75807 674 aaPredicted RBP8.83□□□□□ -1
NF1-215ENST00000493220 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
NF1-215ENST00000493220 SPAG9O60271 1321 aaKnown RBP8.82□□□□□ -1
NF1-215ENST00000493220 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
NF1-215ENST00000493220 EHBP1L1Q8N3D4 1523 aa8.81□□□□□ -1
NF1-215ENST00000493220 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
NF1-215ENST00000493220 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
NF1-215ENST00000493220 PLEKHH2Q8IVE3 1493 aa8.8□□□□□ -1
NF1-215ENST00000493220 KANK4Q5T7N3 995 aaPredicted RBP8.79□□□□□ -1
NF1-215ENST00000493220 ARHGAP5Q13017 1502 aa8.78□□□□□ -1
NF1-215ENST00000493220 PRKCSHP14314 528 aaPredicted RBP8.78□□□□□ -1
NF1-215ENST00000493220 HRCP23327 699 aa8.78□□□□□ -1
NF1-215ENST00000493220 TARBP1Q13395 1621 aaKnown RBP8.78□□□□□ -1
NF1-215ENST00000493220 CENPBP07199 599 aaPredicted RBP8.78□□□□□ -1
NF1-215ENST00000493220 HNRNPMP52272 730 aaKnown RBP eCLIP8.77□□□□□ -1.017e-7■■■■■ 30.6
NF1-215ENST00000493220 ARAP1Q96P48 1450 aa8.76□□□□□ -1.01
NF1-215ENST00000493220 MYOM3Q5VTT5 1437 aa8.76□□□□□ -1.01
NF1-215ENST00000493220 SETD5Q9C0A6 1442 aa8.76□□□□□ -1.01
NF1-215ENST00000493220 MLECQ14165 292 aa8.76□□□□□ -1.01
NF1-215ENST00000493220 LRRC9Q6ZRR7 1453 aa8.75□□□□□ -1.01
NF1-215ENST00000493220 TROQ12816 1431 aaPredicted RBP8.75□□□□□ -1.01
NF1-215ENST00000493220 UGGT2Q9NYU1 1516 aa8.75□□□□□ -1.01
NF1-215ENST00000493220 KIF14Q15058 1648 aa8.74□□□□□ -1.01
NF1-215ENST00000493220 PLB1Q6P1J6 1458 aa8.74□□□□□ -1.01
NF1-215ENST00000493220 NUP160Q12769 1436 aa8.74□□□□□ -1.01
NF1-215ENST00000493220 GGT6Q6P531 493 aa8.74□□□□□ -1.01
NF1-215ENST00000493220 AMER1Q5JTC6 1135 aaPredicted RBP8.74□□□□□ -1.01
NF1-215ENST00000493220 SUPT6HQ7KZ85 1726 aaKnown RBP8.73□□□□□ -1.01
NF1-215ENST00000493220 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
NF1-215ENST00000493220 EPRSP07814 1512 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms