RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 JPH4Q96JJ6 628 aa35.52■■■■□ 3.28
CLTA-208ENST00000493185 PRG4Q92954 1404 aaPredicted RBP35.51■■■■□ 3.28
CLTA-208ENST00000493185 CARMIL1Q5VZK9 1371 aa35.39■■■■□ 3.26
CLTA-208ENST00000493185 KIAA0586Q9BVV6 1533 aa35.39■■■■□ 3.26
CLTA-208ENST00000493185 IQGAP2Q13576 1575 aa35.13■■■■□ 3.21
CLTA-208ENST00000493185 RAPGEF2Q9Y4G8 1499 aa35.11■■■■□ 3.21
CLTA-208ENST00000493185 NPM1P06748 294 aaKnown RBP eCLIP35.09■■■■□ 3.21
CLTA-208ENST00000493185 CARMIL2Q6F5E8 1435 aa35.06■■■■□ 3.2
CLTA-208ENST00000493185 ADCY10Q96PN6 1610 aa35.06■■■■□ 3.2
CLTA-208ENST00000493185 PTPRGP23470 1445 aa35.01■■■■□ 3.2
CLTA-208ENST00000493185 KIF13AQ9H1H9 1805 aa35■■■■□ 3.19
CLTA-208ENST00000493185 TNIKQ9UKE5 1360 aa34.98■■■■□ 3.19
CLTA-208ENST00000493185 MAPKBP1O60336 1514 aa34.97■■■■□ 3.19
CLTA-208ENST00000493185 TTBK1Q5TCY1 1321 aaPredicted RBP34.94■■■■□ 3.18
CLTA-208ENST00000493185 UGGT2Q9NYU1 1516 aa34.9■■■■□ 3.18
CLTA-208ENST00000493185 DISP1Q96F81 1524 aa34.89■■■■□ 3.18
CLTA-208ENST00000493185 ABCC10Q5T3U5 1492 aa34.89■■■■□ 3.18
CLTA-208ENST00000493185 FAM69CQ0P6D2 419 aa34.85■■■■□ 3.17
CLTA-208ENST00000493185 CTTNBP2Q8WZ74 1663 aa34.85■■■■□ 3.17
CLTA-208ENST00000493185 DIP2BQ9P265 1576 aa34.82■■■■□ 3.16
CLTA-208ENST00000493185 PRXQ9BXM0 1461 aa34.81■■■■□ 3.16
CLTA-208ENST00000493185 KIAA0556O60303 1618 aa34.79■■■■□ 3.16
CLTA-208ENST00000493185 ABCC2Q92887 1545 aa34.78■■■■□ 3.16
CLTA-208ENST00000493185 UACAQ9BZF9 1416 aa34.75■■■■□ 3.15
CLTA-208ENST00000493185 UHRF1BP1LA0JNW5 1464 aa34.75■■■■□ 3.15
CLTA-208ENST00000493185 GOLGA3Q08378 1498 aa34.67■■■■□ 3.14
CLTA-208ENST00000493185 CSRNP3Q8WYN3 585 aa34.63■■■■□ 3.13
CLTA-208ENST00000493185 PLB1Q6P1J6 1458 aa34.63■■■■□ 3.13
CLTA-208ENST00000493185 ASXL2Q76L83 1435 aa34.63■■■■□ 3.13
CLTA-208ENST00000493185 TSPOAP1O95153 1857 aa34.6■■■■□ 3.13
CLTA-208ENST00000493185 KDM5BQ9UGL1 1544 aa34.59■■■■□ 3.13
CLTA-208ENST00000493185 EEA1Q15075 1411 aa34.58■■■■□ 3.13
CLTA-208ENST00000493185 ZCCHC11Q5TAX3 1644 aaKnown RBP34.54■■■■□ 3.12
CLTA-208ENST00000493185 GLI2P10070 1586 aa34.5■■■■□ 3.11
CLTA-208ENST00000493185 KDM6BO15054 1643 aa34.45■■■■□ 3.11
CLTA-208ENST00000493185 ABCA8O94911 1581 aa34.44■■■■□ 3.1
CLTA-208ENST00000493185 AEBP2Q6ZN18 517 aaPredicted RBP34.42■■■■□ 3.1
CLTA-208ENST00000493185 EPRSP07814 1512 aaKnown RBP34.41■■■■□ 3.1
CLTA-208ENST00000493185 FAM9AQ8IZU1 332 aaPredicted RBP34.41■■■■□ 3.1
CLTA-208ENST00000493185 WDR7Q9Y4E6 1490 aa34.36■■■■□ 3.09
CLTA-208ENST00000493185 PPRC1Q5VV67 1664 aaKnown RBP34.35■■■■□ 3.09
CLTA-208ENST00000493185 P3H3Q8IVL6 736 aa34.35■■■■□ 3.09
CLTA-208ENST00000493185 SAMD9Q5K651 1589 aa34.33■■■■□ 3.09
CLTA-208ENST00000493185 MAP3K4Q9Y6R4 1608 aa34.32■■■■□ 3.08
CLTA-208ENST00000493185 KIF21BO75037 1637 aa34.28■■■■□ 3.08
CLTA-208ENST00000493185 CHIC1Q5VXU3 224 aa34.24■■■■□ 3.07
CLTA-208ENST00000493185 TEX14Q8IWB6 1497 aa34.24■■■■□ 3.07
CLTA-208ENST00000493185 RANGAP1P46060 587 aaPredicted RBP34.19■■■■□ 3.06
CLTA-208ENST00000493185 KCNH8Q96L42 1107 aa34.17■■■■□ 3.06
CLTA-208ENST00000493185 RAPGEF6Q8TEU7 1601 aa34.15■■■■□ 3.06
CLTA-208ENST00000493185 ARID3CA6NKF2 412 aa34.15■■■■□ 3.06
CLTA-208ENST00000493185 CFAP43Q8NDM7 1665 aa34.15■■■■□ 3.06
CLTA-208ENST00000493185 ATP10BO94823 1461 aa34.14■■■■□ 3.06
CLTA-208ENST00000493185 CD109Q6YHK3 1445 aa34.11■■■■□ 3.05
CLTA-208ENST00000493185 FHOD3Q2V2M9 1422 aa34.1■■■■□ 3.05
CLTA-208ENST00000493185 EFCAB5A4FU69 1503 aa34.09■■■■□ 3.05
CLTA-208ENST00000493185 MAGI3Q5TCQ9 1506 aa34.06■■■■□ 3.04
CLTA-208ENST00000493185 COL17A1Q9UMD9 1497 aaPredicted RBP34.06■■■■□ 3.04
CLTA-208ENST00000493185 UBTFP17480 764 aaKnown RBP34.01■■■■□ 3.03
CLTA-208ENST00000493185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34■■■■□ 3.03
CLTA-208ENST00000493185 HNRNPUL2Q1KMD3 747 aaKnown RBP34■■■■□ 3.03
CLTA-208ENST00000493185 EHMT2Q96KQ7 1210 aa34■■■■□ 3.03
CLTA-208ENST00000493185 NUP153P49790 1475 aaKnown RBP34■■■■□ 3.03
CLTA-208ENST00000493185 ABCA9Q8IUA7 1624 aa33.93■■■■□ 3.02
CLTA-208ENST00000493185 KDM4FA0A1W2PPD8 638 aa33.9■■■■□ 3.02
CLTA-208ENST00000493185 PLEKHD1A6NEE1 506 aa33.82■■■■□ 3
CLTA-208ENST00000493185 PHLDB1Q86UU1 1377 aa33.79■■■■□ 3
CLTA-208ENST00000493185 ARAP3Q8WWN8 1544 aa33.79■■■■□ 3
CLTA-208ENST00000493185 ARHGAP35Q9NRY4 1499 aa33.78■■■■□ 3
CLTA-208ENST00000493185 FMN1Q68DA7 1419 aa33.78■■■■□ 3
CLTA-208ENST00000493185 ADGRL1O94910 1474 aa33.76■■■■□ 3
CLTA-208ENST00000493185 NEO1Q92859 1461 aa33.73■■■□□ 2.99
CLTA-208ENST00000493185 CDK13Q14004 1512 aaKnown RBP33.71■■■□□ 2.99
CLTA-208ENST00000493185 HECW1Q76N89 1606 aa33.7■■■□□ 2.99
CLTA-208ENST00000493185 ATP1B4Q9UN42 357 aaPredicted RBP33.67■■■□□ 2.98
CLTA-208ENST00000493185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.64■■■□□ 2.98
CLTA-208ENST00000493185 TTC37Q6PGP7 1564 aa33.59■■■□□ 2.97
CLTA-208ENST00000493185 CFAP74Q9C0B2 1584 aa33.59■■■□□ 2.97
CLTA-208ENST00000493185 RAPGEF3O95398 923 aa33.58■■■□□ 2.97
CLTA-208ENST00000493185 CDK11AQ9UQ88 783 aaPredicted RBP33.56■■■□□ 2.96
CLTA-208ENST00000493185 FANCAO15360 1455 aa33.55■■■□□ 2.96
CLTA-208ENST00000493185 AKNAQ7Z591 1439 aa33.52■■■□□ 2.96
CLTA-208ENST00000493185 FRMPD1Q5SYB0 1578 aa33.51■■■□□ 2.96
CLTA-208ENST00000493185 DENND4BO75064 1496 aaPredicted RBP33.49■■■□□ 2.95
CLTA-208ENST00000493185 LRRIQ1Q96JM4 1722 aa33.45■■■□□ 2.95
CLTA-208ENST00000493185 RICTORQ6R327 1708 aa33.45■■■□□ 2.94
CLTA-208ENST00000493185 PLCH2O75038 1416 aa33.44■■■□□ 2.94
CLTA-208ENST00000493185 KIF14Q15058 1648 aa33.43■■■□□ 2.94
CLTA-208ENST00000493185 TROQ12816 1431 aaPredicted RBP33.43■■■□□ 2.94
CLTA-208ENST00000493185 PCF11O94913 1555 aaKnown RBP33.43■■■□□ 2.94
CLTA-208ENST00000493185 CLIP1P30622 1438 aa33.42■■■□□ 2.94
CLTA-208ENST00000493185 CASKIN1Q8WXD9 1431 aa33.42■■■□□ 2.94
CLTA-208ENST00000493185 MYO5CQ9NQX4 1742 aa33.42■■■□□ 2.94
CLTA-208ENST00000493185 CCDC18Q5T9S5 1454 aa33.38■■■□□ 2.93
CLTA-208ENST00000493185 ARHGEF40Q8TER5 1519 aa33.36■■■□□ 2.93
CLTA-208ENST00000493185 ZMYM4Q5VZL5 1548 aa33.33■■■□□ 2.93
CLTA-208ENST00000493185 FYCO1Q9BQS8 1478 aa33.32■■■□□ 2.92
CLTA-208ENST00000493185 EFCAB2Q5VUJ9 269 aa33.32■■■□□ 2.92
CLTA-208ENST00000493185 SCAPERQ9BY12 1400 aa33.3■■■□□ 2.92
CLTA-208ENST00000493185 ARID4BQ4LE39 1312 aaPredicted RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms