RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ARAP1Q96P48 1450 aa21.39■■□□□ 1.02
CLIP2-209ENST00000493166 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.01
CLIP2-209ENST00000493166 CTTNBP2Q8WZ74 1663 aa21.38■■□□□ 1.01
CLIP2-209ENST00000493166 ERCC6L2Q5T890 1561 aa21.37■■□□□ 1.01
CLIP2-209ENST00000493166 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
CLIP2-209ENST00000493166 IQGAP2Q13576 1575 aa21.35■■□□□ 1.01
CLIP2-209ENST00000493166 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1.01
CLIP2-209ENST00000493166 JPH4Q96JJ6 628 aa21.32■■□□□ 1
CLIP2-209ENST00000493166 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
CLIP2-209ENST00000493166 PRG4Q92954 1404 aaPredicted RBP21.3■■□□□ 1
CLIP2-209ENST00000493166 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
CLIP2-209ENST00000493166 KIF21BO75037 1637 aa21.25■□□□□ 0.99
CLIP2-209ENST00000493166 UGGT2Q9NYU1 1516 aa21.19■□□□□ 0.98
CLIP2-209ENST00000493166 CARMIL2Q6F5E8 1435 aa21.17■□□□□ 0.98
CLIP2-209ENST00000493166 KIAA0556O60303 1618 aa21.14■□□□□ 0.97
CLIP2-209ENST00000493166 DISP1Q96F81 1524 aa21.14■□□□□ 0.97
CLIP2-209ENST00000493166 GOLGA3Q08378 1498 aa21.09■□□□□ 0.97
CLIP2-209ENST00000493166 TNIKQ9UKE5 1360 aa21.08■□□□□ 0.96
CLIP2-209ENST00000493166 PTPRGP23470 1445 aa21.05■□□□□ 0.96
CLIP2-209ENST00000493166 ADCY10Q96PN6 1610 aa21.05■□□□□ 0.96
CLIP2-209ENST00000493166 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
CLIP2-209ENST00000493166 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
CLIP2-209ENST00000493166 SAMD9Q5K651 1589 aa21.02■□□□□ 0.96
CLIP2-209ENST00000493166 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
CLIP2-209ENST00000493166 RANGAP1P46060 587 aaPredicted RBP20.94■□□□□ 0.94
CLIP2-209ENST00000493166 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
CLIP2-209ENST00000493166 UACAQ9BZF9 1416 aa20.93■□□□□ 0.94
CLIP2-209ENST00000493166 ABCC2Q92887 1545 aa20.93■□□□□ 0.94
CLIP2-209ENST00000493166 UHRF1BP1LA0JNW5 1464 aa20.91■□□□□ 0.94
CLIP2-209ENST00000493166 P3H3Q8IVL6 736 aa20.91■□□□□ 0.94
CLIP2-209ENST00000493166 NPM1P06748 294 aaKnown RBP eCLIP20.9■□□□□ 0.94
CLIP2-209ENST00000493166 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
CLIP2-209ENST00000493166 ABCA8O94911 1581 aa20.88■□□□□ 0.93
CLIP2-209ENST00000493166 MAPKBP1O60336 1514 aa20.88■□□□□ 0.93
CLIP2-209ENST00000493166 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
CLIP2-209ENST00000493166 FHOD3Q2V2M9 1422 aa20.86■□□□□ 0.93
CLIP2-209ENST00000493166 ZCCHC11Q5TAX3 1644 aaKnown RBP20.86■□□□□ 0.93
CLIP2-209ENST00000493166 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
CLIP2-209ENST00000493166 RAPGEF6Q8TEU7 1601 aa20.82■□□□□ 0.92
CLIP2-209ENST00000493166 KDM5BQ9UGL1 1544 aa20.82■□□□□ 0.92
CLIP2-209ENST00000493166 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
CLIP2-209ENST00000493166 DIP2BQ9P265 1576 aa20.76■□□□□ 0.91
CLIP2-209ENST00000493166 ASXL2Q76L83 1435 aa20.74■□□□□ 0.91
CLIP2-209ENST00000493166 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
CLIP2-209ENST00000493166 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
CLIP2-209ENST00000493166 CLIP1P30622 1438 aa20.69■□□□□ 0.9
CLIP2-209ENST00000493166 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
CLIP2-209ENST00000493166 TSPOAP1O95153 1857 aa20.68■□□□□ 0.9
CLIP2-209ENST00000493166 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
CLIP2-209ENST00000493166 ATP10BO94823 1461 aa20.67■□□□□ 0.9
CLIP2-209ENST00000493166 FAM69CQ0P6D2 419 aa20.66■□□□□ 0.9
CLIP2-209ENST00000493166 WDR7Q9Y4E6 1490 aa20.66■□□□□ 0.9
CLIP2-209ENST00000493166 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
CLIP2-209ENST00000493166 GLI2P10070 1586 aa20.63■□□□□ 0.89
CLIP2-209ENST00000493166 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
CLIP2-209ENST00000493166 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
CLIP2-209ENST00000493166 EPRSP07814 1512 aaKnown RBP20.62■□□□□ 0.89
CLIP2-209ENST00000493166 LRRIQ1Q96JM4 1722 aa20.61■□□□□ 0.89
CLIP2-209ENST00000493166 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
CLIP2-209ENST00000493166 MAP3K4Q9Y6R4 1608 aa20.6■□□□□ 0.89
CLIP2-209ENST00000493166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
CLIP2-209ENST00000493166 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
CLIP2-209ENST00000493166 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
CLIP2-209ENST00000493166 CFAP43Q8NDM7 1665 aa20.57■□□□□ 0.88
CLIP2-209ENST00000493166 CDK13Q14004 1512 aaKnown RBP20.57■□□□□ 0.88
CLIP2-209ENST00000493166 PPRC1Q5VV67 1664 aaKnown RBP20.55■□□□□ 0.88
CLIP2-209ENST00000493166 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
CLIP2-209ENST00000493166 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
CLIP2-209ENST00000493166 FYCO1Q9BQS8 1478 aa20.53■□□□□ 0.88
CLIP2-209ENST00000493166 ABCA9Q8IUA7 1624 aa20.49■□□□□ 0.87
CLIP2-209ENST00000493166 CCDC18Q5T9S5 1454 aa20.49■□□□□ 0.87
CLIP2-209ENST00000493166 PLEKHD1A6NEE1 506 aa20.47■□□□□ 0.87
CLIP2-209ENST00000493166 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
CLIP2-209ENST00000493166 TEX14Q8IWB6 1497 aa20.44■□□□□ 0.86
CLIP2-209ENST00000493166 KDM6BO15054 1643 aa20.43■□□□□ 0.86
CLIP2-209ENST00000493166 CDK11AQ9UQ88 783 aaPredicted RBP20.42■□□□□ 0.86
CLIP2-209ENST00000493166 MAGI3Q5TCQ9 1506 aa20.41■□□□□ 0.86
CLIP2-209ENST00000493166 KIF14Q15058 1648 aa20.41■□□□□ 0.86
CLIP2-209ENST00000493166 TTC37Q6PGP7 1564 aa20.4■□□□□ 0.86
CLIP2-209ENST00000493166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.4■□□□□ 0.86
CLIP2-209ENST00000493166 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
CLIP2-209ENST00000493166 MYO5CQ9NQX4 1742 aa20.37■□□□□ 0.85
CLIP2-209ENST00000493166 VPS8Q8N3P4 1428 aa20.36■□□□□ 0.85
CLIP2-209ENST00000493166 CFAP74Q9C0B2 1584 aa20.33■□□□□ 0.84
CLIP2-209ENST00000493166 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
CLIP2-209ENST00000493166 NEO1Q92859 1461 aa20.27■□□□□ 0.84
CLIP2-209ENST00000493166 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.83
CLIP2-209ENST00000493166 CDC42BPBQ9Y5S2 1711 aa20.26■□□□□ 0.83
CLIP2-209ENST00000493166 EHBP1L1Q8N3D4 1523 aa20.26■□□□□ 0.83
CLIP2-209ENST00000493166 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
CLIP2-209ENST00000493166 PREX2Q70Z35 1606 aa20.25■□□□□ 0.83
CLIP2-209ENST00000493166 FANCAO15360 1455 aa20.24■□□□□ 0.83
CLIP2-209ENST00000493166 COL17A1Q9UMD9 1497 aaPredicted RBP20.24■□□□□ 0.83
CLIP2-209ENST00000493166 ARAP3Q8WWN8 1544 aa20.24■□□□□ 0.83
CLIP2-209ENST00000493166 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
CLIP2-209ENST00000493166 PLCH2O75038 1416 aa20.23■□□□□ 0.83
CLIP2-209ENST00000493166 SUPT6HQ7KZ85 1726 aaKnown RBP20.21■□□□□ 0.83
CLIP2-209ENST00000493166 ARHGAP5Q13017 1502 aa20.21■□□□□ 0.83
CLIP2-209ENST00000493166 MAP3K1Q13233 1512 aa20.19■□□□□ 0.82
CLIP2-209ENST00000493166 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms