RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 CEP170Q5SW79 1584 aa15.27■□□□□ 0.04
CSTF1-206ENST00000493039 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
CSTF1-206ENST00000493039 KIAA0586Q9BVV6 1533 aa15.22■□□□□ 0.03
CSTF1-206ENST00000493039 TNIKQ9UKE5 1360 aa15.22■□□□□ 0.03
CSTF1-206ENST00000493039 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
CSTF1-206ENST00000493039 JPH4Q96JJ6 628 aa15.17■□□□□ 0.02
CSTF1-206ENST00000493039 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
CSTF1-206ENST00000493039 IQGAP2Q13576 1575 aa15.15■□□□□ 0.02
CSTF1-206ENST00000493039 CTTNBP2Q8WZ74 1663 aa15.14■□□□□ 0.01
CSTF1-206ENST00000493039 UGGT2Q9NYU1 1516 aa15.11■□□□□ 0.01
CSTF1-206ENST00000493039 CEP162Q5TB80 1403 aa15.1■□□□□ 0.01
CSTF1-206ENST00000493039 SHROOM2Q13796 1616 aa15.09■□□□□ 0.01
CSTF1-206ENST00000493039 DISP1Q96F81 1524 aa15.09■□□□□ 0.01
CSTF1-206ENST00000493039 PRG4Q92954 1404 aaPredicted RBP15.08■□□□□ 0.01
CSTF1-206ENST00000493039 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
CSTF1-206ENST00000493039 P3H3Q8IVL6 736 aa15.07■□□□□ 0
CSTF1-206ENST00000493039 CLIP1P30622 1438 aa15.07■□□□□ 0
CSTF1-206ENST00000493039 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
CSTF1-206ENST00000493039 MYT1Q01538 1121 aa15.07■□□□□ 0
CSTF1-206ENST00000493039 SAMD9Q5K651 1589 aa15.03■□□□□ -0
CSTF1-206ENST00000493039 ARAP1Q96P48 1450 aa15.02□□□□□ -0.01
CSTF1-206ENST00000493039 FHOD3Q2V2M9 1422 aa15.01□□□□□ -0.01
CSTF1-206ENST00000493039 KIAA0556O60303 1618 aa15.01□□□□□ -0.01
CSTF1-206ENST00000493039 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
CSTF1-206ENST00000493039 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
CSTF1-206ENST00000493039 EFCAB5A4FU69 1503 aa15□□□□□ -0.01
CSTF1-206ENST00000493039 ARHGEF11O15085 1522 aa14.98□□□□□ -0.01
CSTF1-206ENST00000493039 DNAJC5Q9H3Z4 198 aa14.97□□□□□ -0.01
CSTF1-206ENST00000493039 TTBK1Q5TCY1 1321 aaPredicted RBP14.96□□□□□ -0.01
CSTF1-206ENST00000493039 PTPRGP23470 1445 aa14.94□□□□□ -0.02
CSTF1-206ENST00000493039 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
CSTF1-206ENST00000493039 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
CSTF1-206ENST00000493039 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
CSTF1-206ENST00000493039 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
CSTF1-206ENST00000493039 FMN1Q68DA7 1419 aa14.88□□□□□ -0.03
CSTF1-206ENST00000493039 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
CSTF1-206ENST00000493039 CYB5RLQ6IPT4 315 aa14.88□□□□□ -0.03
CSTF1-206ENST00000493039 UACAQ9BZF9 1416 aa14.85□□□□□ -0.03
CSTF1-206ENST00000493039 ABCA8O94911 1581 aa14.84□□□□□ -0.03
CSTF1-206ENST00000493039 CASKIN1Q8WXD9 1431 aa14.83□□□□□ -0.03
CSTF1-206ENST00000493039 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
CSTF1-206ENST00000493039 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
CSTF1-206ENST00000493039 ARID3CA6NKF2 412 aa14.8□□□□□ -0.04
CSTF1-206ENST00000493039 ATP1B4Q9UN42 357 aaPredicted RBP14.8□□□□□ -0.04
CSTF1-206ENST00000493039 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
CSTF1-206ENST00000493039 RAPGEF6Q8TEU7 1601 aa14.79□□□□□ -0.04
CSTF1-206ENST00000493039 ABCC2Q92887 1545 aa14.79□□□□□ -0.04
CSTF1-206ENST00000493039 FYCO1Q9BQS8 1478 aa14.79□□□□□ -0.04
CSTF1-206ENST00000493039 ADCY10Q96PN6 1610 aa14.78□□□□□ -0.04
CSTF1-206ENST00000493039 ATP10BO94823 1461 aa14.77□□□□□ -0.05
CSTF1-206ENST00000493039 EPRSP07814 1512 aaKnown RBP14.76□□□□□ -0.05
CSTF1-206ENST00000493039 KDM5BQ9UGL1 1544 aa14.75□□□□□ -0.05
CSTF1-206ENST00000493039 CDK13Q14004 1512 aaKnown RBP14.74□□□□□ -0.05
CSTF1-206ENST00000493039 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
CSTF1-206ENST00000493039 HECW1Q76N89 1606 aa14.73□□□□□ -0.05
CSTF1-206ENST00000493039 KANK4Q5T7N3 995 aaPredicted RBP14.72□□□□□ -0.05
CSTF1-206ENST00000493039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
CSTF1-206ENST00000493039 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
CSTF1-206ENST00000493039 CCDC18Q5T9S5 1454 aa14.68□□□□□ -0.06
CSTF1-206ENST00000493039 MAGI3Q5TCQ9 1506 aa14.68□□□□□ -0.06
CSTF1-206ENST00000493039 MAP3K1Q13233 1512 aa14.67□□□□□ -0.06
CSTF1-206ENST00000493039 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
CSTF1-206ENST00000493039 ZCCHC11Q5TAX3 1644 aaKnown RBP14.67□□□□□ -0.06
CSTF1-206ENST00000493039 PPARGC1BQ86YN6 1023 aaKnown RBP14.67□□□□□ -0.06
CSTF1-206ENST00000493039 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
CSTF1-206ENST00000493039 APLP2Q06481 763 aa14.65□□□□□ -0.06
CSTF1-206ENST00000493039 PLEKHD1A6NEE1 506 aa14.64□□□□□ -0.07
CSTF1-206ENST00000493039 ASXL2Q76L83 1435 aa14.64□□□□□ -0.07
CSTF1-206ENST00000493039 LRRC9Q6ZRR7 1453 aa14.64□□□□□ -0.07
CSTF1-206ENST00000493039 CFAP43Q8NDM7 1665 aa14.63□□□□□ -0.07
CSTF1-206ENST00000493039 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
CSTF1-206ENST00000493039 TROQ12816 1431 aaPredicted RBP14.61□□□□□ -0.07
CSTF1-206ENST00000493039 MTUS2Q5JR59 1369 aa14.61□□□□□ -0.07
CSTF1-206ENST00000493039 MAPKBP1O60336 1514 aa14.6□□□□□ -0.07
CSTF1-206ENST00000493039 KCNH8Q96L42 1107 aa14.6□□□□□ -0.07
CSTF1-206ENST00000493039 WDR7Q9Y4E6 1490 aa14.59□□□□□ -0.07
CSTF1-206ENST00000493039 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
CSTF1-206ENST00000493039 KIF14Q15058 1648 aa14.54□□□□□ -0.08
CSTF1-206ENST00000493039 NCOA2Q15596 1464 aa14.53□□□□□ -0.08
CSTF1-206ENST00000493039 ABCC10Q5T3U5 1492 aa14.53□□□□□ -0.08
CSTF1-206ENST00000493039 PHLDB1Q86UU1 1377 aa14.52□□□□□ -0.08
CSTF1-206ENST00000493039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.09
CSTF1-206ENST00000493039 PRKCSHP14314 528 aaPredicted RBP14.51□□□□□ -0.09
CSTF1-206ENST00000493039 FAM69CQ0P6D2 419 aa14.5□□□□□ -0.09
CSTF1-206ENST00000493039 TTC37Q6PGP7 1564 aa14.48□□□□□ -0.09
CSTF1-206ENST00000493039 GPATCH8Q9UKJ3 1502 aaKnown RBP14.48□□□□□ -0.09
CSTF1-206ENST00000493039 DIP2BQ9P265 1576 aa14.48□□□□□ -0.09
CSTF1-206ENST00000493039 SUPT6HQ7KZ85 1726 aaKnown RBP14.47□□□□□ -0.09
CSTF1-206ENST00000493039 ABCA9Q8IUA7 1624 aa14.46□□□□□ -0.09
CSTF1-206ENST00000493039 GLI2P10070 1586 aa14.45□□□□□ -0.1
CSTF1-206ENST00000493039 CCNB3Q8WWL7 1395 aa14.45□□□□□ -0.1
CSTF1-206ENST00000493039 PLCH2O75038 1416 aa14.44□□□□□ -0.1
CSTF1-206ENST00000493039 MYOM3Q5VTT5 1437 aa14.44□□□□□ -0.1
CSTF1-206ENST00000493039 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
CSTF1-206ENST00000493039 ZNF644Q9H582 1327 aaPredicted RBP14.42□□□□□ -0.1
CSTF1-206ENST00000493039 CFDP1Q9UEE9 299 aaPredicted RBP14.42□□□□□ -0.1
CSTF1-206ENST00000493039 KIF13AQ9H1H9 1805 aa14.42□□□□□ -0.1
CSTF1-206ENST00000493039 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
CSTF1-206ENST00000493039 CDC42BPAQ5VT25 1732 aa14.4□□□□□ -0.1
CSTF1-206ENST00000493039 FGD6Q6ZV73 1430 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms