RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 TIMELESSQ9UNS1 1208 aa28.41■■■□□ 2.14
CHKB-CPT1B-203ENST00000492556 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
CHKB-CPT1B-203ENST00000492556 ZNF777Q9ULD5 760 aaPredicted RBP28.4■■■□□ 2.14
CHKB-CPT1B-203ENST00000492556 RBM19Q9Y4C8 960 aaKnown RBP28.39■■■□□ 2.14
CHKB-CPT1B-203ENST00000492556 CANXP27824 592 aaKnown RBP28.39■■■□□ 2.14
CHKB-CPT1B-203ENST00000492556 PPP4R2Q9NY27 417 aa28.39■■■□□ 2.13
CHKB-CPT1B-203ENST00000492556 WIZO95785 1651 aa28.37■■■□□ 2.13
CHKB-CPT1B-203ENST00000492556 BCL11AQ9H165 835 aa28.35■■■□□ 2.13
CHKB-CPT1B-203ENST00000492556 SALL2Q9Y467 1007 aaPredicted RBP28.31■■■□□ 2.12
CHKB-CPT1B-203ENST00000492556 RRP7BPQ9NSQ0 103 aa28.3■■■□□ 2.12
CHKB-CPT1B-203ENST00000492556 KANK4Q5T7N3 995 aaPredicted RBP28.29■■■□□ 2.12
CHKB-CPT1B-203ENST00000492556 SETD5Q9C0A6 1442 aa28.26■■■□□ 2.11
CHKB-CPT1B-203ENST00000492556 EIF5BO60841 1220 aaKnown RBP28.26■■■□□ 2.11
CHKB-CPT1B-203ENST00000492556 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
CHKB-CPT1B-203ENST00000492556 FBLN2P98095 1184 aa28.18■■■□□ 2.1
CHKB-CPT1B-203ENST00000492556 NOP58Q9Y2X3 529 aaKnown RBP28.16■■■□□ 2.1
CHKB-CPT1B-203ENST00000492556 RAB3GAP2Q9H2M9 1393 aa28.16■■■□□ 2.1
CHKB-CPT1B-203ENST00000492556 DHX57Q6P158 1386 aaKnown RBP28.16■■■□□ 2.1
CHKB-CPT1B-203ENST00000492556 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
CHKB-CPT1B-203ENST00000492556 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.12■■■□□ 2.09
CHKB-CPT1B-203ENST00000492556 B4GALNT3Q6L9W6 998 aa28.1■■■□□ 2.09
CHKB-CPT1B-203ENST00000492556 ERICH6BQ5W0A0 696 aa28.09■■■□□ 2.09
CHKB-CPT1B-203ENST00000492556 DDRGK1Q96HY6 314 aa28.08■■■□□ 2.09
CHKB-CPT1B-203ENST00000492556 UPF2Q9HAU5 1272 aaKnown RBP28.07■■■□□ 2.08
CHKB-CPT1B-203ENST00000492556 RUSC2Q8N2Y8 1516 aa28.06■■■□□ 2.08
CHKB-CPT1B-203ENST00000492556 KDM2AQ9Y2K7 1162 aa28.05■■■□□ 2.08
CHKB-CPT1B-203ENST00000492556 RAPGEF2Q9Y4G8 1499 aa27.99■■■□□ 2.07
CHKB-CPT1B-203ENST00000492556 PPP1R15AO75807 674 aaPredicted RBP27.99■■■□□ 2.07
CHKB-CPT1B-203ENST00000492556 WDR43Q15061 677 aaKnown RBP eCLIP27.99■■■□□ 2.07
CHKB-CPT1B-203ENST00000492556 PPM1GO15355 546 aaPredicted RBP27.98■■■□□ 2.07
CHKB-CPT1B-203ENST00000492556 DEKP35659 375 aaKnown RBP27.97■■■□□ 2.07
CHKB-CPT1B-203ENST00000492556 CARMIL1Q5VZK9 1371 aa27.97■■■□□ 2.07
CHKB-CPT1B-203ENST00000492556 KCNH8Q96L42 1107 aa27.96■■■□□ 2.07
CHKB-CPT1B-203ENST00000492556 ARHGAP35Q9NRY4 1499 aa27.94■■■□□ 2.06
CHKB-CPT1B-203ENST00000492556 TSPY4P0CV99 314 aa27.93■■■□□ 2.06
CHKB-CPT1B-203ENST00000492556 TSPY10P0CW01 314 aa27.93■■■□□ 2.06
CHKB-CPT1B-203ENST00000492556 HSPA5P11021 654 aaKnown RBP27.93■■■□□ 2.06
CHKB-CPT1B-203ENST00000492556 SENP3-EIF4A1A0A087X0R7 540 aa27.92■■■□□ 2.06
CHKB-CPT1B-203ENST00000492556 CUX2O14529 1486 aa27.91■■■□□ 2.06
CHKB-CPT1B-203ENST00000492556 NEFMP07197 916 aa27.85■■■□□ 2.05
CHKB-CPT1B-203ENST00000492556 LAS1LQ9Y4W2 734 aaKnown RBP27.84■■■□□ 2.05
CHKB-CPT1B-203ENST00000492556 GLIPR1L2Q4G1C9 344 aa27.83■■■□□ 2.05
CHKB-CPT1B-203ENST00000492556 CARD11Q9BXL7 1154 aa27.81■■■□□ 2.04
CHKB-CPT1B-203ENST00000492556 ANP32BQ92688 251 aaKnown RBP27.81■■■□□ 2.04
CHKB-CPT1B-203ENST00000492556 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
CHKB-CPT1B-203ENST00000492556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.79■■■□□ 2.047e-7■■■□□ 18.3
CHKB-CPT1B-203ENST00000492556 HSP90AA1P07900 732 aaKnown RBP27.78■■■□□ 2.04
CHKB-CPT1B-203ENST00000492556 SMARCA2P51531 1590 aa27.76■■■□□ 2.03
CHKB-CPT1B-203ENST00000492556 BECN1Q14457 450 aa27.75■■■□□ 2.03
CHKB-CPT1B-203ENST00000492556 ARXQ96QS3 562 aa27.7■■■□□ 2.03
CHKB-CPT1B-203ENST00000492556 RTN4Q9NQC3 1192 aaKnown RBP27.69■■■□□ 2.02
CHKB-CPT1B-203ENST00000492556 CFDP1Q9UEE9 299 aaPredicted RBP27.69■■■□□ 2.02
CHKB-CPT1B-203ENST00000492556 FANCIQ9NVI1 1328 aa27.64■■■□□ 2.02
CHKB-CPT1B-203ENST00000492556 FMN1Q68DA7 1419 aa27.61■■■□□ 2.01
CHKB-CPT1B-203ENST00000492556 RGL3Q3MIN7 710 aa27.6■■■□□ 2.01
CHKB-CPT1B-203ENST00000492556 KIF21BO75037 1637 aa27.6■■■□□ 2.01
CHKB-CPT1B-203ENST00000492556 IPO9Q96P70 1041 aaKnown RBP27.58■■■□□ 2.01
CHKB-CPT1B-203ENST00000492556 MPHOSPH9Q99550 1183 aa27.57■■■□□ 2
CHKB-CPT1B-203ENST00000492556 NUDCQ9Y266 331 aa27.57■■■□□ 2
CHKB-CPT1B-203ENST00000492556 KNSTRNQ9Y448 316 aa27.57■■■□□ 2
CHKB-CPT1B-203ENST00000492556 PLEKHD1A6NEE1 506 aa27.56■■■□□ 2
CHKB-CPT1B-203ENST00000492556 TCERG1O14776 1098 aaKnown RBP27.54■■■□□ 2
CHKB-CPT1B-203ENST00000492556 CHGAP10645 457 aaKnown RBP27.54■■■□□ 2
CHKB-CPT1B-203ENST00000492556 FOXD1Q16676 465 aa27.53■■■□□ 2
CHKB-CPT1B-203ENST00000492556 RGS3P49796 1198 aa27.52■■■□□ 2
CHKB-CPT1B-203ENST00000492556 CDCA8Q53HL2 280 aa27.51■■■□□ 2
CHKB-CPT1B-203ENST00000492556 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
CHKB-CPT1B-203ENST00000492556 L3MBTL2Q969R5 705 aa27.5■■□□□ 1.99
CHKB-CPT1B-203ENST00000492556 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
CHKB-CPT1B-203ENST00000492556 RCAN3Q9UKA8 241 aa27.47■■□□□ 1.99
CHKB-CPT1B-203ENST00000492556 CC2D1BQ5T0F9 858 aaKnown RBP27.46■■□□□ 1.99
CHKB-CPT1B-203ENST00000492556 FHOD3Q2V2M9 1422 aa27.46■■□□□ 1.99
CHKB-CPT1B-203ENST00000492556 DCAF11Q8TEB1 546 aa27.43■■□□□ 1.98
CHKB-CPT1B-203ENST00000492556 ZBED9Q6R2W3 1325 aa27.43■■□□□ 1.98
CHKB-CPT1B-203ENST00000492556 PRKRIP1Q9H875 184 aaPredicted RBP27.42■■□□□ 1.98
CHKB-CPT1B-203ENST00000492556 RALBP1Q15311 655 aa27.41■■□□□ 1.98
CHKB-CPT1B-203ENST00000492556 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
CHKB-CPT1B-203ENST00000492556 TRIM44Q96DX7 344 aaPredicted RBP27.4■■□□□ 1.98
CHKB-CPT1B-203ENST00000492556 RRBP1Q9P2E9 1410 aaKnown RBP27.39■■□□□ 1.98
CHKB-CPT1B-203ENST00000492556 KTN1Q86UP2 1357 aaKnown RBP27.37■■□□□ 1.97
CHKB-CPT1B-203ENST00000492556 CCDC18Q5T9S5 1454 aa27.36■■□□□ 1.97
CHKB-CPT1B-203ENST00000492556 PKD2Q13563 968 aa27.36■■□□□ 1.97
CHKB-CPT1B-203ENST00000492556 TMF1P82094 1093 aa27.34■■□□□ 1.97
CHKB-CPT1B-203ENST00000492556 GOLGA6L22H0YM25 854 aa27.28■■□□□ 1.96
CHKB-CPT1B-203ENST00000492556 CFAP53Q96M91 514 aa27.27■■□□□ 1.96
CHKB-CPT1B-203ENST00000492556 SLC24A1O60721 1099 aa27.27■■□□□ 1.96
CHKB-CPT1B-203ENST00000492556 ROCK2O75116 1388 aaKnown RBP27.27■■□□□ 1.96
CHKB-CPT1B-203ENST00000492556 PDE3BQ13370 1112 aa27.27■■□□□ 1.96
CHKB-CPT1B-203ENST00000492556 USP35Q9P2H5 1018 aa27.26■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 MYH16Q9H6N6 1097 aa27.26■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 PHLDB1Q86UU1 1377 aa27.25■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 FRAT1Q92837 279 aaPredicted RBP27.25■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 ERICH3Q5RHP9 1530 aa27.25■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 FTSJ3Q8IY81 847 aaKnown RBP27.24■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 ARAP1Q96P48 1450 aa27.23■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 NAP1L5Q96NT1 182 aaPredicted RBP27.23■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 L1TD1Q5T7N2 865 aaKnown RBP27.23■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 NEUROD2Q15784 382 aa27.22■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
CHKB-CPT1B-203ENST00000492556 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms