RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 RUSC2Q8N2Y8 1516 aa27.14■■□□□ 1.94
PKP4-214ENST00000492496 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
PKP4-214ENST00000492496 KIAA0586Q9BVV6 1533 aa27.06■■□□□ 1.92
PKP4-214ENST00000492496 JPH4Q96JJ6 628 aa27.04■■□□□ 1.92
PKP4-214ENST00000492496 PRG4Q92954 1404 aaPredicted RBP27■■□□□ 1.91
PKP4-214ENST00000492496 RAPGEF2Q9Y4G8 1499 aa26.99■■□□□ 1.91
PKP4-214ENST00000492496 IQGAP2Q13576 1575 aa26.89■■□□□ 1.9
PKP4-214ENST00000492496 PRXQ9BXM0 1461 aa26.86■■□□□ 1.89
PKP4-214ENST00000492496 EEA1Q15075 1411 aa26.82■■□□□ 1.88
PKP4-214ENST00000492496 CTTNBP2Q8WZ74 1663 aa26.81■■□□□ 1.88
PKP4-214ENST00000492496 CARMIL2Q6F5E8 1435 aa26.77■■□□□ 1.88
PKP4-214ENST00000492496 CSRNP3Q8WYN3 585 aa26.77■■□□□ 1.88
PKP4-214ENST00000492496 UGGT2Q9NYU1 1516 aa26.75■■□□□ 1.87
PKP4-214ENST00000492496 TRHP20396 242 aaPredicted RBP26.71■■□□□ 1.87
PKP4-214ENST00000492496 DISP1Q96F81 1524 aa26.7■■□□□ 1.86
PKP4-214ENST00000492496 TNIKQ9UKE5 1360 aa26.69■■□□□ 1.86
PKP4-214ENST00000492496 PTPRGP23470 1445 aa26.66■■□□□ 1.86
PKP4-214ENST00000492496 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
PKP4-214ENST00000492496 KIAA0556O60303 1618 aa26.64■■□□□ 1.85
PKP4-214ENST00000492496 GOLGA3Q08378 1498 aa26.59■■□□□ 1.85
PKP4-214ENST00000492496 NPM1P06748 294 aaKnown RBP eCLIP26.57■■□□□ 1.84
PKP4-214ENST00000492496 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
PKP4-214ENST00000492496 KIF21BO75037 1637 aa26.57■■□□□ 1.84
PKP4-214ENST00000492496 MAPKBP1O60336 1514 aa26.53■■□□□ 1.84
PKP4-214ENST00000492496 TTBK1Q5TCY1 1321 aaPredicted RBP26.52■■□□□ 1.84
PKP4-214ENST00000492496 UHRF1BP1LA0JNW5 1464 aa26.51■■□□□ 1.83
PKP4-214ENST00000492496 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
PKP4-214ENST00000492496 KIF13AQ9H1H9 1805 aa26.49■■□□□ 1.83
PKP4-214ENST00000492496 ABCC2Q92887 1545 aa26.47■■□□□ 1.83
PKP4-214ENST00000492496 SAMD9Q5K651 1589 aa26.41■■□□□ 1.82
PKP4-214ENST00000492496 ABCC10Q5T3U5 1492 aa26.41■■□□□ 1.82
PKP4-214ENST00000492496 KDM5BQ9UGL1 1544 aa26.38■■□□□ 1.81
PKP4-214ENST00000492496 DIP2BQ9P265 1576 aa26.37■■□□□ 1.81
PKP4-214ENST00000492496 ABCA8O94911 1581 aa26.37■■□□□ 1.81
PKP4-214ENST00000492496 PLB1Q6P1J6 1458 aa26.35■■□□□ 1.81
PKP4-214ENST00000492496 ZCCHC11Q5TAX3 1644 aaKnown RBP26.34■■□□□ 1.81
PKP4-214ENST00000492496 FAM69CQ0P6D2 419 aa26.31■■□□□ 1.8
PKP4-214ENST00000492496 ASXL2Q76L83 1435 aa26.31■■□□□ 1.8
PKP4-214ENST00000492496 P3H3Q8IVL6 736 aa26.29■■□□□ 1.8
PKP4-214ENST00000492496 EFCAB5A4FU69 1503 aa26.28■■□□□ 1.8
PKP4-214ENST00000492496 UBTFP17480 764 aaKnown RBP26.26■■□□□ 1.79
PKP4-214ENST00000492496 GLI2P10070 1586 aa26.22■■□□□ 1.79
PKP4-214ENST00000492496 RANGAP1P46060 587 aaPredicted RBP26.22■■□□□ 1.79
PKP4-214ENST00000492496 EHMT2Q96KQ7 1210 aa26.2■■□□□ 1.78
PKP4-214ENST00000492496 RAPGEF6Q8TEU7 1601 aa26.2■■□□□ 1.78
PKP4-214ENST00000492496 FHOD3Q2V2M9 1422 aa26.19■■□□□ 1.78
PKP4-214ENST00000492496 TSPOAP1O95153 1857 aa26.18■■□□□ 1.78
PKP4-214ENST00000492496 WDR7Q9Y4E6 1490 aa26.17■■□□□ 1.78
PKP4-214ENST00000492496 EPRSP07814 1512 aaKnown RBP26.16■■□□□ 1.78
PKP4-214ENST00000492496 ATP10BO94823 1461 aa26.11■■□□□ 1.77
PKP4-214ENST00000492496 MAP3K4Q9Y6R4 1608 aa26.1■■□□□ 1.77
PKP4-214ENST00000492496 ARHGAP35Q9NRY4 1499 aa26.08■■□□□ 1.77
PKP4-214ENST00000492496 PPRC1Q5VV67 1664 aaKnown RBP26.07■■□□□ 1.76
PKP4-214ENST00000492496 NUP153P49790 1475 aaKnown RBP26.06■■□□□ 1.76
PKP4-214ENST00000492496 CFAP43Q8NDM7 1665 aa26.03■■□□□ 1.76
PKP4-214ENST00000492496 ARID3CA6NKF2 412 aa26.01■■□□□ 1.75
PKP4-214ENST00000492496 FMN1Q68DA7 1419 aa26.01■■□□□ 1.75
PKP4-214ENST00000492496 KDM6BO15054 1643 aa25.99■■□□□ 1.75
PKP4-214ENST00000492496 TEX14Q8IWB6 1497 aa25.98■■□□□ 1.75
PKP4-214ENST00000492496 KCNH8Q96L42 1107 aa25.97■■□□□ 1.75
PKP4-214ENST00000492496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.94■■□□□ 1.74
PKP4-214ENST00000492496 HNRNPUL2Q1KMD3 747 aaKnown RBP25.94■■□□□ 1.74
PKP4-214ENST00000492496 HECW1Q76N89 1606 aa25.93■■□□□ 1.74
PKP4-214ENST00000492496 CD109Q6YHK3 1445 aa25.92■■□□□ 1.74
PKP4-214ENST00000492496 MAGI3Q5TCQ9 1506 aa25.92■■□□□ 1.74
PKP4-214ENST00000492496 ABCA9Q8IUA7 1624 aa25.91■■□□□ 1.74
PKP4-214ENST00000492496 PLEKHD1A6NEE1 506 aa25.87■■□□□ 1.73
PKP4-214ENST00000492496 CDK13Q14004 1512 aaKnown RBP25.86■■□□□ 1.73
PKP4-214ENST00000492496 CLIP1P30622 1438 aa25.86■■□□□ 1.73
PKP4-214ENST00000492496 ATP1B4Q9UN42 357 aaPredicted RBP25.8■■□□□ 1.72
PKP4-214ENST00000492496 LRRIQ1Q96JM4 1722 aa25.8■■□□□ 1.72
PKP4-214ENST00000492496 PCF11O94913 1555 aaKnown RBP25.78■■□□□ 1.72
PKP4-214ENST00000492496 CASKIN1Q8WXD9 1431 aa25.78■■□□□ 1.72
PKP4-214ENST00000492496 COL17A1Q9UMD9 1497 aaPredicted RBP25.78■■□□□ 1.72
PKP4-214ENST00000492496 CDK11AQ9UQ88 783 aaPredicted RBP25.75■■□□□ 1.71
PKP4-214ENST00000492496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.73■■□□□ 1.71
PKP4-214ENST00000492496 FYCO1Q9BQS8 1478 aa25.72■■□□□ 1.71
PKP4-214ENST00000492496 PHLDB1Q86UU1 1377 aa25.72■■□□□ 1.71
PKP4-214ENST00000492496 CCDC18Q5T9S5 1454 aa25.72■■□□□ 1.71
PKP4-214ENST00000492496 CEP162Q5TB80 1403 aa25.71■■□□□ 1.71
PKP4-214ENST00000492496 ARAP3Q8WWN8 1544 aa25.7■■□□□ 1.7
PKP4-214ENST00000492496 NEO1Q92859 1461 aa25.7■■□□□ 1.7
PKP4-214ENST00000492496 TTC37Q6PGP7 1564 aa25.69■■□□□ 1.7
PKP4-214ENST00000492496 CFAP74Q9C0B2 1584 aa25.66■■□□□ 1.7
PKP4-214ENST00000492496 TROQ12816 1431 aaPredicted RBP25.66■■□□□ 1.7
PKP4-214ENST00000492496 KIF14Q15058 1648 aa25.65■■□□□ 1.7
PKP4-214ENST00000492496 LOC105371045A0A1W2PR82 267 aa25.63■■□□□ 1.69
PKP4-214ENST00000492496 MYO5CQ9NQX4 1742 aa25.61■■□□□ 1.69
PKP4-214ENST00000492496 FANCAO15360 1455 aa25.6■■□□□ 1.69
PKP4-214ENST00000492496 PLCH2O75038 1416 aa25.58■■□□□ 1.69
PKP4-214ENST00000492496 AKNAQ7Z591 1439 aa25.55■■□□□ 1.68
PKP4-214ENST00000492496 FRMPD1Q5SYB0 1578 aa25.52■■□□□ 1.68
PKP4-214ENST00000492496 RICTORQ6R327 1708 aa25.51■■□□□ 1.67
PKP4-214ENST00000492496 DENND4BO75064 1496 aaPredicted RBP25.49■■□□□ 1.67
PKP4-214ENST00000492496 RAPGEF3O95398 923 aa25.48■■□□□ 1.67
PKP4-214ENST00000492496 CDC42BPBQ9Y5S2 1711 aa25.47■■□□□ 1.67
PKP4-214ENST00000492496 EFCAB2Q5VUJ9 269 aa25.47■■□□□ 1.67
PKP4-214ENST00000492496 PREX2Q70Z35 1606 aa25.46■■□□□ 1.67
PKP4-214ENST00000492496 ADGRL1O94910 1474 aa25.45■■□□□ 1.66
PKP4-214ENST00000492496 ARHGAP5Q13017 1502 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms