RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 RUSC2Q8N2Y8 1516 aa23.26■■□□□ 1.31
PTPN7-215ENST00000492451 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
PTPN7-215ENST00000492451 JPH4Q96JJ6 628 aa23.24■■□□□ 1.31
PTPN7-215ENST00000492451 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
PTPN7-215ENST00000492451 RAPGEF2Q9Y4G8 1499 aa23.15■■□□□ 1.3
PTPN7-215ENST00000492451 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.3
PTPN7-215ENST00000492451 EEA1Q15075 1411 aa23.13■■□□□ 1.29
PTPN7-215ENST00000492451 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
PTPN7-215ENST00000492451 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
PTPN7-215ENST00000492451 IQGAP2Q13576 1575 aa23■■□□□ 1.27
PTPN7-215ENST00000492451 ADCY10Q96PN6 1610 aa22.96■■□□□ 1.27
PTPN7-215ENST00000492451 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
PTPN7-215ENST00000492451 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
PTPN7-215ENST00000492451 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
PTPN7-215ENST00000492451 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
PTPN7-215ENST00000492451 PTPRGP23470 1445 aa22.89■■□□□ 1.25
PTPN7-215ENST00000492451 DISP1Q96F81 1524 aa22.88■■□□□ 1.25
PTPN7-215ENST00000492451 UGGT2Q9NYU1 1516 aa22.87■■□□□ 1.25
PTPN7-215ENST00000492451 KIF13AQ9H1H9 1805 aa22.86■■□□□ 1.25
PTPN7-215ENST00000492451 TNIKQ9UKE5 1360 aa22.86■■□□□ 1.25
PTPN7-215ENST00000492451 KIF21BO75037 1637 aa22.86■■□□□ 1.25
PTPN7-215ENST00000492451 MAPKBP1O60336 1514 aa22.83■■□□□ 1.25
PTPN7-215ENST00000492451 NPM1P06748 294 aaKnown RBP eCLIP22.82■■□□□ 1.24
PTPN7-215ENST00000492451 ABCC10Q5T3U5 1492 aa22.81■■□□□ 1.24
PTPN7-215ENST00000492451 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
PTPN7-215ENST00000492451 FAM69CQ0P6D2 419 aa22.78■■□□□ 1.24
PTPN7-215ENST00000492451 DIP2BQ9P265 1576 aa22.76■■□□□ 1.23
PTPN7-215ENST00000492451 KIAA0556O60303 1618 aa22.76■■□□□ 1.23
PTPN7-215ENST00000492451 ABCC2Q92887 1545 aa22.73■■□□□ 1.23
PTPN7-215ENST00000492451 UACAQ9BZF9 1416 aa22.73■■□□□ 1.23
PTPN7-215ENST00000492451 UHRF1BP1LA0JNW5 1464 aa22.72■■□□□ 1.23
PTPN7-215ENST00000492451 UBTFP17480 764 aaKnown RBP22.67■■□□□ 1.22
PTPN7-215ENST00000492451 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
PTPN7-215ENST00000492451 KDM5BQ9UGL1 1544 aa22.63■■□□□ 1.21
PTPN7-215ENST00000492451 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
PTPN7-215ENST00000492451 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
PTPN7-215ENST00000492451 EHMT2Q96KQ7 1210 aa22.62■■□□□ 1.21
PTPN7-215ENST00000492451 ZCCHC11Q5TAX3 1644 aaKnown RBP22.57■■□□□ 1.2
PTPN7-215ENST00000492451 RANGAP1P46060 587 aaPredicted RBP22.57■■□□□ 1.2
PTPN7-215ENST00000492451 P3H3Q8IVL6 736 aa22.57■■□□□ 1.2
PTPN7-215ENST00000492451 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
PTPN7-215ENST00000492451 TSPOAP1O95153 1857 aa22.56■■□□□ 1.2
PTPN7-215ENST00000492451 ABCA8O94911 1581 aa22.55■■□□□ 1.2
PTPN7-215ENST00000492451 GLI2P10070 1586 aa22.53■■□□□ 1.2
PTPN7-215ENST00000492451 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.2
PTPN7-215ENST00000492451 PPRC1Q5VV67 1664 aaKnown RBP22.5■■□□□ 1.19
PTPN7-215ENST00000492451 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
PTPN7-215ENST00000492451 KDM6BO15054 1643 aa22.46■■□□□ 1.19
PTPN7-215ENST00000492451 WDR7Q9Y4E6 1490 aa22.45■■□□□ 1.18
PTPN7-215ENST00000492451 ARID3CA6NKF2 412 aa22.43■■□□□ 1.18
PTPN7-215ENST00000492451 MAP3K4Q9Y6R4 1608 aa22.42■■□□□ 1.18
PTPN7-215ENST00000492451 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
PTPN7-215ENST00000492451 ARHGAP35Q9NRY4 1499 aa22.41■■□□□ 1.18
PTPN7-215ENST00000492451 COL17A1Q9UMD9 1497 aaPredicted RBP22.4■■□□□ 1.18
PTPN7-215ENST00000492451 ATP10BO94823 1461 aa22.38■■□□□ 1.17
PTPN7-215ENST00000492451 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
PTPN7-215ENST00000492451 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
PTPN7-215ENST00000492451 FMN1Q68DA7 1419 aa22.36■■□□□ 1.17
PTPN7-215ENST00000492451 NUP153P49790 1475 aaKnown RBP22.31■■□□□ 1.16
PTPN7-215ENST00000492451 CLIP1P30622 1438 aa22.31■■□□□ 1.16
PTPN7-215ENST00000492451 CD109Q6YHK3 1445 aa22.29■■□□□ 1.16
PTPN7-215ENST00000492451 TEX14Q8IWB6 1497 aa22.28■■□□□ 1.16
PTPN7-215ENST00000492451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
PTPN7-215ENST00000492451 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
PTPN7-215ENST00000492451 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
PTPN7-215ENST00000492451 KDM4FA0A1W2PPD8 638 aa22.25■■□□□ 1.15
PTPN7-215ENST00000492451 CFAP43Q8NDM7 1665 aa22.25■■□□□ 1.15
PTPN7-215ENST00000492451 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
PTPN7-215ENST00000492451 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
PTPN7-215ENST00000492451 ATP1B4Q9UN42 357 aaPredicted RBP22.21■■□□□ 1.15
PTPN7-215ENST00000492451 CEP162Q5TB80 1403 aa22.21■■□□□ 1.15
PTPN7-215ENST00000492451 PLEKHD1A6NEE1 506 aa22.18■■□□□ 1.14
PTPN7-215ENST00000492451 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
PTPN7-215ENST00000492451 ABCA9Q8IUA7 1624 aa22.17■■□□□ 1.14
PTPN7-215ENST00000492451 CDK13Q14004 1512 aaKnown RBP22.15■■□□□ 1.14
PTPN7-215ENST00000492451 PCF11O94913 1555 aaKnown RBP22.13■■□□□ 1.13
PTPN7-215ENST00000492451 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
PTPN7-215ENST00000492451 FYCO1Q9BQS8 1478 aa22.13■■□□□ 1.13
PTPN7-215ENST00000492451 CCDC18Q5T9S5 1454 aa22.1■■□□□ 1.13
PTPN7-215ENST00000492451 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.13
PTPN7-215ENST00000492451 LRRIQ1Q96JM4 1722 aa22.07■■□□□ 1.12
PTPN7-215ENST00000492451 ADGRL1O94910 1474 aa22.07■■□□□ 1.12
PTPN7-215ENST00000492451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.03■■□□□ 1.12
PTPN7-215ENST00000492451 RAPGEF3O95398 923 aa22.01■■□□□ 1.11
PTPN7-215ENST00000492451 NEO1Q92859 1461 aa22.01■■□□□ 1.11
PTPN7-215ENST00000492451 TTC37Q6PGP7 1564 aa22■■□□□ 1.11
PTPN7-215ENST00000492451 TROQ12816 1431 aaPredicted RBP22■■□□□ 1.11
PTPN7-215ENST00000492451 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
PTPN7-215ENST00000492451 FRMPD1Q5SYB0 1578 aa21.97■■□□□ 1.11
PTPN7-215ENST00000492451 KIF14Q15058 1648 aa21.96■■□□□ 1.11
PTPN7-215ENST00000492451 VPS8Q8N3P4 1428 aa21.95■■□□□ 1.1
PTPN7-215ENST00000492451 FANCAO15360 1455 aa21.92■■□□□ 1.1
PTPN7-215ENST00000492451 AKNAQ7Z591 1439 aa21.92■■□□□ 1.1
PTPN7-215ENST00000492451 CFAP74Q9C0B2 1584 aa21.9■■□□□ 1.1
PTPN7-215ENST00000492451 MYO5CQ9NQX4 1742 aa21.89■■□□□ 1.09
PTPN7-215ENST00000492451 PLCH2O75038 1416 aa21.89■■□□□ 1.09
PTPN7-215ENST00000492451 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
PTPN7-215ENST00000492451 MTUS2Q5JR59 1369 aa21.86■■□□□ 1.09
PTPN7-215ENST00000492451 RICTORQ6R327 1708 aa21.85■■□□□ 1.09
PTPN7-215ENST00000492451 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms