RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PRG4Q92954 1404 aaPredicted RBP14.66□□□□□ -0.06
SMARCB1-207ENST00000491967 CUL7Q14999 1698 aa14.65□□□□□ -0.06
SMARCB1-207ENST00000491967 KIAA0586Q9BVV6 1533 aa14.63□□□□□ -0.07
SMARCB1-207ENST00000491967 CARMIL1Q5VZK9 1371 aa14.59□□□□□ -0.07
SMARCB1-207ENST00000491967 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
SMARCB1-207ENST00000491967 KIF13AQ9H1H9 1805 aa14.51□□□□□ -0.09
SMARCB1-207ENST00000491967 ADCY10Q96PN6 1610 aa14.5□□□□□ -0.09
SMARCB1-207ENST00000491967 MAPKBP1O60336 1514 aa14.49□□□□□ -0.09
SMARCB1-207ENST00000491967 IQGAP2Q13576 1575 aa14.46□□□□□ -0.09
SMARCB1-207ENST00000491967 ABCC10Q5T3U5 1492 aa14.45□□□□□ -0.1
SMARCB1-207ENST00000491967 RAPGEF2Q9Y4G8 1499 aa14.45□□□□□ -0.1
SMARCB1-207ENST00000491967 PTPRGP23470 1445 aa14.44□□□□□ -0.1
SMARCB1-207ENST00000491967 TNIKQ9UKE5 1360 aa14.43□□□□□ -0.1
SMARCB1-207ENST00000491967 CARMIL2Q6F5E8 1435 aa14.42□□□□□ -0.1
SMARCB1-207ENST00000491967 DISP1Q96F81 1524 aa14.42□□□□□ -0.1
SMARCB1-207ENST00000491967 UGGT2Q9NYU1 1516 aa14.42□□□□□ -0.1
SMARCB1-207ENST00000491967 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMARCB1-207ENST00000491967 DIP2BQ9P265 1576 aa14.4□□□□□ -0.1
SMARCB1-207ENST00000491967 UHRF1BP1LA0JNW5 1464 aa14.4□□□□□ -0.1
SMARCB1-207ENST00000491967 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
SMARCB1-207ENST00000491967 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
SMARCB1-207ENST00000491967 ABCC2Q92887 1545 aa14.37□□□□□ -0.11
SMARCB1-207ENST00000491967 UACAQ9BZF9 1416 aa14.34□□□□□ -0.11
SMARCB1-207ENST00000491967 KIAA0556O60303 1618 aa14.33□□□□□ -0.12
SMARCB1-207ENST00000491967 KDM5BQ9UGL1 1544 aa14.32□□□□□ -0.12
SMARCB1-207ENST00000491967 CTTNBP2Q8WZ74 1663 aa14.32□□□□□ -0.12
SMARCB1-207ENST00000491967 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
SMARCB1-207ENST00000491967 GLI2P10070 1586 aa14.3□□□□□ -0.12
SMARCB1-207ENST00000491967 ASXL2Q76L83 1435 aa14.3□□□□□ -0.12
SMARCB1-207ENST00000491967 GOLGA3Q08378 1498 aa14.27□□□□□ -0.12
SMARCB1-207ENST00000491967 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
SMARCB1-207ENST00000491967 TSPOAP1O95153 1857 aa14.25□□□□□ -0.13
SMARCB1-207ENST00000491967 PPRC1Q5VV67 1664 aaKnown RBP14.24□□□□□ -0.13
SMARCB1-207ENST00000491967 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
SMARCB1-207ENST00000491967 ZCCHC11Q5TAX3 1644 aaKnown RBP14.23□□□□□ -0.13
SMARCB1-207ENST00000491967 ABCA8O94911 1581 aa14.23□□□□□ -0.13
SMARCB1-207ENST00000491967 EPRSP07814 1512 aaKnown RBP14.22□□□□□ -0.13
SMARCB1-207ENST00000491967 KDM6BO15054 1643 aa14.21□□□□□ -0.13
SMARCB1-207ENST00000491967 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.13
SMARCB1-207ENST00000491967 EEA1Q15075 1411 aa14.21□□□□□ -0.13
SMARCB1-207ENST00000491967 WDR7Q9Y4E6 1490 aa14.17□□□□□ -0.14
SMARCB1-207ENST00000491967 SAMD9Q5K651 1589 aa14.16□□□□□ -0.14
SMARCB1-207ENST00000491967 COL17A1Q9UMD9 1497 aaPredicted RBP14.14□□□□□ -0.15
SMARCB1-207ENST00000491967 TEX14Q8IWB6 1497 aa14.12□□□□□ -0.15
SMARCB1-207ENST00000491967 ATP10BO94823 1461 aa14.11□□□□□ -0.15
SMARCB1-207ENST00000491967 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
SMARCB1-207ENST00000491967 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
SMARCB1-207ENST00000491967 KIF21BO75037 1637 aa14.09□□□□□ -0.15
SMARCB1-207ENST00000491967 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
SMARCB1-207ENST00000491967 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
SMARCB1-207ENST00000491967 CD109Q6YHK3 1445 aa14.07□□□□□ -0.16
SMARCB1-207ENST00000491967 FAM9AQ8IZU1 332 aaPredicted RBP14.06□□□□□ -0.16
SMARCB1-207ENST00000491967 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
SMARCB1-207ENST00000491967 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
SMARCB1-207ENST00000491967 KCNH8Q96L42 1107 aa14.04□□□□□ -0.16
SMARCB1-207ENST00000491967 NUP153P49790 1475 aaKnown RBP14.03□□□□□ -0.16
SMARCB1-207ENST00000491967 ABCA9Q8IUA7 1624 aa14.02□□□□□ -0.16
SMARCB1-207ENST00000491967 ILDR1Q86SU0 546 aaPredicted RBP14.02□□□□□ -0.17
SMARCB1-207ENST00000491967 EFCAB5A4FU69 1503 aa14.01□□□□□ -0.17
SMARCB1-207ENST00000491967 ARAP3Q8WWN8 1544 aa14.01□□□□□ -0.17
SMARCB1-207ENST00000491967 FHOD3Q2V2M9 1422 aa13.99□□□□□ -0.17
SMARCB1-207ENST00000491967 PHLDB1Q86UU1 1377 aa13.99□□□□□ -0.17
SMARCB1-207ENST00000491967 ARID3CA6NKF2 412 aa13.96□□□□□ -0.17
SMARCB1-207ENST00000491967 ADGRL1O94910 1474 aa13.95□□□□□ -0.18
SMARCB1-207ENST00000491967 NEO1Q92859 1461 aa13.93□□□□□ -0.18
SMARCB1-207ENST00000491967 PLEKHD1A6NEE1 506 aa13.91□□□□□ -0.18
SMARCB1-207ENST00000491967 RANGAP1P46060 587 aaPredicted RBP13.91□□□□□ -0.18
SMARCB1-207ENST00000491967 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
SMARCB1-207ENST00000491967 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
SMARCB1-207ENST00000491967 FMN1Q68DA7 1419 aa13.89□□□□□ -0.19
SMARCB1-207ENST00000491967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
SMARCB1-207ENST00000491967 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
SMARCB1-207ENST00000491967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCB1-207ENST00000491967 FRMPD1Q5SYB0 1578 aa13.86□□□□□ -0.19
SMARCB1-207ENST00000491967 RAPGEF3O95398 923 aa13.85□□□□□ -0.19
SMARCB1-207ENST00000491967 CDK13Q14004 1512 aaKnown RBP13.85□□□□□ -0.19
SMARCB1-207ENST00000491967 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.19
SMARCB1-207ENST00000491967 AKNAQ7Z591 1439 aa13.82□□□□□ -0.2
SMARCB1-207ENST00000491967 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
SMARCB1-207ENST00000491967 HECW1Q76N89 1606 aa13.82□□□□□ -0.2
SMARCB1-207ENST00000491967 PLCH2O75038 1416 aa13.81□□□□□ -0.2
SMARCB1-207ENST00000491967 FANCAO15360 1455 aa13.81□□□□□ -0.2
SMARCB1-207ENST00000491967 CFAP74Q9C0B2 1584 aa13.8□□□□□ -0.2
SMARCB1-207ENST00000491967 ADAMTSL3P82987 1691 aa13.8□□□□□ -0.2
SMARCB1-207ENST00000491967 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
SMARCB1-207ENST00000491967 LRRIQ1Q96JM4 1722 aa13.79□□□□□ -0.2
SMARCB1-207ENST00000491967 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
SMARCB1-207ENST00000491967 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
SMARCB1-207ENST00000491967 ZMYM4Q5VZL5 1548 aa13.78□□□□□ -0.2
SMARCB1-207ENST00000491967 TROQ12816 1431 aaPredicted RBP13.76□□□□□ -0.21
SMARCB1-207ENST00000491967 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
SMARCB1-207ENST00000491967 ARHGEF40Q8TER5 1519 aa13.75□□□□□ -0.21
SMARCB1-207ENST00000491967 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
SMARCB1-207ENST00000491967 BCORL1Q5H9F3 1711 aa13.75□□□□□ -0.21
SMARCB1-207ENST00000491967 KIF14Q15058 1648 aa13.74□□□□□ -0.21
SMARCB1-207ENST00000491967 HECW2Q9P2P5 1572 aa13.74□□□□□ -0.21
SMARCB1-207ENST00000491967 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
SMARCB1-207ENST00000491967 POGZQ7Z3K3 1410 aa13.73□□□□□ -0.21
SMARCB1-207ENST00000491967 EFCAB2Q5VUJ9 269 aa13.72□□□□□ -0.21
SMARCB1-207ENST00000491967 PTPRMP28827 1452 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms