RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 ERCC6L2Q5T890 1561 aa25.6■■□□□ 1.69
SS18L1-204ENST00000491916 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
SS18L1-204ENST00000491916 KIAA0586Q9BVV6 1533 aa25.58■■□□□ 1.69
SS18L1-204ENST00000491916 JPH4Q96JJ6 628 aa25.56■■□□□ 1.68
SS18L1-204ENST00000491916 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
SS18L1-204ENST00000491916 CSRNP3Q8WYN3 585 aa25.53■■□□□ 1.68
SS18L1-204ENST00000491916 EEA1Q15075 1411 aa25.52■■□□□ 1.68
SS18L1-204ENST00000491916 PRG4Q92954 1404 aaPredicted RBP25.49■■□□□ 1.67
SS18L1-204ENST00000491916 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
SS18L1-204ENST00000491916 IQGAP2Q13576 1575 aa25.41■■□□□ 1.66
SS18L1-204ENST00000491916 CTTNBP2Q8WZ74 1663 aa25.32■■□□□ 1.64
SS18L1-204ENST00000491916 UGGT2Q9NYU1 1516 aa25.32■■□□□ 1.64
SS18L1-204ENST00000491916 DISP1Q96F81 1524 aa25.31■■□□□ 1.64
SS18L1-204ENST00000491916 KIF21BO75037 1637 aa25.29■■□□□ 1.64
SS18L1-204ENST00000491916 CARMIL2Q6F5E8 1435 aa25.22■■□□□ 1.63
SS18L1-204ENST00000491916 TNIKQ9UKE5 1360 aa25.2■■□□□ 1.63
SS18L1-204ENST00000491916 KIAA0556O60303 1618 aa25.19■■□□□ 1.62
SS18L1-204ENST00000491916 PTPRGP23470 1445 aa25.17■■□□□ 1.62
SS18L1-204ENST00000491916 ADCY10Q96PN6 1610 aa25.13■■□□□ 1.61
SS18L1-204ENST00000491916 GOLGA3Q08378 1498 aa25.11■■□□□ 1.61
SS18L1-204ENST00000491916 SAMD9Q5K651 1589 aa25.07■■□□□ 1.6
SS18L1-204ENST00000491916 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
SS18L1-204ENST00000491916 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
SS18L1-204ENST00000491916 UHRF1BP1LA0JNW5 1464 aa25.02■■□□□ 1.6
SS18L1-204ENST00000491916 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
SS18L1-204ENST00000491916 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
SS18L1-204ENST00000491916 P3H3Q8IVL6 736 aa25■■□□□ 1.59
SS18L1-204ENST00000491916 ABCC2Q92887 1545 aa24.97■■□□□ 1.59
SS18L1-204ENST00000491916 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
SS18L1-204ENST00000491916 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
SS18L1-204ENST00000491916 ABCA8O94911 1581 aa24.95■■□□□ 1.58
SS18L1-204ENST00000491916 MAPKBP1O60336 1514 aa24.93■■□□□ 1.58
SS18L1-204ENST00000491916 TRHP20396 242 aaPredicted RBP24.91■■□□□ 1.58
SS18L1-204ENST00000491916 EFCAB5A4FU69 1503 aa24.91■■□□□ 1.58
SS18L1-204ENST00000491916 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
SS18L1-204ENST00000491916 FHOD3Q2V2M9 1422 aa24.9■■□□□ 1.58
SS18L1-204ENST00000491916 NPM1P06748 294 aaKnown RBP eCLIP24.9■■□□□ 1.58
SS18L1-204ENST00000491916 ARHGAP35Q9NRY4 1499 aa24.87■■□□□ 1.57
SS18L1-204ENST00000491916 ZCCHC11Q5TAX3 1644 aaKnown RBP24.83■■□□□ 1.56
SS18L1-204ENST00000491916 KIF13AQ9H1H9 1805 aa24.82■■□□□ 1.56
SS18L1-204ENST00000491916 ABCC10Q5T3U5 1492 aa24.82■■□□□ 1.56
SS18L1-204ENST00000491916 ASXL2Q76L83 1435 aa24.8■■□□□ 1.56
SS18L1-204ENST00000491916 RAPGEF6Q8TEU7 1601 aa24.78■■□□□ 1.56
SS18L1-204ENST00000491916 DIP2BQ9P265 1576 aa24.77■■□□□ 1.56
SS18L1-204ENST00000491916 ATP10BO94823 1461 aa24.76■■□□□ 1.55
SS18L1-204ENST00000491916 LOC105371045A0A1W2PR82 267 aa24.74■■□□□ 1.55
SS18L1-204ENST00000491916 NUP153P49790 1475 aaKnown RBP24.74■■□□□ 1.55
SS18L1-204ENST00000491916 FAM69CQ0P6D2 419 aa24.72■■□□□ 1.55
SS18L1-204ENST00000491916 ARID3CA6NKF2 412 aa24.68■■□□□ 1.54
SS18L1-204ENST00000491916 EPRSP07814 1512 aaKnown RBP24.67■■□□□ 1.54
SS18L1-204ENST00000491916 CLIP1P30622 1438 aa24.67■■□□□ 1.54
SS18L1-204ENST00000491916 WDR7Q9Y4E6 1490 aa24.66■■□□□ 1.54
SS18L1-204ENST00000491916 FMN1Q68DA7 1419 aa24.66■■□□□ 1.54
SS18L1-204ENST00000491916 GLI2P10070 1586 aa24.66■■□□□ 1.54
SS18L1-204ENST00000491916 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
SS18L1-204ENST00000491916 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
SS18L1-204ENST00000491916 PPRC1Q5VV67 1664 aaKnown RBP24.55■■□□□ 1.52
SS18L1-204ENST00000491916 MAP3K4Q9Y6R4 1608 aa24.54■■□□□ 1.52
SS18L1-204ENST00000491916 LRRIQ1Q96JM4 1722 aa24.53■■□□□ 1.52
SS18L1-204ENST00000491916 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
SS18L1-204ENST00000491916 TSPOAP1O95153 1857 aa24.53■■□□□ 1.52
SS18L1-204ENST00000491916 HECW1Q76N89 1606 aa24.53■■□□□ 1.52
SS18L1-204ENST00000491916 CASKIN1Q8WXD9 1431 aa24.52■■□□□ 1.52
SS18L1-204ENST00000491916 PCF11O94913 1555 aaKnown RBP24.52■■□□□ 1.52
SS18L1-204ENST00000491916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.49■■□□□ 1.51
SS18L1-204ENST00000491916 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
SS18L1-204ENST00000491916 ATP1B4Q9UN42 357 aaPredicted RBP24.46■■□□□ 1.51
SS18L1-204ENST00000491916 PLEKHD1A6NEE1 506 aa24.45■■□□□ 1.5
SS18L1-204ENST00000491916 FYCO1Q9BQS8 1478 aa24.45■■□□□ 1.5
SS18L1-204ENST00000491916 CFAP43Q8NDM7 1665 aa24.44■■□□□ 1.5
SS18L1-204ENST00000491916 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
SS18L1-204ENST00000491916 CD109Q6YHK3 1445 aa24.43■■□□□ 1.5
SS18L1-204ENST00000491916 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
SS18L1-204ENST00000491916 CCDC18Q5T9S5 1454 aa24.37■■□□□ 1.49
SS18L1-204ENST00000491916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.36■■□□□ 1.49
SS18L1-204ENST00000491916 COL17A1Q9UMD9 1497 aaPredicted RBP24.35■■□□□ 1.49
SS18L1-204ENST00000491916 TEX14Q8IWB6 1497 aa24.34■■□□□ 1.49
SS18L1-204ENST00000491916 TROQ12816 1431 aaPredicted RBP24.34■■□□□ 1.49
SS18L1-204ENST00000491916 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
SS18L1-204ENST00000491916 TTC37Q6PGP7 1564 aa24.32■■□□□ 1.48
SS18L1-204ENST00000491916 KDM6BO15054 1643 aa24.3■■□□□ 1.48
SS18L1-204ENST00000491916 KIF14Q15058 1648 aa24.3■■□□□ 1.48
SS18L1-204ENST00000491916 VPS8Q8N3P4 1428 aa24.29■■□□□ 1.48
SS18L1-204ENST00000491916 PLCH2O75038 1416 aa24.21■■□□□ 1.47
SS18L1-204ENST00000491916 ARAP3Q8WWN8 1544 aa24.2■■□□□ 1.47
SS18L1-204ENST00000491916 NEO1Q92859 1461 aa24.2■■□□□ 1.47
SS18L1-204ENST00000491916 PHLDB1Q86UU1 1377 aa24.17■■□□□ 1.46
SS18L1-204ENST00000491916 FANCAO15360 1455 aa24.15■■□□□ 1.46
SS18L1-204ENST00000491916 MYO5CQ9NQX4 1742 aa24.14■■□□□ 1.45
SS18L1-204ENST00000491916 TIAM1Q13009 1591 aa24.13■■□□□ 1.45
SS18L1-204ENST00000491916 AKNAQ7Z591 1439 aa24.13■■□□□ 1.45
SS18L1-204ENST00000491916 CDC42BPBQ9Y5S2 1711 aa24.11■■□□□ 1.45
SS18L1-204ENST00000491916 MTUS2Q5JR59 1369 aa24.11■■□□□ 1.45
SS18L1-204ENST00000491916 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
SS18L1-204ENST00000491916 FRMPD1Q5SYB0 1578 aa24.09■■□□□ 1.45
SS18L1-204ENST00000491916 EHBP1L1Q8N3D4 1523 aa24.09■■□□□ 1.45
SS18L1-204ENST00000491916 CFAP74Q9C0B2 1584 aa24.08■■□□□ 1.45
SS18L1-204ENST00000491916 CDC42BPAQ5VT25 1732 aa24.08■■□□□ 1.45
SS18L1-204ENST00000491916 RAPGEF3O95398 923 aa24.08■■□□□ 1.45
SS18L1-204ENST00000491916 PREX2Q70Z35 1606 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms