RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PRG4Q92954 1404 aaPredicted RBP15.2■□□□□ 0.02
NUP50-217ENST00000491860 MAPKBP1O60336 1514 aa15.19■□□□□ 0.02
NUP50-217ENST00000491860 ABCC10Q5T3U5 1492 aa15.19■□□□□ 0.02
NUP50-217ENST00000491860 JPH4Q96JJ6 628 aa15.17■□□□□ 0.02
NUP50-217ENST00000491860 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
NUP50-217ENST00000491860 IGF1RP08069 1367 aa15.15■□□□□ 0.02
NUP50-217ENST00000491860 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
NUP50-217ENST00000491860 KIAA0586Q9BVV6 1533 aa15.12■□□□□ 0.01
NUP50-217ENST00000491860 ADCY10Q96PN6 1610 aa15.11■□□□□ 0.01
NUP50-217ENST00000491860 FAM69CQ0P6D2 419 aa15.11■□□□□ 0.01
NUP50-217ENST00000491860 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
NUP50-217ENST00000491860 KDM6BO15054 1643 aa15.08■□□□□ 0
NUP50-217ENST00000491860 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
NUP50-217ENST00000491860 KDM4FA0A1W2PPD8 638 aa15.03■□□□□ -0
NUP50-217ENST00000491860 CARMIL2Q6F5E8 1435 aa15.02■□□□□ -0
NUP50-217ENST00000491860 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
NUP50-217ENST00000491860 TSPOAP1O95153 1857 aa14.98□□□□□ -0.01
NUP50-217ENST00000491860 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
NUP50-217ENST00000491860 PTPRGP23470 1445 aa14.96□□□□□ -0.01
NUP50-217ENST00000491860 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.02
NUP50-217ENST00000491860 GLI2P10070 1586 aa14.94□□□□□ -0.02
NUP50-217ENST00000491860 ABCC2Q92887 1545 aa14.93□□□□□ -0.02
NUP50-217ENST00000491860 PPRC1Q5VV67 1664 aaKnown RBP14.92□□□□□ -0.02
NUP50-217ENST00000491860 PLB1Q6P1J6 1458 aa14.91□□□□□ -0.02
NUP50-217ENST00000491860 UHRF1BP1LA0JNW5 1464 aa14.89□□□□□ -0.03
NUP50-217ENST00000491860 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
NUP50-217ENST00000491860 ASXL2Q76L83 1435 aa14.88□□□□□ -0.03
NUP50-217ENST00000491860 ILDR1Q86SU0 546 aaPredicted RBP14.87□□□□□ -0.03
NUP50-217ENST00000491860 ADGRL1O94910 1474 aa14.86□□□□□ -0.03
NUP50-217ENST00000491860 DISP1Q96F81 1524 aa14.86□□□□□ -0.03
NUP50-217ENST00000491860 UACAQ9BZF9 1416 aa14.85□□□□□ -0.03
NUP50-217ENST00000491860 CTTNBP2Q8WZ74 1663 aa14.85□□□□□ -0.03
NUP50-217ENST00000491860 GOLGA3Q08378 1498 aa14.84□□□□□ -0.03
NUP50-217ENST00000491860 KIAA0556O60303 1618 aa14.83□□□□□ -0.04
NUP50-217ENST00000491860 MAP3K4Q9Y6R4 1608 aa14.83□□□□□ -0.04
NUP50-217ENST00000491860 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
NUP50-217ENST00000491860 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
NUP50-217ENST00000491860 TTBK1Q5TCY1 1321 aaPredicted RBP14.81□□□□□ -0.04
NUP50-217ENST00000491860 PRXQ9BXM0 1461 aa14.81□□□□□ -0.04
NUP50-217ENST00000491860 EPRSP07814 1512 aaKnown RBP14.81□□□□□ -0.04
NUP50-217ENST00000491860 TEX14Q8IWB6 1497 aa14.8□□□□□ -0.04
NUP50-217ENST00000491860 COL17A1Q9UMD9 1497 aaPredicted RBP14.8□□□□□ -0.04
NUP50-217ENST00000491860 HECW2Q9P2P5 1572 aa14.77□□□□□ -0.05
NUP50-217ENST00000491860 EEA1Q15075 1411 aa14.76□□□□□ -0.05
NUP50-217ENST00000491860 ZCCHC11Q5TAX3 1644 aaKnown RBP14.76□□□□□ -0.05
NUP50-217ENST00000491860 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
NUP50-217ENST00000491860 WDR7Q9Y4E6 1490 aa14.7□□□□□ -0.06
NUP50-217ENST00000491860 ABCA8O94911 1581 aa14.68□□□□□ -0.06
NUP50-217ENST00000491860 MAGI3Q5TCQ9 1506 aa14.68□□□□□ -0.06
NUP50-217ENST00000491860 CFAP43Q8NDM7 1665 aa14.68□□□□□ -0.06
NUP50-217ENST00000491860 SAMD9Q5K651 1589 aa14.63□□□□□ -0.07
NUP50-217ENST00000491860 CD109Q6YHK3 1445 aa14.62□□□□□ -0.07
NUP50-217ENST00000491860 ARAP3Q8WWN8 1544 aa14.58□□□□□ -0.08
NUP50-217ENST00000491860 KIF21BO75037 1637 aa14.58□□□□□ -0.08
NUP50-217ENST00000491860 RAPGEF6Q8TEU7 1601 aa14.56□□□□□ -0.08
NUP50-217ENST00000491860 EFCAB5A4FU69 1503 aa14.56□□□□□ -0.08
NUP50-217ENST00000491860 P3H3Q8IVL6 736 aa14.55□□□□□ -0.08
NUP50-217ENST00000491860 KCNH8Q96L42 1107 aa14.55□□□□□ -0.08
NUP50-217ENST00000491860 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
NUP50-217ENST00000491860 ATP10BO94823 1461 aa14.54□□□□□ -0.08
NUP50-217ENST00000491860 PHLDB1Q86UU1 1377 aa14.53□□□□□ -0.08
NUP50-217ENST00000491860 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.08
NUP50-217ENST00000491860 ABCA9Q8IUA7 1624 aa14.51□□□□□ -0.09
NUP50-217ENST00000491860 PTPRMP28827 1452 aa14.49□□□□□ -0.09
NUP50-217ENST00000491860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
NUP50-217ENST00000491860 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
NUP50-217ENST00000491860 FHOD3Q2V2M9 1422 aa14.47□□□□□ -0.09
NUP50-217ENST00000491860 NUP153P49790 1475 aaKnown RBP14.46□□□□□ -0.09
NUP50-217ENST00000491860 NEO1Q92859 1461 aa14.46□□□□□ -0.09
NUP50-217ENST00000491860 PLEKHD1A6NEE1 506 aa14.45□□□□□ -0.1
NUP50-217ENST00000491860 ARID3CA6NKF2 412 aa14.45□□□□□ -0.1
NUP50-217ENST00000491860 BCORL1Q5H9F3 1711 aa14.45□□□□□ -0.1
NUP50-217ENST00000491860 CHIC1Q5VXU3 224 aa14.45□□□□□ -0.1
NUP50-217ENST00000491860 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
NUP50-217ENST00000491860 UBTFP17480 764 aaKnown RBP14.43□□□□□ -0.1
NUP50-217ENST00000491860 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
NUP50-217ENST00000491860 FMN1Q68DA7 1419 aa14.42□□□□□ -0.1
NUP50-217ENST00000491860 FRMPD1Q5SYB0 1578 aa14.42□□□□□ -0.1
NUP50-217ENST00000491860 CFAP74Q9C0B2 1584 aa14.4□□□□□ -0.1
NUP50-217ENST00000491860 LMTK3Q96Q04 1460 aa14.4□□□□□ -0.1
NUP50-217ENST00000491860 MADDQ8WXG6 1647 aa14.4□□□□□ -0.1
NUP50-217ENST00000491860 HECW1Q76N89 1606 aa14.37□□□□□ -0.11
NUP50-217ENST00000491860 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
NUP50-217ENST00000491860 RAPGEF3O95398 923 aa14.37□□□□□ -0.11
NUP50-217ENST00000491860 CDK11AQ9UQ88 783 aaPredicted RBP14.36□□□□□ -0.11
NUP50-217ENST00000491860 RICTORQ6R327 1708 aa14.35□□□□□ -0.11
NUP50-217ENST00000491860 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.11
NUP50-217ENST00000491860 FANCAO15360 1455 aa14.33□□□□□ -0.12
NUP50-217ENST00000491860 ARHGAP35Q9NRY4 1499 aa14.33□□□□□ -0.12
NUP50-217ENST00000491860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.33□□□□□ -0.12
NUP50-217ENST00000491860 DENND4BO75064 1496 aaPredicted RBP14.32□□□□□ -0.12
NUP50-217ENST00000491860 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
NUP50-217ENST00000491860 ZMYM4Q5VZL5 1548 aa14.31□□□□□ -0.12
NUP50-217ENST00000491860 ARID4BQ4LE39 1312 aaPredicted RBP14.31□□□□□ -0.12
NUP50-217ENST00000491860 CDK13Q14004 1512 aaKnown RBP14.3□□□□□ -0.12
NUP50-217ENST00000491860 ATP1B4Q9UN42 357 aaPredicted RBP14.29□□□□□ -0.12
NUP50-217ENST00000491860 TTC37Q6PGP7 1564 aa14.29□□□□□ -0.12
NUP50-217ENST00000491860 CLIP1P30622 1438 aa14.28□□□□□ -0.12
NUP50-217ENST00000491860 POGZQ7Z3K3 1410 aa14.28□□□□□ -0.12
NUP50-217ENST00000491860 MAGI2Q86UL8 1455 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms