RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CYB5RLQ6IPT4 315 aa15.68■□□□□ 0.1
BRCA1-219ENST00000491747 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
BRCA1-219ENST00000491747 KIAA0586Q9BVV6 1533 aa15.65■□□□□ 0.1
BRCA1-219ENST00000491747 JPH4Q96JJ6 628 aa15.64■□□□□ 0.09
BRCA1-219ENST00000491747 PRXQ9BXM0 1461 aa15.63■□□□□ 0.09
BRCA1-219ENST00000491747 PRG4Q92954 1404 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-219ENST00000491747 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
BRCA1-219ENST00000491747 FAM9AQ8IZU1 332 aaPredicted RBP15.58■□□□□ 0.09
BRCA1-219ENST00000491747 IQGAP2Q13576 1575 aa15.58■□□□□ 0.09
BRCA1-219ENST00000491747 EEA1Q15075 1411 aa15.58■□□□□ 0.08
BRCA1-219ENST00000491747 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
BRCA1-219ENST00000491747 DISP1Q96F81 1524 aa15.49■□□□□ 0.07
BRCA1-219ENST00000491747 UGGT2Q9NYU1 1516 aa15.49■□□□□ 0.07
BRCA1-219ENST00000491747 KIF21BO75037 1637 aa15.48■□□□□ 0.07
BRCA1-219ENST00000491747 CARMIL2Q6F5E8 1435 aa15.45■□□□□ 0.06
BRCA1-219ENST00000491747 KIAA0556O60303 1618 aa15.45■□□□□ 0.06
BRCA1-219ENST00000491747 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-219ENST00000491747 ADCY10Q96PN6 1610 aa15.42■□□□□ 0.06
BRCA1-219ENST00000491747 TNIKQ9UKE5 1360 aa15.42■□□□□ 0.06
BRCA1-219ENST00000491747 PTPRGP23470 1445 aa15.41■□□□□ 0.06
BRCA1-219ENST00000491747 EHMT2Q96KQ7 1210 aa15.41■□□□□ 0.06
BRCA1-219ENST00000491747 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
BRCA1-219ENST00000491747 SAMD9Q5K651 1589 aa15.35■□□□□ 0.05
BRCA1-219ENST00000491747 TRHP20396 242 aaPredicted RBP15.34■□□□□ 0.05
BRCA1-219ENST00000491747 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-219ENST00000491747 P3H3Q8IVL6 736 aa15.33■□□□□ 0.04
BRCA1-219ENST00000491747 UACAQ9BZF9 1416 aa15.32■□□□□ 0.04
BRCA1-219ENST00000491747 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
BRCA1-219ENST00000491747 UHRF1BP1LA0JNW5 1464 aa15.31■□□□□ 0.04
BRCA1-219ENST00000491747 ABCC2Q92887 1545 aa15.31■□□□□ 0.04
BRCA1-219ENST00000491747 PLB1Q6P1J6 1458 aa15.3■□□□□ 0.04
BRCA1-219ENST00000491747 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
BRCA1-219ENST00000491747 ABCA8O94911 1581 aa15.28■□□□□ 0.04
BRCA1-219ENST00000491747 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
BRCA1-219ENST00000491747 MAPKBP1O60336 1514 aa15.28■□□□□ 0.04
BRCA1-219ENST00000491747 ZCCHC11Q5TAX3 1644 aaKnown RBP15.26■□□□□ 0.03
BRCA1-219ENST00000491747 FHOD3Q2V2M9 1422 aa15.25■□□□□ 0.03
BRCA1-219ENST00000491747 KDM5BQ9UGL1 1544 aa15.25■□□□□ 0.03
BRCA1-219ENST00000491747 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
BRCA1-219ENST00000491747 DIP2BQ9P265 1576 aa15.21■□□□□ 0.03
BRCA1-219ENST00000491747 ABCC10Q5T3U5 1492 aa15.21■□□□□ 0.03
BRCA1-219ENST00000491747 ARHGAP35Q9NRY4 1499 aa15.21■□□□□ 0.02
BRCA1-219ENST00000491747 RAPGEF6Q8TEU7 1601 aa15.2■□□□□ 0.02
BRCA1-219ENST00000491747 ASXL2Q76L83 1435 aa15.2■□□□□ 0.02
BRCA1-219ENST00000491747 FAM69CQ0P6D2 419 aa15.17■□□□□ 0.02
BRCA1-219ENST00000491747 ARID3CA6NKF2 412 aa15.16■□□□□ 0.02
BRCA1-219ENST00000491747 ATP10BO94823 1461 aa15.15■□□□□ 0.02
BRCA1-219ENST00000491747 NUP153P49790 1475 aaKnown RBP15.14■□□□□ 0.01
BRCA1-219ENST00000491747 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
BRCA1-219ENST00000491747 LOC105371045A0A1W2PR82 267 aa15.12■□□□□ 0.01
BRCA1-219ENST00000491747 EPRSP07814 1512 aaKnown RBP15.12■□□□□ 0.01
BRCA1-219ENST00000491747 GLI2P10070 1586 aa15.11■□□□□ 0.01
BRCA1-219ENST00000491747 WDR7Q9Y4E6 1490 aa15.11■□□□□ 0.01
BRCA1-219ENST00000491747 PPRC1Q5VV67 1664 aaKnown RBP15.09■□□□□ 0.01
BRCA1-219ENST00000491747 CLIP1P30622 1438 aa15.08■□□□□ 0.01
BRCA1-219ENST00000491747 FMN1Q68DA7 1419 aa15.08■□□□□ 0.01
BRCA1-219ENST00000491747 LRRIQ1Q96JM4 1722 aa15.08■□□□□ 0
BRCA1-219ENST00000491747 MAP3K4Q9Y6R4 1608 aa15.08■□□□□ 0
BRCA1-219ENST00000491747 KCNH8Q96L42 1107 aa15.06■□□□□ 0
BRCA1-219ENST00000491747 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ 0
BRCA1-219ENST00000491747 HECW1Q76N89 1606 aa15.05■□□□□ -0
BRCA1-219ENST00000491747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
BRCA1-219ENST00000491747 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
BRCA1-219ENST00000491747 PCF11O94913 1555 aaKnown RBP15.03■□□□□ -0
BRCA1-219ENST00000491747 CEP162Q5TB80 1403 aa15.03■□□□□ -0
BRCA1-219ENST00000491747 ATP1B4Q9UN42 357 aaPredicted RBP15.02■□□□□ -0
BRCA1-219ENST00000491747 CFAP43Q8NDM7 1665 aa15.02□□□□□ -0.01
BRCA1-219ENST00000491747 CASKIN1Q8WXD9 1431 aa14.99□□□□□ -0.01
BRCA1-219ENST00000491747 ABCA9Q8IUA7 1624 aa14.99□□□□□ -0.01
BRCA1-219ENST00000491747 CD109Q6YHK3 1445 aa14.97□□□□□ -0.01
BRCA1-219ENST00000491747 PLEKHD1A6NEE1 506 aa14.97□□□□□ -0.01
BRCA1-219ENST00000491747 KDM6BO15054 1643 aa14.96□□□□□ -0.02
BRCA1-219ENST00000491747 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
BRCA1-219ENST00000491747 MAGI3Q5TCQ9 1506 aa14.95□□□□□ -0.02
BRCA1-219ENST00000491747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.93□□□□□ -0.02
BRCA1-219ENST00000491747 TEX14Q8IWB6 1497 aa14.93□□□□□ -0.02
BRCA1-219ENST00000491747 COL17A1Q9UMD9 1497 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-219ENST00000491747 TTC37Q6PGP7 1564 aa14.92□□□□□ -0.02
BRCA1-219ENST00000491747 KIF14Q15058 1648 aa14.91□□□□□ -0.02
BRCA1-219ENST00000491747 CCDC18Q5T9S5 1454 aa14.91□□□□□ -0.02
BRCA1-219ENST00000491747 TROQ12816 1431 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-219ENST00000491747 HRCP23327 699 aa14.88□□□□□ -0.03
BRCA1-219ENST00000491747 CDK11AQ9UQ88 783 aaPredicted RBP14.88□□□□□ -0.03
BRCA1-219ENST00000491747 MYO5CQ9NQX4 1742 aa14.84□□□□□ -0.03
BRCA1-219ENST00000491747 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
BRCA1-219ENST00000491747 ARAP3Q8WWN8 1544 aa14.82□□□□□ -0.04
BRCA1-219ENST00000491747 NEO1Q92859 1461 aa14.82□□□□□ -0.04
BRCA1-219ENST00000491747 PLCH2O75038 1416 aa14.81□□□□□ -0.04
BRCA1-219ENST00000491747 CDC42BPBQ9Y5S2 1711 aa14.81□□□□□ -0.04
BRCA1-219ENST00000491747 FANCAO15360 1455 aa14.8□□□□□ -0.04
BRCA1-219ENST00000491747 CDC42BPAQ5VT25 1732 aa14.79□□□□□ -0.04
BRCA1-219ENST00000491747 CFAP74Q9C0B2 1584 aa14.79□□□□□ -0.04
BRCA1-219ENST00000491747 AKNAQ7Z591 1439 aa14.78□□□□□ -0.04
BRCA1-219ENST00000491747 TIAM1Q13009 1591 aa14.78□□□□□ -0.04
BRCA1-219ENST00000491747 FRMPD1Q5SYB0 1578 aa14.78□□□□□ -0.04
BRCA1-219ENST00000491747 PHLDB1Q86UU1 1377 aa14.78□□□□□ -0.04
BRCA1-219ENST00000491747 PREX2Q70Z35 1606 aa14.77□□□□□ -0.04
BRCA1-219ENST00000491747 RAPGEF3O95398 923 aa14.76□□□□□ -0.05
BRCA1-219ENST00000491747 RICTORQ6R327 1708 aa14.76□□□□□ -0.05
BRCA1-219ENST00000491747 MTUS2Q5JR59 1369 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms