RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 KIAA0586Q9BVV6 1533 aa22.25■■□□□ 1.15
NUP188-208ENST00000491502 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
NUP188-208ENST00000491502 RUSC2Q8N2Y8 1516 aa22.22■■□□□ 1.15
NUP188-208ENST00000491502 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
NUP188-208ENST00000491502 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
NUP188-208ENST00000491502 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
NUP188-208ENST00000491502 IQGAP2Q13576 1575 aa22.05■■□□□ 1.12
NUP188-208ENST00000491502 CARMIL2Q6F5E8 1435 aa22.05■■□□□ 1.12
NUP188-208ENST00000491502 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
NUP188-208ENST00000491502 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
NUP188-208ENST00000491502 EEA1Q15075 1411 aa22.03■■□□□ 1.12
NUP188-208ENST00000491502 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
NUP188-208ENST00000491502 TNIKQ9UKE5 1360 aa21.97■■□□□ 1.11
NUP188-208ENST00000491502 PTPRGP23470 1445 aa21.97■■□□□ 1.11
NUP188-208ENST00000491502 UGGT2Q9NYU1 1516 aa21.95■■□□□ 1.1
NUP188-208ENST00000491502 CTTNBP2Q8WZ74 1663 aa21.91■■□□□ 1.1
NUP188-208ENST00000491502 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
NUP188-208ENST00000491502 TTBK1Q5TCY1 1321 aaPredicted RBP21.88■■□□□ 1.09
NUP188-208ENST00000491502 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
NUP188-208ENST00000491502 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
NUP188-208ENST00000491502 ADCY10Q96PN6 1610 aa21.85■■□□□ 1.09
NUP188-208ENST00000491502 KIAA0556O60303 1618 aa21.82■■□□□ 1.08
NUP188-208ENST00000491502 UACAQ9BZF9 1416 aa21.8■■□□□ 1.08
NUP188-208ENST00000491502 UHRF1BP1LA0JNW5 1464 aa21.79■■□□□ 1.08
NUP188-208ENST00000491502 MAPKBP1O60336 1514 aa21.79■■□□□ 1.08
NUP188-208ENST00000491502 ABCC2Q92887 1545 aa21.76■■□□□ 1.07
NUP188-208ENST00000491502 KIF21BO75037 1637 aa21.74■■□□□ 1.07
NUP188-208ENST00000491502 FAM69CQ0P6D2 419 aa21.73■■□□□ 1.07
NUP188-208ENST00000491502 ABCC10Q5T3U5 1492 aa21.72■■□□□ 1.07
NUP188-208ENST00000491502 KIF13AQ9H1H9 1805 aa21.68■■□□□ 1.06
NUP188-208ENST00000491502 KDM5BQ9UGL1 1544 aa21.67■■□□□ 1.06
NUP188-208ENST00000491502 PLB1Q6P1J6 1458 aa21.66■■□□□ 1.06
NUP188-208ENST00000491502 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
NUP188-208ENST00000491502 P3H3Q8IVL6 736 aa21.66■■□□□ 1.06
NUP188-208ENST00000491502 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.05
NUP188-208ENST00000491502 ASXL2Q76L83 1435 aa21.63■■□□□ 1.05
NUP188-208ENST00000491502 SAMD9Q5K651 1589 aa21.63■■□□□ 1.05
NUP188-208ENST00000491502 DIP2BQ9P265 1576 aa21.63■■□□□ 1.05
NUP188-208ENST00000491502 ABCA8O94911 1581 aa21.61■■□□□ 1.05
NUP188-208ENST00000491502 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
NUP188-208ENST00000491502 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.04
NUP188-208ENST00000491502 EHMT2Q96KQ7 1210 aa21.57■■□□□ 1.04
NUP188-208ENST00000491502 EFCAB5A4FU69 1503 aa21.54■■□□□ 1.04
NUP188-208ENST00000491502 GLI2P10070 1586 aa21.53■■□□□ 1.04
NUP188-208ENST00000491502 EPRSP07814 1512 aaKnown RBP21.5■■□□□ 1.03
NUP188-208ENST00000491502 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
NUP188-208ENST00000491502 WDR7Q9Y4E6 1490 aa21.49■■□□□ 1.03
NUP188-208ENST00000491502 RAPGEF6Q8TEU7 1601 aa21.47■■□□□ 1.03
NUP188-208ENST00000491502 ATP10BO94823 1461 aa21.46■■□□□ 1.03
NUP188-208ENST00000491502 TSPOAP1O95153 1857 aa21.45■■□□□ 1.02
NUP188-208ENST00000491502 KCNH8Q96L42 1107 aa21.44■■□□□ 1.02
NUP188-208ENST00000491502 ARID3CA6NKF2 412 aa21.43■■□□□ 1.02
NUP188-208ENST00000491502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
NUP188-208ENST00000491502 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
NUP188-208ENST00000491502 NUP153P49790 1475 aaKnown RBP21.39■■□□□ 1.01
NUP188-208ENST00000491502 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.01
NUP188-208ENST00000491502 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
NUP188-208ENST00000491502 MAP3K4Q9Y6R4 1608 aa21.38■■□□□ 1.01
NUP188-208ENST00000491502 TEX14Q8IWB6 1497 aa21.38■■□□□ 1.01
NUP188-208ENST00000491502 KDM6BO15054 1643 aa21.36■■□□□ 1.01
NUP188-208ENST00000491502 CD109Q6YHK3 1445 aa21.35■■□□□ 1.01
NUP188-208ENST00000491502 PPRC1Q5VV67 1664 aaKnown RBP21.34■■□□□ 1.01
NUP188-208ENST00000491502 PLEKHD1A6NEE1 506 aa21.34■■□□□ 1.01
NUP188-208ENST00000491502 CFAP43Q8NDM7 1665 aa21.33■■□□□ 1
NUP188-208ENST00000491502 MAGI3Q5TCQ9 1506 aa21.3■■□□□ 1
NUP188-208ENST00000491502 ATP1B4Q9UN42 357 aaPredicted RBP21.29■■□□□ 1
NUP188-208ENST00000491502 CEP162Q5TB80 1403 aa21.29■■□□□ 1
NUP188-208ENST00000491502 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
NUP188-208ENST00000491502 HECW1Q76N89 1606 aa21.24■□□□□ 0.99
NUP188-208ENST00000491502 ABCA9Q8IUA7 1624 aa21.24■□□□□ 0.99
NUP188-208ENST00000491502 CLIP1P30622 1438 aa21.23■□□□□ 0.99
NUP188-208ENST00000491502 PHLDB1Q86UU1 1377 aa21.22■□□□□ 0.99
NUP188-208ENST00000491502 COL17A1Q9UMD9 1497 aaPredicted RBP21.2■□□□□ 0.98
NUP188-208ENST00000491502 CDK13Q14004 1512 aaKnown RBP21.19■□□□□ 0.98
NUP188-208ENST00000491502 CASKIN1Q8WXD9 1431 aa21.17■□□□□ 0.98
NUP188-208ENST00000491502 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
NUP188-208ENST00000491502 ARAP3Q8WWN8 1544 aa21.13■□□□□ 0.97
NUP188-208ENST00000491502 NEO1Q92859 1461 aa21.13■□□□□ 0.97
NUP188-208ENST00000491502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.11■□□□□ 0.97
NUP188-208ENST00000491502 CCDC18Q5T9S5 1454 aa21.11■□□□□ 0.97
NUP188-208ENST00000491502 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
NUP188-208ENST00000491502 TROQ12816 1431 aaPredicted RBP21.09■□□□□ 0.97
NUP188-208ENST00000491502 PCF11O94913 1555 aaKnown RBP21.09■□□□□ 0.97
NUP188-208ENST00000491502 PLCH2O75038 1416 aa21.04■□□□□ 0.96
NUP188-208ENST00000491502 LRRIQ1Q96JM4 1722 aa21.04■□□□□ 0.96
NUP188-208ENST00000491502 TTC37Q6PGP7 1564 aa21.04■□□□□ 0.96
NUP188-208ENST00000491502 AKNAQ7Z591 1439 aa21.04■□□□□ 0.96
NUP188-208ENST00000491502 CFAP74Q9C0B2 1584 aa21.03■□□□□ 0.96
NUP188-208ENST00000491502 FANCAO15360 1455 aa21.03■□□□□ 0.96
NUP188-208ENST00000491502 KIF14Q15058 1648 aa21.02■□□□□ 0.96
NUP188-208ENST00000491502 RAPGEF3O95398 923 aa21.01■□□□□ 0.95
NUP188-208ENST00000491502 EFCAB2Q5VUJ9 269 aa21.01■□□□□ 0.95
NUP188-208ENST00000491502 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
NUP188-208ENST00000491502 DENND4BO75064 1496 aaPredicted RBP20.98■□□□□ 0.95
NUP188-208ENST00000491502 KDM4FA0A1W2PPD8 638 aa20.97■□□□□ 0.95
NUP188-208ENST00000491502 MYO5CQ9NQX4 1742 aa20.96■□□□□ 0.95
NUP188-208ENST00000491502 APLP2Q06481 763 aa20.96■□□□□ 0.95
NUP188-208ENST00000491502 ADGRL1O94910 1474 aa20.92■□□□□ 0.94
NUP188-208ENST00000491502 SCAPERQ9BY12 1400 aa20.91■□□□□ 0.94
NUP188-208ENST00000491502 ARHGAP5Q13017 1502 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms