RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RUSC2Q8N2Y8 1516 aa31.09■■■□□ 2.57
HMGN1-219ENST00000491183 PRG4Q92954 1404 aaPredicted RBP31.09■■■□□ 2.57
HMGN1-219ENST00000491183 CARMIL1Q5VZK9 1371 aa31.03■■■□□ 2.56
HMGN1-219ENST00000491183 KIAA0586Q9BVV6 1533 aa30.99■■■□□ 2.55
HMGN1-219ENST00000491183 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.51
HMGN1-219ENST00000491183 IQGAP2Q13576 1575 aa30.71■■■□□ 2.51
HMGN1-219ENST00000491183 ADCY10Q96PN6 1610 aa30.69■■■□□ 2.5
HMGN1-219ENST00000491183 PTPRGP23470 1445 aa30.65■■■□□ 2.5
HMGN1-219ENST00000491183 NPM1P06748 294 aaKnown RBP eCLIP30.65■■■□□ 2.5
HMGN1-219ENST00000491183 CARMIL2Q6F5E8 1435 aa30.64■■■□□ 2.5
HMGN1-219ENST00000491183 TNIKQ9UKE5 1360 aa30.62■■■□□ 2.49
HMGN1-219ENST00000491183 KIF13AQ9H1H9 1805 aa30.61■■■□□ 2.49
HMGN1-219ENST00000491183 TTBK1Q5TCY1 1321 aaPredicted RBP30.61■■■□□ 2.49
HMGN1-219ENST00000491183 DISP1Q96F81 1524 aa30.59■■■□□ 2.49
HMGN1-219ENST00000491183 MAPKBP1O60336 1514 aa30.57■■■□□ 2.48
HMGN1-219ENST00000491183 UGGT2Q9NYU1 1516 aa30.56■■■□□ 2.48
HMGN1-219ENST00000491183 PRXQ9BXM0 1461 aa30.54■■■□□ 2.48
HMGN1-219ENST00000491183 ABCC10Q5T3U5 1492 aa30.52■■■□□ 2.48
HMGN1-219ENST00000491183 FAM69CQ0P6D2 419 aa30.5■■■□□ 2.47
HMGN1-219ENST00000491183 CTTNBP2Q8WZ74 1663 aa30.48■■■□□ 2.47
HMGN1-219ENST00000491183 DIP2BQ9P265 1576 aa30.45■■■□□ 2.46
HMGN1-219ENST00000491183 KIAA0556O60303 1618 aa30.44■■■□□ 2.46
HMGN1-219ENST00000491183 ABCC2Q92887 1545 aa30.43■■■□□ 2.46
HMGN1-219ENST00000491183 UACAQ9BZF9 1416 aa30.42■■■□□ 2.46
HMGN1-219ENST00000491183 UHRF1BP1LA0JNW5 1464 aa30.42■■■□□ 2.46
HMGN1-219ENST00000491183 CSRNP3Q8WYN3 585 aa30.41■■■□□ 2.46
HMGN1-219ENST00000491183 GOLGA3Q08378 1498 aa30.31■■■□□ 2.44
HMGN1-219ENST00000491183 ASXL2Q76L83 1435 aa30.3■■■□□ 2.44
HMGN1-219ENST00000491183 KDM5BQ9UGL1 1544 aa30.29■■■□□ 2.44
HMGN1-219ENST00000491183 EEA1Q15075 1411 aa30.27■■■□□ 2.44
HMGN1-219ENST00000491183 PLB1Q6P1J6 1458 aa30.26■■■□□ 2.44
HMGN1-219ENST00000491183 TSPOAP1O95153 1857 aa30.24■■■□□ 2.43
HMGN1-219ENST00000491183 ZCCHC11Q5TAX3 1644 aaKnown RBP30.22■■■□□ 2.43
HMGN1-219ENST00000491183 FAM9AQ8IZU1 332 aaPredicted RBP30.21■■■□□ 2.43
HMGN1-219ENST00000491183 GLI2P10070 1586 aa30.18■■■□□ 2.42
HMGN1-219ENST00000491183 ABCA8O94911 1581 aa30.17■■■□□ 2.42
HMGN1-219ENST00000491183 P3H3Q8IVL6 736 aa30.16■■■□□ 2.42
HMGN1-219ENST00000491183 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
HMGN1-219ENST00000491183 EPRSP07814 1512 aaKnown RBP30.12■■■□□ 2.41
HMGN1-219ENST00000491183 PPRC1Q5VV67 1664 aaKnown RBP30.09■■■□□ 2.41
HMGN1-219ENST00000491183 KDM6BO15054 1643 aa30.08■■■□□ 2.41
HMGN1-219ENST00000491183 SAMD9Q5K651 1589 aa30.07■■■□□ 2.4
HMGN1-219ENST00000491183 WDR7Q9Y4E6 1490 aa30.04■■■□□ 2.4
HMGN1-219ENST00000491183 KIF21BO75037 1637 aa30.03■■■□□ 2.4
HMGN1-219ENST00000491183 MAP3K4Q9Y6R4 1608 aa30.03■■■□□ 2.4
HMGN1-219ENST00000491183 RANGAP1P46060 587 aaPredicted RBP30■■■□□ 2.39
HMGN1-219ENST00000491183 AEBP2Q6ZN18 517 aaPredicted RBP29.99■■■□□ 2.39
HMGN1-219ENST00000491183 ATP10BO94823 1461 aa29.95■■■□□ 2.39
HMGN1-219ENST00000491183 ARID3CA6NKF2 412 aa29.95■■■□□ 2.39
HMGN1-219ENST00000491183 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
HMGN1-219ENST00000491183 RAPGEF6Q8TEU7 1601 aa29.89■■■□□ 2.38
HMGN1-219ENST00000491183 FHOD3Q2V2M9 1422 aa29.89■■■□□ 2.38
HMGN1-219ENST00000491183 COL17A1Q9UMD9 1497 aaPredicted RBP29.89■■■□□ 2.38
HMGN1-219ENST00000491183 TEX14Q8IWB6 1497 aa29.88■■■□□ 2.37
HMGN1-219ENST00000491183 EHMT2Q96KQ7 1210 aa29.87■■■□□ 2.37
HMGN1-219ENST00000491183 CD109Q6YHK3 1445 aa29.85■■■□□ 2.37
HMGN1-219ENST00000491183 CFAP43Q8NDM7 1665 aa29.83■■■□□ 2.37
HMGN1-219ENST00000491183 UBTFP17480 764 aaKnown RBP29.82■■■□□ 2.36
HMGN1-219ENST00000491183 EFCAB5A4FU69 1503 aa29.81■■■□□ 2.36
HMGN1-219ENST00000491183 MAGI3Q5TCQ9 1506 aa29.81■■■□□ 2.36
HMGN1-219ENST00000491183 NUP153P49790 1475 aaKnown RBP29.8■■■□□ 2.36
HMGN1-219ENST00000491183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.75■■■□□ 2.35
HMGN1-219ENST00000491183 HNRNPUL2Q1KMD3 747 aaKnown RBP29.75■■■□□ 2.35
HMGN1-219ENST00000491183 KDM4FA0A1W2PPD8 638 aa29.72■■■□□ 2.35
HMGN1-219ENST00000491183 ABCA9Q8IUA7 1624 aa29.69■■■□□ 2.34
HMGN1-219ENST00000491183 ARHGAP35Q9NRY4 1499 aa29.65■■■□□ 2.34
HMGN1-219ENST00000491183 PLEKHD1A6NEE1 506 aa29.62■■■□□ 2.33
HMGN1-219ENST00000491183 ARAP3Q8WWN8 1544 aa29.57■■■□□ 2.32
HMGN1-219ENST00000491183 FMN1Q68DA7 1419 aa29.54■■■□□ 2.32
HMGN1-219ENST00000491183 CDK13Q14004 1512 aaKnown RBP29.54■■■□□ 2.32
HMGN1-219ENST00000491183 PHLDB1Q86UU1 1377 aa29.52■■■□□ 2.32
HMGN1-219ENST00000491183 ADGRL1O94910 1474 aa29.5■■■□□ 2.31
HMGN1-219ENST00000491183 ATP1B4Q9UN42 357 aaPredicted RBP29.5■■■□□ 2.31
HMGN1-219ENST00000491183 NEO1Q92859 1461 aa29.48■■■□□ 2.31
HMGN1-219ENST00000491183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.47■■■□□ 2.311e-6■■■■□ 20.1
HMGN1-219ENST00000491183 HECW1Q76N89 1606 aa29.45■■■□□ 2.31
HMGN1-219ENST00000491183 RAPGEF3O95398 923 aa29.44■■■□□ 2.3
HMGN1-219ENST00000491183 TTC37Q6PGP7 1564 aa29.41■■■□□ 2.3
HMGN1-219ENST00000491183 LRRIQ1Q96JM4 1722 aa29.37■■■□□ 2.29
HMGN1-219ENST00000491183 FRMPD1Q5SYB0 1578 aa29.35■■■□□ 2.29
HMGN1-219ENST00000491183 AKNAQ7Z591 1439 aa29.35■■■□□ 2.29
HMGN1-219ENST00000491183 FANCAO15360 1455 aa29.35■■■□□ 2.29
HMGN1-219ENST00000491183 CDK11AQ9UQ88 783 aaPredicted RBP29.33■■■□□ 2.29
HMGN1-219ENST00000491183 CFAP74Q9C0B2 1584 aa29.3■■■□□ 2.28
HMGN1-219ENST00000491183 PLCH2O75038 1416 aa29.29■■■□□ 2.28
HMGN1-219ENST00000491183 DENND4BO75064 1496 aaPredicted RBP29.29■■■□□ 2.28
HMGN1-219ENST00000491183 CASKIN1Q8WXD9 1431 aa29.28■■■□□ 2.28
HMGN1-219ENST00000491183 TROQ12816 1431 aaPredicted RBP29.28■■■□□ 2.28
HMGN1-219ENST00000491183 PCF11O94913 1555 aaKnown RBP29.27■■■□□ 2.28
HMGN1-219ENST00000491183 RICTORQ6R327 1708 aa29.27■■■□□ 2.28
HMGN1-219ENST00000491183 CLIP1P30622 1438 aa29.27■■■□□ 2.28
HMGN1-219ENST00000491183 KIF14Q15058 1648 aa29.27■■■□□ 2.28
HMGN1-219ENST00000491183 MYO5CQ9NQX4 1742 aa29.2■■■□□ 2.27
HMGN1-219ENST00000491183 CCDC18Q5T9S5 1454 aa29.19■■■□□ 2.26
HMGN1-219ENST00000491183 EFCAB2Q5VUJ9 269 aa29.18■■■□□ 2.26
HMGN1-219ENST00000491183 SCAPERQ9BY12 1400 aa29.17■■■□□ 2.26
HMGN1-219ENST00000491183 FYCO1Q9BQS8 1478 aa29.16■■■□□ 2.26
HMGN1-219ENST00000491183 ZMYM4Q5VZL5 1548 aa29.14■■■□□ 2.25
HMGN1-219ENST00000491183 ARHGEF40Q8TER5 1519 aa29.13■■■□□ 2.25
HMGN1-219ENST00000491183 ADAMTSL3P82987 1691 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms