RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 KDM6BO15054 1643 aa21.61■■□□□ 1.05
TMCO3-208ENST00000491166 KIF27Q86VH2 1401 aa21.6■■□□□ 1.05
TMCO3-208ENST00000491166 ABCC10Q5T3U5 1492 aa21.58■■□□□ 1.05
TMCO3-208ENST00000491166 SHROOM2Q13796 1616 aa21.57■■□□□ 1.04
TMCO3-208ENST00000491166 IGF1RP08069 1367 aa21.57■■□□□ 1.04
TMCO3-208ENST00000491166 DIP2BQ9P265 1576 aa21.53■■□□□ 1.04
TMCO3-208ENST00000491166 JPH4Q96JJ6 628 aa21.51■■□□□ 1.03
TMCO3-208ENST00000491166 PRG4Q92954 1404 aaPredicted RBP21.51■■□□□ 1.03
TMCO3-208ENST00000491166 TSPOAP1O95153 1857 aa21.51■■□□□ 1.03
TMCO3-208ENST00000491166 NPM1P06748 294 aaKnown RBP eCLIP21.49■■□□□ 1.03
TMCO3-208ENST00000491166 RUSC2Q8N2Y8 1516 aa21.49■■□□□ 1.03
TMCO3-208ENST00000491166 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
TMCO3-208ENST00000491166 CUL7Q14999 1698 aa21.45■■□□□ 1.02
TMCO3-208ENST00000491166 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
TMCO3-208ENST00000491166 ADGRL1O94910 1474 aa21.43■■□□□ 1.02
TMCO3-208ENST00000491166 HECW2Q9P2P5 1572 aa21.43■■□□□ 1.02
TMCO3-208ENST00000491166 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.01
TMCO3-208ENST00000491166 ADCY10Q96PN6 1610 aa21.37■■□□□ 1.01
TMCO3-208ENST00000491166 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
TMCO3-208ENST00000491166 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
TMCO3-208ENST00000491166 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
TMCO3-208ENST00000491166 IQGAP2Q13576 1575 aa21.23■□□□□ 0.99
TMCO3-208ENST00000491166 PTPRGP23470 1445 aa21.19■□□□□ 0.98
TMCO3-208ENST00000491166 CARMIL2Q6F5E8 1435 aa21.17■□□□□ 0.98
TMCO3-208ENST00000491166 PPRC1Q5VV67 1664 aaKnown RBP21.17■□□□□ 0.98
TMCO3-208ENST00000491166 TNIKQ9UKE5 1360 aa21.15■□□□□ 0.98
TMCO3-208ENST00000491166 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
TMCO3-208ENST00000491166 DISP1Q96F81 1524 aa21.13■□□□□ 0.97
TMCO3-208ENST00000491166 PRXQ9BXM0 1461 aa21.09■□□□□ 0.97
TMCO3-208ENST00000491166 UGGT2Q9NYU1 1516 aa21.09■□□□□ 0.97
TMCO3-208ENST00000491166 ASXL2Q76L83 1435 aa21.07■□□□□ 0.96
TMCO3-208ENST00000491166 KIAA0556O60303 1618 aa21.04■□□□□ 0.96
TMCO3-208ENST00000491166 GLI2P10070 1586 aa21.04■□□□□ 0.96
TMCO3-208ENST00000491166 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.96
TMCO3-208ENST00000491166 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.96
TMCO3-208ENST00000491166 ABCC2Q92887 1545 aa21.02■□□□□ 0.96
TMCO3-208ENST00000491166 UACAQ9BZF9 1416 aa21.02■□□□□ 0.96
TMCO3-208ENST00000491166 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
TMCO3-208ENST00000491166 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
TMCO3-208ENST00000491166 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
TMCO3-208ENST00000491166 UHRF1BP1LA0JNW5 1464 aa20.97■□□□□ 0.95
TMCO3-208ENST00000491166 MAP3K4Q9Y6R4 1608 aa20.93■□□□□ 0.94
TMCO3-208ENST00000491166 P3H3Q8IVL6 736 aa20.93■□□□□ 0.94
TMCO3-208ENST00000491166 TEX14Q8IWB6 1497 aa20.93■□□□□ 0.94
TMCO3-208ENST00000491166 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
TMCO3-208ENST00000491166 EPRSP07814 1512 aaKnown RBP20.91■□□□□ 0.94
TMCO3-208ENST00000491166 KDM5BQ9UGL1 1544 aa20.89■□□□□ 0.94
TMCO3-208ENST00000491166 EEA1Q15075 1411 aa20.88■□□□□ 0.93
TMCO3-208ENST00000491166 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
TMCO3-208ENST00000491166 ZCCHC11Q5TAX3 1644 aaKnown RBP20.87■□□□□ 0.93
TMCO3-208ENST00000491166 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
TMCO3-208ENST00000491166 ARID3CA6NKF2 412 aa20.84■□□□□ 0.93
TMCO3-208ENST00000491166 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
TMCO3-208ENST00000491166 KIF21BO75037 1637 aa20.84■□□□□ 0.93
TMCO3-208ENST00000491166 ILDR2Q71H61 639 aa20.83■□□□□ 0.93
TMCO3-208ENST00000491166 ABCA8O94911 1581 aa20.83■□□□□ 0.92
TMCO3-208ENST00000491166 SOCS7O14512 581 aa20.78■□□□□ 0.92
TMCO3-208ENST00000491166 WDR7Q9Y4E6 1490 aa20.77■□□□□ 0.92
TMCO3-208ENST00000491166 DISP3Q9P2K9 1392 aa20.76■□□□□ 0.91
TMCO3-208ENST00000491166 KCNH8Q96L42 1107 aa20.75■□□□□ 0.91
TMCO3-208ENST00000491166 SAMD9Q5K651 1589 aa20.75■□□□□ 0.91
TMCO3-208ENST00000491166 PTPRMP28827 1452 aa20.74■□□□□ 0.91
TMCO3-208ENST00000491166 FHOD3Q2V2M9 1422 aa20.72■□□□□ 0.91
TMCO3-208ENST00000491166 ATP10BO94823 1461 aa20.69■□□□□ 0.9
TMCO3-208ENST00000491166 CD109Q6YHK3 1445 aa20.68■□□□□ 0.9
TMCO3-208ENST00000491166 PCF11O94913 1555 aaKnown RBP20.68■□□□□ 0.9
TMCO3-208ENST00000491166 UBTFP17480 764 aaKnown RBP20.66■□□□□ 0.9
TMCO3-208ENST00000491166 ADAMTSL3P82987 1691 aa20.64■□□□□ 0.9
TMCO3-208ENST00000491166 RAPGEF6Q8TEU7 1601 aa20.64■□□□□ 0.9
TMCO3-208ENST00000491166 MAGI3Q5TCQ9 1506 aa20.64■□□□□ 0.9
TMCO3-208ENST00000491166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
TMCO3-208ENST00000491166 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.89
TMCO3-208ENST00000491166 CFAP43Q8NDM7 1665 aa20.62■□□□□ 0.89
TMCO3-208ENST00000491166 CERKQ8TCT0 537 aa20.62■□□□□ 0.89
TMCO3-208ENST00000491166 HSPA2P54652 639 aa20.61■□□□□ 0.89
TMCO3-208ENST00000491166 NUP153P49790 1475 aaKnown RBP20.6■□□□□ 0.89
TMCO3-208ENST00000491166 MADDQ8WXG6 1647 aa20.57■□□□□ 0.88
TMCO3-208ENST00000491166 EFCAB5A4FU69 1503 aa20.57■□□□□ 0.88
TMCO3-208ENST00000491166 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
TMCO3-208ENST00000491166 ARID4BQ4LE39 1312 aaPredicted RBP20.54■□□□□ 0.88
TMCO3-208ENST00000491166 BCORL1Q5H9F3 1711 aa20.52■□□□□ 0.88
TMCO3-208ENST00000491166 ARAP3Q8WWN8 1544 aa20.51■□□□□ 0.87
TMCO3-208ENST00000491166 ARHGAP35Q9NRY4 1499 aa20.5■□□□□ 0.87
TMCO3-208ENST00000491166 ATP1B4Q9UN42 357 aaPredicted RBP20.49■□□□□ 0.87
TMCO3-208ENST00000491166 SPATA31D1Q6ZQQ2 1576 aa20.49■□□□□ 0.87
TMCO3-208ENST00000491166 RIMS1Q86UR5 1692 aaKnown RBP20.48■□□□□ 0.87
TMCO3-208ENST00000491166 CDK13Q14004 1512 aaKnown RBP20.48■□□□□ 0.87
TMCO3-208ENST00000491166 ABCA9Q8IUA7 1624 aa20.47■□□□□ 0.87
TMCO3-208ENST00000491166 RAPGEF3O95398 923 aa20.47■□□□□ 0.87
TMCO3-208ENST00000491166 PLEKHD1A6NEE1 506 aa20.46■□□□□ 0.87
TMCO3-208ENST00000491166 FMN1Q68DA7 1419 aa20.41■□□□□ 0.86
TMCO3-208ENST00000491166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.37■□□□□ 0.85
TMCO3-208ENST00000491166 HECW1Q76N89 1606 aa20.36■□□□□ 0.85
TMCO3-208ENST00000491166 TTC37Q6PGP7 1564 aa20.35■□□□□ 0.85
TMCO3-208ENST00000491166 NEO1Q92859 1461 aa20.35■□□□□ 0.85
TMCO3-208ENST00000491166 FRMPD1Q5SYB0 1578 aa20.34■□□□□ 0.85
TMCO3-208ENST00000491166 PHLDB1Q86UU1 1377 aa20.32■□□□□ 0.84
TMCO3-208ENST00000491166 FANCAO15360 1455 aa20.3■□□□□ 0.84
TMCO3-208ENST00000491166 ARHGEF40Q8TER5 1519 aa20.28■□□□□ 0.84
TMCO3-208ENST00000491166 AKNAQ7Z591 1439 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms