RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
TRAIP-211ENST00000491060 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
TRAIP-211ENST00000491060 TTBK1Q5TCY1 1321 aaPredicted RBP23.26■■□□□ 1.31
TRAIP-211ENST00000491060 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
TRAIP-211ENST00000491060 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
TRAIP-211ENST00000491060 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
TRAIP-211ENST00000491060 IQGAP2Q13576 1575 aa23.06■■□□□ 1.28
TRAIP-211ENST00000491060 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
TRAIP-211ENST00000491060 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
TRAIP-211ENST00000491060 CTTNBP2Q8WZ74 1663 aa22.98■■□□□ 1.27
TRAIP-211ENST00000491060 NPM1P06748 294 aaKnown RBP eCLIP22.96■■□□□ 1.27
TRAIP-211ENST00000491060 KIF13AQ9H1H9 1805 aa22.95■■□□□ 1.26
TRAIP-211ENST00000491060 PTPRGP23470 1445 aa22.94■■□□□ 1.26
TRAIP-211ENST00000491060 CARMIL2Q6F5E8 1435 aa22.94■■□□□ 1.26
TRAIP-211ENST00000491060 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
TRAIP-211ENST00000491060 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.26
TRAIP-211ENST00000491060 DISP1Q96F81 1524 aa22.89■■□□□ 1.26
TRAIP-211ENST00000491060 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
TRAIP-211ENST00000491060 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
TRAIP-211ENST00000491060 TSPOAP1O95153 1857 aa22.85■■□□□ 1.25
TRAIP-211ENST00000491060 FAM69CQ0P6D2 419 aa22.84■■□□□ 1.25
TRAIP-211ENST00000491060 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
TRAIP-211ENST00000491060 UGGT2Q9NYU1 1516 aa22.83■■□□□ 1.25
TRAIP-211ENST00000491060 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.25
TRAIP-211ENST00000491060 P3H3Q8IVL6 736 aa22.81■■□□□ 1.24
TRAIP-211ENST00000491060 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
TRAIP-211ENST00000491060 DIP2BQ9P265 1576 aa22.77■■□□□ 1.24
TRAIP-211ENST00000491060 UACAQ9BZF9 1416 aa22.75■■□□□ 1.23
TRAIP-211ENST00000491060 ABCC10Q5T3U5 1492 aa22.75■■□□□ 1.23
TRAIP-211ENST00000491060 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
TRAIP-211ENST00000491060 ABCC2Q92887 1545 aa22.73■■□□□ 1.23
TRAIP-211ENST00000491060 ARID3CA6NKF2 412 aa22.72■■□□□ 1.23
TRAIP-211ENST00000491060 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
TRAIP-211ENST00000491060 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
TRAIP-211ENST00000491060 PLB1Q6P1J6 1458 aa22.69■■□□□ 1.22
TRAIP-211ENST00000491060 ASXL2Q76L83 1435 aa22.68■■□□□ 1.22
TRAIP-211ENST00000491060 EEA1Q15075 1411 aa22.66■■□□□ 1.22
TRAIP-211ENST00000491060 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
TRAIP-211ENST00000491060 KDM5BQ9UGL1 1544 aa22.58■■□□□ 1.21
TRAIP-211ENST00000491060 ABCA8O94911 1581 aa22.58■■□□□ 1.2
TRAIP-211ENST00000491060 KIF21BO75037 1637 aa22.57■■□□□ 1.2
TRAIP-211ENST00000491060 KCNH8Q96L42 1107 aa22.56■■□□□ 1.2
TRAIP-211ENST00000491060 SAMD9Q5K651 1589 aa22.55■■□□□ 1.2
TRAIP-211ENST00000491060 UBTFP17480 764 aaKnown RBP22.55■■□□□ 1.2
TRAIP-211ENST00000491060 KDM6BO15054 1643 aa22.55■■□□□ 1.2
TRAIP-211ENST00000491060 FHOD3Q2V2M9 1422 aa22.54■■□□□ 1.2
TRAIP-211ENST00000491060 PPRC1Q5VV67 1664 aaKnown RBP22.53■■□□□ 1.2
TRAIP-211ENST00000491060 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.2
TRAIP-211ENST00000491060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
TRAIP-211ENST00000491060 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
TRAIP-211ENST00000491060 WDR7Q9Y4E6 1490 aa22.48■■□□□ 1.19
TRAIP-211ENST00000491060 GLI2P10070 1586 aa22.48■■□□□ 1.19
TRAIP-211ENST00000491060 RAPGEF6Q8TEU7 1601 aa22.47■■□□□ 1.19
TRAIP-211ENST00000491060 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
TRAIP-211ENST00000491060 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
TRAIP-211ENST00000491060 ATP10BO94823 1461 aa22.41■■□□□ 1.18
TRAIP-211ENST00000491060 ATP1B4Q9UN42 357 aaPredicted RBP22.4■■□□□ 1.18
TRAIP-211ENST00000491060 CFAP43Q8NDM7 1665 aa22.35■■□□□ 1.17
TRAIP-211ENST00000491060 EFCAB5A4FU69 1503 aa22.35■■□□□ 1.17
TRAIP-211ENST00000491060 NUP153P49790 1475 aaKnown RBP22.34■■□□□ 1.17
TRAIP-211ENST00000491060 CD109Q6YHK3 1445 aa22.33■■□□□ 1.17
TRAIP-211ENST00000491060 TEX14Q8IWB6 1497 aa22.32■■□□□ 1.16
TRAIP-211ENST00000491060 COL17A1Q9UMD9 1497 aaPredicted RBP22.31■■□□□ 1.16
TRAIP-211ENST00000491060 CDK13Q14004 1512 aaKnown RBP22.27■■□□□ 1.16
TRAIP-211ENST00000491060 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.16
TRAIP-211ENST00000491060 ABCA9Q8IUA7 1624 aa22.21■■□□□ 1.15
TRAIP-211ENST00000491060 MAGI3Q5TCQ9 1506 aa22.21■■□□□ 1.15
TRAIP-211ENST00000491060 PLEKHD1A6NEE1 506 aa22.2■■□□□ 1.14
TRAIP-211ENST00000491060 HECW1Q76N89 1606 aa22.17■■□□□ 1.14
TRAIP-211ENST00000491060 LRRIQ1Q96JM4 1722 aa22.16■■□□□ 1.14
TRAIP-211ENST00000491060 KDM4FA0A1W2PPD8 638 aa22.15■■□□□ 1.14
TRAIP-211ENST00000491060 FMN1Q68DA7 1419 aa22.14■■□□□ 1.14
TRAIP-211ENST00000491060 TTC37Q6PGP7 1564 aa22.13■■□□□ 1.13
TRAIP-211ENST00000491060 PCF11O94913 1555 aaKnown RBP22.1■■□□□ 1.13
TRAIP-211ENST00000491060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.1■■□□□ 1.13
TRAIP-211ENST00000491060 ADGRL1O94910 1474 aa22.09■■□□□ 1.13
TRAIP-211ENST00000491060 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
TRAIP-211ENST00000491060 CLIP1P30622 1438 aa22.06■■□□□ 1.12
TRAIP-211ENST00000491060 KIF14Q15058 1648 aa22.06■■□□□ 1.12
TRAIP-211ENST00000491060 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
TRAIP-211ENST00000491060 FANCAO15360 1455 aa22■■□□□ 1.11
TRAIP-211ENST00000491060 NEO1Q92859 1461 aa22■■□□□ 1.11
TRAIP-211ENST00000491060 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
TRAIP-211ENST00000491060 FRMPD1Q5SYB0 1578 aa21.99■■□□□ 1.11
TRAIP-211ENST00000491060 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
TRAIP-211ENST00000491060 AKNAQ7Z591 1439 aa21.97■■□□□ 1.11
TRAIP-211ENST00000491060 LOC105371045A0A1W2PR82 267 aa21.97■■□□□ 1.11
TRAIP-211ENST00000491060 CFAP74Q9C0B2 1584 aa21.96■■□□□ 1.11
TRAIP-211ENST00000491060 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
TRAIP-211ENST00000491060 RICTORQ6R327 1708 aa21.94■■□□□ 1.1
TRAIP-211ENST00000491060 TROQ12816 1431 aaPredicted RBP21.93■■□□□ 1.1
TRAIP-211ENST00000491060 ARID4BQ4LE39 1312 aaPredicted RBP21.93■■□□□ 1.1
TRAIP-211ENST00000491060 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
TRAIP-211ENST00000491060 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
TRAIP-211ENST00000491060 ARHGAP5Q13017 1502 aa21.9■■□□□ 1.1
TRAIP-211ENST00000491060 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
TRAIP-211ENST00000491060 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
TRAIP-211ENST00000491060 CEP162Q5TB80 1403 aa21.89■■□□□ 1.1
TRAIP-211ENST00000491060 PLCH2O75038 1416 aa21.89■■□□□ 1.09
TRAIP-211ENST00000491060 SCAPERQ9BY12 1400 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 281.3 ms