RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 CUL7Q14999 1698 aa15.14■□□□□ 0.01
PCOLCE-209ENST00000490909 DIP2BQ9P265 1576 aa15.11■□□□□ 0.01
PCOLCE-209ENST00000490909 MAPKBP1O60336 1514 aa15.1■□□□□ 0.01
PCOLCE-209ENST00000490909 ABCC10Q5T3U5 1492 aa15.05■□□□□ -0
PCOLCE-209ENST00000490909 KIAA0586Q9BVV6 1533 aa15.05■□□□□ -0
PCOLCE-209ENST00000490909 JPH4Q96JJ6 628 aa15.04■□□□□ -0
PCOLCE-209ENST00000490909 IGF1RP08069 1367 aa15.02■□□□□ -0
PCOLCE-209ENST00000490909 KIF27Q86VH2 1401 aa15.01□□□□□ -0.01
PCOLCE-209ENST00000490909 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
PCOLCE-209ENST00000490909 TSPOAP1O95153 1857 aa14.98□□□□□ -0.01
PCOLCE-209ENST00000490909 IQGAP2Q13576 1575 aa14.97□□□□□ -0.01
PCOLCE-209ENST00000490909 PPRC1Q5VV67 1664 aaKnown RBP14.96□□□□□ -0.01
PCOLCE-209ENST00000490909 KDM6BO15054 1643 aa14.95□□□□□ -0.02
PCOLCE-209ENST00000490909 DISP1Q96F81 1524 aa14.91□□□□□ -0.02
PCOLCE-209ENST00000490909 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
PCOLCE-209ENST00000490909 FAM69CQ0P6D2 419 aa14.9□□□□□ -0.02
PCOLCE-209ENST00000490909 ABCC2Q92887 1545 aa14.9□□□□□ -0.02
PCOLCE-209ENST00000490909 KIAA0556O60303 1618 aa14.88□□□□□ -0.03
PCOLCE-209ENST00000490909 PTPRGP23470 1445 aa14.86□□□□□ -0.03
PCOLCE-209ENST00000490909 CTTNBP2Q8WZ74 1663 aa14.86□□□□□ -0.03
PCOLCE-209ENST00000490909 GLI2P10070 1586 aa14.85□□□□□ -0.03
PCOLCE-209ENST00000490909 UHRF1BP1LA0JNW5 1464 aa14.85□□□□□ -0.03
PCOLCE-209ENST00000490909 UGGT2Q9NYU1 1516 aa14.85□□□□□ -0.03
PCOLCE-209ENST00000490909 TNIKQ9UKE5 1360 aa14.85□□□□□ -0.03
PCOLCE-209ENST00000490909 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
PCOLCE-209ENST00000490909 MAP3K4Q9Y6R4 1608 aa14.84□□□□□ -0.03
PCOLCE-209ENST00000490909 ASXL2Q76L83 1435 aa14.83□□□□□ -0.03
PCOLCE-209ENST00000490909 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.04
PCOLCE-209ENST00000490909 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
PCOLCE-209ENST00000490909 RAPGEF2Q9Y4G8 1499 aa14.81□□□□□ -0.04
PCOLCE-209ENST00000490909 KDM5BQ9UGL1 1544 aa14.8□□□□□ -0.04
PCOLCE-209ENST00000490909 PLB1Q6P1J6 1458 aa14.79□□□□□ -0.04
PCOLCE-209ENST00000490909 UACAQ9BZF9 1416 aa14.79□□□□□ -0.04
PCOLCE-209ENST00000490909 EPRSP07814 1512 aaKnown RBP14.77□□□□□ -0.04
PCOLCE-209ENST00000490909 TTBK1Q5TCY1 1321 aaPredicted RBP14.77□□□□□ -0.04
PCOLCE-209ENST00000490909 KDM4FA0A1W2PPD8 638 aa14.74□□□□□ -0.05
PCOLCE-209ENST00000490909 COL17A1Q9UMD9 1497 aaPredicted RBP14.74□□□□□ -0.05
PCOLCE-209ENST00000490909 ABCA8O94911 1581 aa14.72□□□□□ -0.05
PCOLCE-209ENST00000490909 WDR7Q9Y4E6 1490 aa14.69□□□□□ -0.06
PCOLCE-209ENST00000490909 ADGRL1O94910 1474 aa14.69□□□□□ -0.06
PCOLCE-209ENST00000490909 CFAP43Q8NDM7 1665 aa14.68□□□□□ -0.06
PCOLCE-209ENST00000490909 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
PCOLCE-209ENST00000490909 TEX14Q8IWB6 1497 aa14.65□□□□□ -0.06
PCOLCE-209ENST00000490909 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
PCOLCE-209ENST00000490909 SAMD9Q5K651 1589 aa14.61□□□□□ -0.07
PCOLCE-209ENST00000490909 MAGI3Q5TCQ9 1506 aa14.6□□□□□ -0.07
PCOLCE-209ENST00000490909 KIF21BO75037 1637 aa14.59□□□□□ -0.07
PCOLCE-209ENST00000490909 HECW2Q9P2P5 1572 aa14.56□□□□□ -0.08
PCOLCE-209ENST00000490909 ABCA9Q8IUA7 1624 aa14.55□□□□□ -0.08
PCOLCE-209ENST00000490909 RAPGEF6Q8TEU7 1601 aa14.54□□□□□ -0.08
PCOLCE-209ENST00000490909 CD109Q6YHK3 1445 aa14.53□□□□□ -0.08
PCOLCE-209ENST00000490909 FRMPD1Q5SYB0 1578 aa14.51□□□□□ -0.09
PCOLCE-209ENST00000490909 ATP10BO94823 1461 aa14.5□□□□□ -0.09
PCOLCE-209ENST00000490909 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
PCOLCE-209ENST00000490909 ARAP3Q8WWN8 1544 aa14.49□□□□□ -0.09
PCOLCE-209ENST00000490909 NUP153P49790 1475 aaKnown RBP14.47□□□□□ -0.09
PCOLCE-209ENST00000490909 ARID3CA6NKF2 412 aa14.45□□□□□ -0.1
PCOLCE-209ENST00000490909 KCNH8Q96L42 1107 aa14.44□□□□□ -0.1
PCOLCE-209ENST00000490909 ADAMTSL3P82987 1691 aa14.44□□□□□ -0.1
PCOLCE-209ENST00000490909 FHOD3Q2V2M9 1422 aa14.42□□□□□ -0.1
PCOLCE-209ENST00000490909 RICTORQ6R327 1708 aa14.42□□□□□ -0.1
PCOLCE-209ENST00000490909 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
PCOLCE-209ENST00000490909 TTC37Q6PGP7 1564 aa14.41□□□□□ -0.1
PCOLCE-209ENST00000490909 ARHGEF40Q8TER5 1519 aa14.41□□□□□ -0.1
PCOLCE-209ENST00000490909 BCORL1Q5H9F3 1711 aa14.4□□□□□ -0.1
PCOLCE-209ENST00000490909 SIGLEC1Q9BZZ2 1709 aa14.4□□□□□ -0.1
PCOLCE-209ENST00000490909 NEO1Q92859 1461 aa14.39□□□□□ -0.11
PCOLCE-209ENST00000490909 MADDQ8WXG6 1647 aa14.39□□□□□ -0.11
PCOLCE-209ENST00000490909 EFCAB5A4FU69 1503 aa14.38□□□□□ -0.11
PCOLCE-209ENST00000490909 EEA1Q15075 1411 aa14.38□□□□□ -0.11
PCOLCE-209ENST00000490909 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
PCOLCE-209ENST00000490909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.36□□□□□ -0.111e-9■■■■■ 62
PCOLCE-209ENST00000490909 CFAP74Q9C0B2 1584 aa14.34□□□□□ -0.11
PCOLCE-209ENST00000490909 PTPRMP28827 1452 aa14.34□□□□□ -0.11
PCOLCE-209ENST00000490909 CDK13Q14004 1512 aaKnown RBP14.34□□□□□ -0.11
PCOLCE-209ENST00000490909 ZMYM4Q5VZL5 1548 aa14.33□□□□□ -0.12
PCOLCE-209ENST00000490909 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.12
PCOLCE-209ENST00000490909 PHLDB1Q86UU1 1377 aa14.32□□□□□ -0.12
PCOLCE-209ENST00000490909 LRRIQ1Q96JM4 1722 aa14.31□□□□□ -0.12
PCOLCE-209ENST00000490909 RAPGEF3O95398 923 aa14.3□□□□□ -0.12
PCOLCE-209ENST00000490909 FANCAO15360 1455 aa14.29□□□□□ -0.12
PCOLCE-209ENST00000490909 PCF11O94913 1555 aaKnown RBP14.28□□□□□ -0.12
PCOLCE-209ENST00000490909 HECW1Q76N89 1606 aa14.27□□□□□ -0.12
PCOLCE-209ENST00000490909 LMTK3Q96Q04 1460 aa14.27□□□□□ -0.12
PCOLCE-209ENST00000490909 RANGAP1P46060 587 aaPredicted RBP14.27□□□□□ -0.13
PCOLCE-209ENST00000490909 MYO5CQ9NQX4 1742 aa14.27□□□□□ -0.13
PCOLCE-209ENST00000490909 KIF14Q15058 1648 aa14.26□□□□□ -0.13
PCOLCE-209ENST00000490909 DENND4BO75064 1496 aaPredicted RBP14.26□□□□□ -0.13
PCOLCE-209ENST00000490909 ZFYVE16Q7Z3T8 1539 aa14.25□□□□□ -0.13
PCOLCE-209ENST00000490909 AKNAQ7Z591 1439 aa14.25□□□□□ -0.13
PCOLCE-209ENST00000490909 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
PCOLCE-209ENST00000490909 FER1L4A9Z1Z3 1794 aa14.24□□□□□ -0.13
PCOLCE-209ENST00000490909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
PCOLCE-209ENST00000490909 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
PCOLCE-209ENST00000490909 FAM9AQ8IZU1 332 aaPredicted RBP14.23□□□□□ -0.13
PCOLCE-209ENST00000490909 ARHGAP35Q9NRY4 1499 aa14.23□□□□□ -0.13
PCOLCE-209ENST00000490909 POGZQ7Z3K3 1410 aa14.22□□□□□ -0.13
PCOLCE-209ENST00000490909 KDM5CP41229 1560 aa14.17□□□□□ -0.14
PCOLCE-209ENST00000490909 MAGI2Q86UL8 1455 aa14.17□□□□□ -0.14
PCOLCE-209ENST00000490909 PLCH2O75038 1416 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms