RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
VPS26A-207ENST00000490696 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
VPS26A-207ENST00000490696 KIAA0586Q9BVV6 1533 aa25.97■■□□□ 1.75
VPS26A-207ENST00000490696 JPH4Q96JJ6 628 aa25.96■■□□□ 1.75
VPS26A-207ENST00000490696 RAPGEF2Q9Y4G8 1499 aa25.96■■□□□ 1.75
VPS26A-207ENST00000490696 PRG4Q92954 1404 aaPredicted RBP25.91■■□□□ 1.74
VPS26A-207ENST00000490696 PRXQ9BXM0 1461 aa25.88■■□□□ 1.73
VPS26A-207ENST00000490696 EEA1Q15075 1411 aa25.83■■□□□ 1.73
VPS26A-207ENST00000490696 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
VPS26A-207ENST00000490696 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
VPS26A-207ENST00000490696 TRHP20396 242 aaPredicted RBP25.76■■□□□ 1.71
VPS26A-207ENST00000490696 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
VPS26A-207ENST00000490696 UGGT2Q9NYU1 1516 aa25.68■■□□□ 1.7
VPS26A-207ENST00000490696 CARMIL2Q6F5E8 1435 aa25.67■■□□□ 1.7
VPS26A-207ENST00000490696 CTTNBP2Q8WZ74 1663 aa25.67■■□□□ 1.7
VPS26A-207ENST00000490696 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
VPS26A-207ENST00000490696 TNIKQ9UKE5 1360 aa25.6■■□□□ 1.69
VPS26A-207ENST00000490696 PTPRGP23470 1445 aa25.6■■□□□ 1.69
VPS26A-207ENST00000490696 KIF21BO75037 1637 aa25.56■■□□□ 1.68
VPS26A-207ENST00000490696 KIAA0556O60303 1618 aa25.55■■□□□ 1.68
VPS26A-207ENST00000490696 ADCY10Q96PN6 1610 aa25.52■■□□□ 1.68
VPS26A-207ENST00000490696 GOLGA3Q08378 1498 aa25.5■■□□□ 1.67
VPS26A-207ENST00000490696 TTBK1Q5TCY1 1321 aaPredicted RBP25.5■■□□□ 1.67
VPS26A-207ENST00000490696 UACAQ9BZF9 1416 aa25.43■■□□□ 1.66
VPS26A-207ENST00000490696 UHRF1BP1LA0JNW5 1464 aa25.42■■□□□ 1.66
VPS26A-207ENST00000490696 NPM1P06748 294 aaKnown RBP eCLIP25.42■■□□□ 1.66
VPS26A-207ENST00000490696 ABCC2Q92887 1545 aa25.38■■□□□ 1.65
VPS26A-207ENST00000490696 SAMD9Q5K651 1589 aa25.38■■□□□ 1.65
VPS26A-207ENST00000490696 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
VPS26A-207ENST00000490696 EHMT2Q96KQ7 1210 aa25.35■■□□□ 1.65
VPS26A-207ENST00000490696 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
VPS26A-207ENST00000490696 UBTFP17480 764 aaKnown RBP25.33■■□□□ 1.65
VPS26A-207ENST00000490696 PLB1Q6P1J6 1458 aa25.33■■□□□ 1.65
VPS26A-207ENST00000490696 RANGAP1P46060 587 aaPredicted RBP25.3■■□□□ 1.64
VPS26A-207ENST00000490696 KDM5BQ9UGL1 1544 aa25.3■■□□□ 1.64
VPS26A-207ENST00000490696 ABCA8O94911 1581 aa25.3■■□□□ 1.64
VPS26A-207ENST00000490696 ABCC10Q5T3U5 1492 aa25.28■■□□□ 1.64
VPS26A-207ENST00000490696 EFCAB5A4FU69 1503 aa25.25■■□□□ 1.63
VPS26A-207ENST00000490696 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
VPS26A-207ENST00000490696 FHOD3Q2V2M9 1422 aa25.23■■□□□ 1.63
VPS26A-207ENST00000490696 ASXL2Q76L83 1435 aa25.22■■□□□ 1.63
VPS26A-207ENST00000490696 DIP2BQ9P265 1576 aa25.22■■□□□ 1.63
VPS26A-207ENST00000490696 FAM69CQ0P6D2 419 aa25.21■■□□□ 1.63
VPS26A-207ENST00000490696 ZCCHC11Q5TAX3 1644 aaKnown RBP25.21■■□□□ 1.63
VPS26A-207ENST00000490696 ARHGAP35Q9NRY4 1499 aa25.14■■□□□ 1.61
VPS26A-207ENST00000490696 RAPGEF6Q8TEU7 1601 aa25.13■■□□□ 1.61
VPS26A-207ENST00000490696 ATP10BO94823 1461 aa25.09■■□□□ 1.61
VPS26A-207ENST00000490696 WDR7Q9Y4E6 1490 aa25.09■■□□□ 1.61
VPS26A-207ENST00000490696 EPRSP07814 1512 aaKnown RBP25.08■■□□□ 1.61
VPS26A-207ENST00000490696 GLI2P10070 1586 aa25.08■■□□□ 1.61
VPS26A-207ENST00000490696 NUP153P49790 1475 aaKnown RBP25.08■■□□□ 1.6
VPS26A-207ENST00000490696 ARID3CA6NKF2 412 aa25.06■■□□□ 1.6
VPS26A-207ENST00000490696 FMN1Q68DA7 1419 aa25.02■■□□□ 1.6
VPS26A-207ENST00000490696 TSPOAP1O95153 1857 aa24.97■■□□□ 1.59
VPS26A-207ENST00000490696 CLIP1P30622 1438 aa24.95■■□□□ 1.59
VPS26A-207ENST00000490696 MAP3K4Q9Y6R4 1608 aa24.95■■□□□ 1.58
VPS26A-207ENST00000490696 KCNH8Q96L42 1107 aa24.95■■□□□ 1.58
VPS26A-207ENST00000490696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
VPS26A-207ENST00000490696 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
VPS26A-207ENST00000490696 PPRC1Q5VV67 1664 aaKnown RBP24.93■■□□□ 1.58
VPS26A-207ENST00000490696 HECW1Q76N89 1606 aa24.89■■□□□ 1.57
VPS26A-207ENST00000490696 CDK13Q14004 1512 aaKnown RBP24.87■■□□□ 1.57
VPS26A-207ENST00000490696 LOC105371045A0A1W2PR82 267 aa24.87■■□□□ 1.57
VPS26A-207ENST00000490696 CFAP43Q8NDM7 1665 aa24.86■■□□□ 1.57
VPS26A-207ENST00000490696 CD109Q6YHK3 1445 aa24.86■■□□□ 1.57
VPS26A-207ENST00000490696 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
VPS26A-207ENST00000490696 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
VPS26A-207ENST00000490696 TEX14Q8IWB6 1497 aa24.83■■□□□ 1.57
VPS26A-207ENST00000490696 CEP162Q5TB80 1403 aa24.83■■□□□ 1.57
VPS26A-207ENST00000490696 CASKIN1Q8WXD9 1431 aa24.83■■□□□ 1.57
VPS26A-207ENST00000490696 MAGI3Q5TCQ9 1506 aa24.82■■□□□ 1.56
VPS26A-207ENST00000490696 PCF11O94913 1555 aaKnown RBP24.81■■□□□ 1.56
VPS26A-207ENST00000490696 ABCA9Q8IUA7 1624 aa24.81■■□□□ 1.56
VPS26A-207ENST00000490696 KDM6BO15054 1643 aa24.8■■□□□ 1.56
VPS26A-207ENST00000490696 LRRIQ1Q96JM4 1722 aa24.77■■□□□ 1.56
VPS26A-207ENST00000490696 FYCO1Q9BQS8 1478 aa24.76■■□□□ 1.55
VPS26A-207ENST00000490696 COL17A1Q9UMD9 1497 aaPredicted RBP24.74■■□□□ 1.55
VPS26A-207ENST00000490696 CDK11AQ9UQ88 783 aaPredicted RBP24.72■■□□□ 1.55
VPS26A-207ENST00000490696 CCDC18Q5T9S5 1454 aa24.71■■□□□ 1.55
VPS26A-207ENST00000490696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.55
VPS26A-207ENST00000490696 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
VPS26A-207ENST00000490696 TTC37Q6PGP7 1564 aa24.67■■□□□ 1.54
VPS26A-207ENST00000490696 NEO1Q92859 1461 aa24.63■■□□□ 1.53
VPS26A-207ENST00000490696 PHLDB1Q86UU1 1377 aa24.62■■□□□ 1.53
VPS26A-207ENST00000490696 ARAP3Q8WWN8 1544 aa24.61■■□□□ 1.53
VPS26A-207ENST00000490696 KIF14Q15058 1648 aa24.61■■□□□ 1.53
VPS26A-207ENST00000490696 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.53
VPS26A-207ENST00000490696 PLCH2O75038 1416 aa24.57■■□□□ 1.52
VPS26A-207ENST00000490696 FANCAO15360 1455 aa24.56■■□□□ 1.52
VPS26A-207ENST00000490696 VPS8Q8N3P4 1428 aa24.54■■□□□ 1.52
VPS26A-207ENST00000490696 AKNAQ7Z591 1439 aa24.52■■□□□ 1.52
VPS26A-207ENST00000490696 CFAP74Q9C0B2 1584 aa24.51■■□□□ 1.51
VPS26A-207ENST00000490696 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
VPS26A-207ENST00000490696 MYO5CQ9NQX4 1742 aa24.5■■□□□ 1.51
VPS26A-207ENST00000490696 RAPGEF3O95398 923 aa24.48■■□□□ 1.51
VPS26A-207ENST00000490696 ILDR1Q86SU0 546 aaPredicted RBP24.47■■□□□ 1.51
VPS26A-207ENST00000490696 MTUS2Q5JR59 1369 aa24.45■■□□□ 1.5
VPS26A-207ENST00000490696 EFCAB2Q5VUJ9 269 aa24.45■■□□□ 1.5
VPS26A-207ENST00000490696 FRMPD1Q5SYB0 1578 aa24.45■■□□□ 1.5
VPS26A-207ENST00000490696 DENND4BO75064 1496 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms