RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 IGF1RP08069 1367 aa27.57■■■□□ 2
COL2A1-207ENST00000490609 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
COL2A1-207ENST00000490609 CUL7Q14999 1698 aa27.45■■□□□ 1.98
COL2A1-207ENST00000490609 KIAA0586Q9BVV6 1533 aa27.45■■□□□ 1.98
COL2A1-207ENST00000490609 ADCY10Q96PN6 1610 aa27.43■■□□□ 1.98
COL2A1-207ENST00000490609 ABCC10Q5T3U5 1492 aa27.34■■□□□ 1.97
COL2A1-207ENST00000490609 MAPKBP1O60336 1514 aa27.34■■□□□ 1.97
COL2A1-207ENST00000490609 CARMIL1Q5VZK9 1371 aa27.32■■□□□ 1.96
COL2A1-207ENST00000490609 DIP2BQ9P265 1576 aa27.3■■□□□ 1.96
COL2A1-207ENST00000490609 FAM69CQ0P6D2 419 aa27.27■■□□□ 1.96
COL2A1-207ENST00000490609 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
COL2A1-207ENST00000490609 NPM1P06748 294 aaKnown RBP eCLIP27.22■■□□□ 1.95
COL2A1-207ENST00000490609 PTPRGP23470 1445 aa27.17■■□□□ 1.94
COL2A1-207ENST00000490609 TSPOAP1O95153 1857 aa27.17■■□□□ 1.94
COL2A1-207ENST00000490609 IQGAP2Q13576 1575 aa27.16■■□□□ 1.94
COL2A1-207ENST00000490609 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
COL2A1-207ENST00000490609 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
COL2A1-207ENST00000490609 TTBK1Q5TCY1 1321 aaPredicted RBP27.08■■□□□ 1.93
COL2A1-207ENST00000490609 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
COL2A1-207ENST00000490609 ABCC2Q92887 1545 aa27.07■■□□□ 1.92
COL2A1-207ENST00000490609 UHRF1BP1LA0JNW5 1464 aa27.04■■□□□ 1.92
COL2A1-207ENST00000490609 RAPGEF2Q9Y4G8 1499 aa27.04■■□□□ 1.92
COL2A1-207ENST00000490609 PPRC1Q5VV67 1664 aaKnown RBP27.03■■□□□ 1.92
COL2A1-207ENST00000490609 UGGT2Q9NYU1 1516 aa27.02■■□□□ 1.92
COL2A1-207ENST00000490609 KDM6BO15054 1643 aa27.01■■□□□ 1.92
COL2A1-207ENST00000490609 ASXL2Q76L83 1435 aa26.99■■□□□ 1.91
COL2A1-207ENST00000490609 UACAQ9BZF9 1416 aa26.99■■□□□ 1.91
COL2A1-207ENST00000490609 GLI2P10070 1586 aa26.97■■□□□ 1.91
COL2A1-207ENST00000490609 KIAA0556O60303 1618 aa26.95■■□□□ 1.91
COL2A1-207ENST00000490609 KDM5BQ9UGL1 1544 aa26.94■■□□□ 1.9
COL2A1-207ENST00000490609 PLB1Q6P1J6 1458 aa26.93■■□□□ 1.9
COL2A1-207ENST00000490609 KDM4FA0A1W2PPD8 638 aa26.91■■□□□ 1.9
COL2A1-207ENST00000490609 ZCCHC11Q5TAX3 1644 aaKnown RBP26.9■■□□□ 1.9
COL2A1-207ENST00000490609 CTTNBP2Q8WZ74 1663 aa26.89■■□□□ 1.9
COL2A1-207ENST00000490609 EPRSP07814 1512 aaKnown RBP26.85■■□□□ 1.89
COL2A1-207ENST00000490609 MAP3K4Q9Y6R4 1608 aa26.85■■□□□ 1.89
COL2A1-207ENST00000490609 COL17A1Q9UMD9 1497 aaPredicted RBP26.84■■□□□ 1.89
COL2A1-207ENST00000490609 PRXQ9BXM0 1461 aa26.81■■□□□ 1.88
COL2A1-207ENST00000490609 ABCA8O94911 1581 aa26.75■■□□□ 1.87
COL2A1-207ENST00000490609 WDR7Q9Y4E6 1490 aa26.69■■□□□ 1.86
COL2A1-207ENST00000490609 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
COL2A1-207ENST00000490609 TEX14Q8IWB6 1497 aa26.62■■□□□ 1.85
COL2A1-207ENST00000490609 CFAP43Q8NDM7 1665 aa26.59■■□□□ 1.85
COL2A1-207ENST00000490609 ADGRL1O94910 1474 aa26.58■■□□□ 1.85
COL2A1-207ENST00000490609 MAGI3Q5TCQ9 1506 aa26.55■■□□□ 1.84
COL2A1-207ENST00000490609 KCNH8Q96L42 1107 aa26.55■■□□□ 1.84
COL2A1-207ENST00000490609 CD109Q6YHK3 1445 aa26.54■■□□□ 1.84
COL2A1-207ENST00000490609 SAMD9Q5K651 1589 aa26.53■■□□□ 1.84
COL2A1-207ENST00000490609 ATP10BO94823 1461 aa26.52■■□□□ 1.84
COL2A1-207ENST00000490609 P3H3Q8IVL6 736 aa26.52■■□□□ 1.84
COL2A1-207ENST00000490609 CSRNP3Q8WYN3 585 aa26.52■■□□□ 1.84
COL2A1-207ENST00000490609 ARID3CA6NKF2 412 aa26.45■■□□□ 1.82
COL2A1-207ENST00000490609 RAPGEF6Q8TEU7 1601 aa26.39■■□□□ 1.82
COL2A1-207ENST00000490609 ABCA9Q8IUA7 1624 aa26.39■■□□□ 1.81
COL2A1-207ENST00000490609 ARAP3Q8WWN8 1544 aa26.38■■□□□ 1.81
COL2A1-207ENST00000490609 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
COL2A1-207ENST00000490609 KIF21BO75037 1637 aa26.32■■□□□ 1.8
COL2A1-207ENST00000490609 EEA1Q15075 1411 aa26.31■■□□□ 1.8
COL2A1-207ENST00000490609 FHOD3Q2V2M9 1422 aa26.29■■□□□ 1.8
COL2A1-207ENST00000490609 HECW2Q9P2P5 1572 aa26.26■■□□□ 1.79
COL2A1-207ENST00000490609 RANGAP1P46060 587 aaPredicted RBP26.24■■□□□ 1.79
COL2A1-207ENST00000490609 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
COL2A1-207ENST00000490609 FRMPD1Q5SYB0 1578 aa26.22■■□□□ 1.79
COL2A1-207ENST00000490609 RAPGEF3O95398 923 aa26.21■■□□□ 1.79
COL2A1-207ENST00000490609 PHLDB1Q86UU1 1377 aa26.2■■□□□ 1.79
COL2A1-207ENST00000490609 NEO1Q92859 1461 aa26.19■■□□□ 1.78
COL2A1-207ENST00000490609 ADAMTSL3P82987 1691 aa26.16■■□□□ 1.78
COL2A1-207ENST00000490609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.15■■□□□ 1.78
COL2A1-207ENST00000490609 HNRNPUL2Q1KMD3 747 aaKnown RBP26.15■■□□□ 1.78
COL2A1-207ENST00000490609 EFCAB5A4FU69 1503 aa26.13■■□□□ 1.77
COL2A1-207ENST00000490609 ILDR1Q86SU0 546 aaPredicted RBP26.12■■□□□ 1.77
COL2A1-207ENST00000490609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.11■■□□□ 1.77
COL2A1-207ENST00000490609 RICTORQ6R327 1708 aa26.11■■□□□ 1.77
COL2A1-207ENST00000490609 TTC37Q6PGP7 1564 aa26.08■■□□□ 1.77
COL2A1-207ENST00000490609 PLEKHD1A6NEE1 506 aa26.07■■□□□ 1.76
COL2A1-207ENST00000490609 BCORL1Q5H9F3 1711 aa26.07■■□□□ 1.76
COL2A1-207ENST00000490609 CDK13Q14004 1512 aaKnown RBP26.05■■□□□ 1.76
COL2A1-207ENST00000490609 AKNAQ7Z591 1439 aa26.04■■□□□ 1.76
COL2A1-207ENST00000490609 PTPRMP28827 1452 aa26.04■■□□□ 1.76
COL2A1-207ENST00000490609 SIGLEC1Q9BZZ2 1709 aa26.02■■□□□ 1.76
COL2A1-207ENST00000490609 FANCAO15360 1455 aa26■■□□□ 1.75
COL2A1-207ENST00000490609 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
COL2A1-207ENST00000490609 MADDQ8WXG6 1647 aa25.99■■□□□ 1.75
COL2A1-207ENST00000490609 DENND4BO75064 1496 aaPredicted RBP25.98■■□□□ 1.75
COL2A1-207ENST00000490609 ARHGAP35Q9NRY4 1499 aa25.98■■□□□ 1.75
COL2A1-207ENST00000490609 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
COL2A1-207ENST00000490609 ARHGEF40Q8TER5 1519 aa25.98■■□□□ 1.75
COL2A1-207ENST00000490609 CFAP74Q9C0B2 1584 aa25.95■■□□□ 1.75
COL2A1-207ENST00000490609 LRRIQ1Q96JM4 1722 aa25.95■■□□□ 1.74
COL2A1-207ENST00000490609 ZMYM4Q5VZL5 1548 aa25.93■■□□□ 1.74
COL2A1-207ENST00000490609 UBTFP17480 764 aaKnown RBP25.91■■□□□ 1.74
COL2A1-207ENST00000490609 PLCH2O75038 1416 aa25.9■■□□□ 1.74
COL2A1-207ENST00000490609 YEATS2Q9ULM3 1422 aa25.9■■□□□ 1.74
COL2A1-207ENST00000490609 RIMS1Q86UR5 1692 aaKnown RBP25.89■■□□□ 1.73
COL2A1-207ENST00000490609 HECW1Q76N89 1606 aa25.88■■□□□ 1.73
COL2A1-207ENST00000490609 ARID4BQ4LE39 1312 aaPredicted RBP25.88■■□□□ 1.73
COL2A1-207ENST00000490609 KIF14Q15058 1648 aa25.87■■□□□ 1.73
COL2A1-207ENST00000490609 FMN1Q68DA7 1419 aa25.87■■□□□ 1.73
COL2A1-207ENST00000490609 MYO5CQ9NQX4 1742 aa25.85■■□□□ 1.73
COL2A1-207ENST00000490609 ZFYVE16Q7Z3T8 1539 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms