RNA–Protein interactions for RNA: ENST00000490600.6

MCOLN3-206, Transcript of mucolipin 3, humanhuman

TSL 1 (best)

Gene MCOLN3, Length 2,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCOLN3-206ENST00000490600 CTTNBP2Q8WZ74 1663 aa20.87■□□□□ 0.93
MCOLN3-206ENST00000490600 RRBP1Q9P2E9 1410 aaKnown RBP20.85■□□□□ 0.93
MCOLN3-206ENST00000490600 PCF11O94913 1555 aaKnown RBP20.85■□□□□ 0.93
MCOLN3-206ENST00000490600 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
MCOLN3-206ENST00000490600 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
MCOLN3-206ENST00000490600 LRRC9Q6ZRR7 1453 aa20.78■□□□□ 0.92
MCOLN3-206ENST00000490600 CCNB3Q8WWL7 1395 aa20.77■□□□□ 0.92
MCOLN3-206ENST00000490600 EFCAB5A4FU69 1503 aa20.77■□□□□ 0.91
MCOLN3-206ENST00000490600 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
MCOLN3-206ENST00000490600 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
MCOLN3-206ENST00000490600 CFAP43Q8NDM7 1665 aa20.75■□□□□ 0.91
MCOLN3-206ENST00000490600 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.91
MCOLN3-206ENST00000490600 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
MCOLN3-206ENST00000490600 PBRM1Q86U86 1689 aa20.72■□□□□ 0.91
MCOLN3-206ENST00000490600 ITGAEP38570 1179 aa20.72■□□□□ 0.91
MCOLN3-206ENST00000490600 FYCO1Q9BQS8 1478 aa20.69■□□□□ 0.9
MCOLN3-206ENST00000490600 CASKIN1Q8WXD9 1431 aa20.69■□□□□ 0.9
MCOLN3-206ENST00000490600 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
MCOLN3-206ENST00000490600 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
MCOLN3-206ENST00000490600 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
MCOLN3-206ENST00000490600 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
MCOLN3-206ENST00000490600 LRRIQ1Q96JM4 1722 aa20.64■□□□□ 0.89
MCOLN3-206ENST00000490600 WDR62O43379 1518 aa20.62■□□□□ 0.89
MCOLN3-206ENST00000490600 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
MCOLN3-206ENST00000490600 FMN1Q68DA7 1419 aa20.62■□□□□ 0.89
MCOLN3-206ENST00000490600 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
MCOLN3-206ENST00000490600 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
MCOLN3-206ENST00000490600 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
MCOLN3-206ENST00000490600 FAM50AQ14320 339 aaKnown RBP20.56■□□□□ 0.88
MCOLN3-206ENST00000490600 ZNF316A6NFI3 1004 aaPredicted RBP20.55■□□□□ 0.88
MCOLN3-206ENST00000490600 RAB3GAP2Q9H2M9 1393 aa20.54■□□□□ 0.88
MCOLN3-206ENST00000490600 IQGAP2Q13576 1575 aa20.52■□□□□ 0.88
MCOLN3-206ENST00000490600 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
MCOLN3-206ENST00000490600 EIF4G3O43432 1585 aaKnown RBP20.49■□□□□ 0.87
MCOLN3-206ENST00000490600 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
MCOLN3-206ENST00000490600 CLSPNQ9HAW4 1339 aa20.49■□□□□ 0.87
MCOLN3-206ENST00000490600 MTUS2Q5JR59 1369 aa20.47■□□□□ 0.87
MCOLN3-206ENST00000490600 MAGI3Q5TCQ9 1506 aa20.46■□□□□ 0.87
MCOLN3-206ENST00000490600 SETD5Q9C0A6 1442 aa20.45■□□□□ 0.86
MCOLN3-206ENST00000490600 FGD6Q6ZV73 1430 aa20.44■□□□□ 0.86
MCOLN3-206ENST00000490600 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
MCOLN3-206ENST00000490600 NCOA2Q15596 1464 aa20.41■□□□□ 0.86
MCOLN3-206ENST00000490600 UGGT2Q9NYU1 1516 aa20.39■□□□□ 0.85
MCOLN3-206ENST00000490600 ARID3CA6NKF2 412 aa20.39■□□□□ 0.85
MCOLN3-206ENST00000490600 GRIN2AQ12879 1464 aa20.39■□□□□ 0.85
MCOLN3-206ENST00000490600 CDK13Q14004 1512 aaKnown RBP20.37■□□□□ 0.85
MCOLN3-206ENST00000490600 PTPRKQ15262 1439 aa20.37■□□□□ 0.85
MCOLN3-206ENST00000490600 EHBP1L1Q8N3D4 1523 aa20.37■□□□□ 0.85
MCOLN3-206ENST00000490600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.36■□□□□ 0.85
MCOLN3-206ENST00000490600 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
MCOLN3-206ENST00000490600 DISP1Q96F81 1524 aa20.36■□□□□ 0.85
MCOLN3-206ENST00000490600 HECW1Q76N89 1606 aa20.35■□□□□ 0.85
MCOLN3-206ENST00000490600 KIAA0586Q9BVV6 1533 aa20.35■□□□□ 0.85
MCOLN3-206ENST00000490600 EPRSP07814 1512 aaKnown RBP20.35■□□□□ 0.85
MCOLN3-206ENST00000490600 MYOM3Q5VTT5 1437 aa20.34■□□□□ 0.85
MCOLN3-206ENST00000490600 CCDC18Q5T9S5 1454 aa20.33■□□□□ 0.84
MCOLN3-206ENST00000490600 KIAA0556O60303 1618 aa20.32■□□□□ 0.84
MCOLN3-206ENST00000490600 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
MCOLN3-206ENST00000490600 CEP170Q5SW79 1584 aa20.3■□□□□ 0.84
MCOLN3-206ENST00000490600 MAGI1Q96QZ7 1491 aaPredicted RBP20.29■□□□□ 0.84
MCOLN3-206ENST00000490600 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.84
MCOLN3-206ENST00000490600 PTPN23Q9H3S7 1636 aa20.27■□□□□ 0.84
MCOLN3-206ENST00000490600 FBLN2P98095 1184 aa20.27■□□□□ 0.83
MCOLN3-206ENST00000490600 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
MCOLN3-206ENST00000490600 SYNJ2O15056 1496 aa20.26■□□□□ 0.83
MCOLN3-206ENST00000490600 MIER1Q8N108 512 aa20.26■□□□□ 0.83
MCOLN3-206ENST00000490600 NUP153P49790 1475 aaKnown RBP20.23■□□□□ 0.83
MCOLN3-206ENST00000490600 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
MCOLN3-206ENST00000490600 HFM1A2PYH4 1435 aa20.21■□□□□ 0.83
MCOLN3-206ENST00000490600 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
MCOLN3-206ENST00000490600 NAIPQ13075 1403 aa20.2■□□□□ 0.82
MCOLN3-206ENST00000490600 RAPGEF6Q8TEU7 1601 aa20.19■□□□□ 0.82
MCOLN3-206ENST00000490600 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
MCOLN3-206ENST00000490600 NUP160Q12769 1436 aa20.16■□□□□ 0.82
MCOLN3-206ENST00000490600 CHIC2Q9UKJ5 165 aa20.16■□□□□ 0.82
MCOLN3-206ENST00000490600 PLB1Q6P1J6 1458 aa20.16■□□□□ 0.82
MCOLN3-206ENST00000490600 RRP7BPQ9NSQ0 103 aa20.13■□□□□ 0.81
MCOLN3-206ENST00000490600 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
MCOLN3-206ENST00000490600 JPH4Q96JJ6 628 aa20.12■□□□□ 0.81
MCOLN3-206ENST00000490600 KDM6BO15054 1643 aa20.11■□□□□ 0.81
MCOLN3-206ENST00000490600 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
MCOLN3-206ENST00000490600 YTHDC1Q96MU7 727 aaKnown RBP20.1■□□□□ 0.81
MCOLN3-206ENST00000490600 MIA2Q96PC5 1412 aa20.09■□□□□ 0.81
MCOLN3-206ENST00000490600 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
MCOLN3-206ENST00000490600 ZNF644Q9H582 1327 aaPredicted RBP20.08■□□□□ 0.81
MCOLN3-206ENST00000490600 GCC2Q8IWJ2 1684 aa20.05■□□□□ 0.8
MCOLN3-206ENST00000490600 DENND4BO75064 1496 aaPredicted RBP20.03■□□□□ 0.8
MCOLN3-206ENST00000490600 CARMIL2Q6F5E8 1435 aa20.03■□□□□ 0.8
MCOLN3-206ENST00000490600 KIF14Q15058 1648 aa20.03■□□□□ 0.8
MCOLN3-206ENST00000490600 TROQ12816 1431 aaPredicted RBP20.01■□□□□ 0.79
MCOLN3-206ENST00000490600 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
MCOLN3-206ENST00000490600 DAPK1P53355 1430 aa20■□□□□ 0.79
MCOLN3-206ENST00000490600 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
MCOLN3-206ENST00000490600 ABCC5O15440 1437 aa19.99■□□□□ 0.79
MCOLN3-206ENST00000490600 CDK11AQ9UQ88 783 aaPredicted RBP19.98■□□□□ 0.79
MCOLN3-206ENST00000490600 AKNAQ7Z591 1439 aa19.98■□□□□ 0.79
MCOLN3-206ENST00000490600 DNMT1P26358 1616 aaKnown RBP19.97■□□□□ 0.79
MCOLN3-206ENST00000490600 ABCA8O94911 1581 aa19.97■□□□□ 0.79
MCOLN3-206ENST00000490600 CHD1O14646 1710 aa19.96■□□□□ 0.79
MCOLN3-206ENST00000490600 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms