RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 IGF1RP08069 1367 aa27.47■■□□□ 1.99
NUP58-213ENST00000490231 CUL7Q14999 1698 aa27.39■■□□□ 1.97
NUP58-213ENST00000490231 KIAA0586Q9BVV6 1533 aa27.38■■□□□ 1.97
NUP58-213ENST00000490231 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
NUP58-213ENST00000490231 NPM1P06748 294 aaKnown RBP eCLIP27.25■■□□□ 1.95
NUP58-213ENST00000490231 KIF13AQ9H1H9 1805 aa27.23■■□□□ 1.95
NUP58-213ENST00000490231 MAPKBP1O60336 1514 aa27.22■■□□□ 1.95
NUP58-213ENST00000490231 ABCC10Q5T3U5 1492 aa27.2■■□□□ 1.95
NUP58-213ENST00000490231 ADCY10Q96PN6 1610 aa27.2■■□□□ 1.95
NUP58-213ENST00000490231 FAM69CQ0P6D2 419 aa27.15■■□□□ 1.94
NUP58-213ENST00000490231 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
NUP58-213ENST00000490231 PTPRGP23470 1445 aa27.12■■□□□ 1.93
NUP58-213ENST00000490231 CARMIL2Q6F5E8 1435 aa27.11■■□□□ 1.93
NUP58-213ENST00000490231 DIP2BQ9P265 1576 aa27.1■■□□□ 1.93
NUP58-213ENST00000490231 IQGAP2Q13576 1575 aa27.09■■□□□ 1.93
NUP58-213ENST00000490231 TNIKQ9UKE5 1360 aa27.09■■□□□ 1.93
NUP58-213ENST00000490231 RAPGEF2Q9Y4G8 1499 aa27.03■■□□□ 1.92
NUP58-213ENST00000490231 ABCC2Q92887 1545 aa26.99■■□□□ 1.91
NUP58-213ENST00000490231 TTBK1Q5TCY1 1321 aaPredicted RBP26.98■■□□□ 1.91
NUP58-213ENST00000490231 DISP1Q96F81 1524 aa26.97■■□□□ 1.91
NUP58-213ENST00000490231 UHRF1BP1LA0JNW5 1464 aa26.95■■□□□ 1.91
NUP58-213ENST00000490231 UGGT2Q9NYU1 1516 aa26.94■■□□□ 1.9
NUP58-213ENST00000490231 UACAQ9BZF9 1416 aa26.92■■□□□ 1.9
NUP58-213ENST00000490231 PLB1Q6P1J6 1458 aa26.89■■□□□ 1.9
NUP58-213ENST00000490231 ASXL2Q76L83 1435 aa26.88■■□□□ 1.89
NUP58-213ENST00000490231 KDM6BO15054 1643 aa26.86■■□□□ 1.89
NUP58-213ENST00000490231 KIAA0556O60303 1618 aa26.84■■□□□ 1.89
NUP58-213ENST00000490231 GLI2P10070 1586 aa26.83■■□□□ 1.89
NUP58-213ENST00000490231 KDM5BQ9UGL1 1544 aa26.82■■□□□ 1.88
NUP58-213ENST00000490231 TSPOAP1O95153 1857 aa26.8■■□□□ 1.88
NUP58-213ENST00000490231 PRXQ9BXM0 1461 aa26.75■■□□□ 1.87
NUP58-213ENST00000490231 CTTNBP2Q8WZ74 1663 aa26.74■■□□□ 1.87
NUP58-213ENST00000490231 EPRSP07814 1512 aaKnown RBP26.73■■□□□ 1.87
NUP58-213ENST00000490231 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
NUP58-213ENST00000490231 ZCCHC11Q5TAX3 1644 aaKnown RBP26.71■■□□□ 1.87
NUP58-213ENST00000490231 PPRC1Q5VV67 1664 aaKnown RBP26.7■■□□□ 1.86
NUP58-213ENST00000490231 MAP3K4Q9Y6R4 1608 aa26.65■■□□□ 1.86
NUP58-213ENST00000490231 WDR7Q9Y4E6 1490 aa26.62■■□□□ 1.85
NUP58-213ENST00000490231 TEX14Q8IWB6 1497 aa26.62■■□□□ 1.85
NUP58-213ENST00000490231 KDM4FA0A1W2PPD8 638 aa26.61■■□□□ 1.85
NUP58-213ENST00000490231 ABCA8O94911 1581 aa26.61■■□□□ 1.85
NUP58-213ENST00000490231 COL17A1Q9UMD9 1497 aaPredicted RBP26.56■■□□□ 1.84
NUP58-213ENST00000490231 CSRNP3Q8WYN3 585 aa26.53■■□□□ 1.84
NUP58-213ENST00000490231 FAM9AQ8IZU1 332 aaPredicted RBP26.49■■□□□ 1.83
NUP58-213ENST00000490231 CD109Q6YHK3 1445 aa26.47■■□□□ 1.83
NUP58-213ENST00000490231 MAGI3Q5TCQ9 1506 aa26.46■■□□□ 1.83
NUP58-213ENST00000490231 KCNH8Q96L42 1107 aa26.45■■□□□ 1.82
NUP58-213ENST00000490231 EEA1Q15075 1411 aa26.45■■□□□ 1.82
NUP58-213ENST00000490231 CFAP43Q8NDM7 1665 aa26.44■■□□□ 1.82
NUP58-213ENST00000490231 P3H3Q8IVL6 736 aa26.43■■□□□ 1.82
NUP58-213ENST00000490231 SAMD9Q5K651 1589 aa26.41■■□□□ 1.82
NUP58-213ENST00000490231 ATP10BO94823 1461 aa26.39■■□□□ 1.82
NUP58-213ENST00000490231 ADGRL1O94910 1474 aa26.39■■□□□ 1.82
NUP58-213ENST00000490231 ARID3CA6NKF2 412 aa26.33■■□□□ 1.81
NUP58-213ENST00000490231 RAPGEF6Q8TEU7 1601 aa26.3■■□□□ 1.8
NUP58-213ENST00000490231 ARAP3Q8WWN8 1544 aa26.26■■□□□ 1.79
NUP58-213ENST00000490231 ABCA9Q8IUA7 1624 aa26.25■■□□□ 1.79
NUP58-213ENST00000490231 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
NUP58-213ENST00000490231 NUP153P49790 1475 aaKnown RBP26.23■■□□□ 1.79
NUP58-213ENST00000490231 FHOD3Q2V2M9 1422 aa26.22■■□□□ 1.79
NUP58-213ENST00000490231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.78
NUP58-213ENST00000490231 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.78
NUP58-213ENST00000490231 HNRNPUL2Q1KMD3 747 aaKnown RBP26.2■■□□□ 1.78
NUP58-213ENST00000490231 KIF21BO75037 1637 aa26.2■■□□□ 1.78
NUP58-213ENST00000490231 EFCAB5A4FU69 1503 aa26.16■■□□□ 1.78
NUP58-213ENST00000490231 NEO1Q92859 1461 aa26.15■■□□□ 1.78
NUP58-213ENST00000490231 PLEKHD1A6NEE1 506 aa26.1■■□□□ 1.77
NUP58-213ENST00000490231 RAPGEF3O95398 923 aa26.06■■□□□ 1.76
NUP58-213ENST00000490231 HECW2Q9P2P5 1572 aa26.03■■□□□ 1.76
NUP58-213ENST00000490231 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
NUP58-213ENST00000490231 FRMPD1Q5SYB0 1578 aa25.99■■□□□ 1.75
NUP58-213ENST00000490231 UBTFP17480 764 aaKnown RBP25.99■■□□□ 1.75
NUP58-213ENST00000490231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.98■■□□□ 1.75
NUP58-213ENST00000490231 FANCAO15360 1455 aa25.96■■□□□ 1.75
NUP58-213ENST00000490231 FMN1Q68DA7 1419 aa25.95■■□□□ 1.74
NUP58-213ENST00000490231 AKNAQ7Z591 1439 aa25.95■■□□□ 1.74
NUP58-213ENST00000490231 CDK13Q14004 1512 aaKnown RBP25.94■■□□□ 1.74
NUP58-213ENST00000490231 DENND4BO75064 1496 aaPredicted RBP25.94■■□□□ 1.74
NUP58-213ENST00000490231 CFAP74Q9C0B2 1584 aa25.94■■□□□ 1.74
NUP58-213ENST00000490231 TTC37Q6PGP7 1564 aa25.92■■□□□ 1.74
NUP58-213ENST00000490231 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
NUP58-213ENST00000490231 ARHGAP35Q9NRY4 1499 aa25.91■■□□□ 1.74
NUP58-213ENST00000490231 ADAMTSL3P82987 1691 aa25.91■■□□□ 1.74
NUP58-213ENST00000490231 PTPRMP28827 1452 aa25.88■■□□□ 1.73
NUP58-213ENST00000490231 RICTORQ6R327 1708 aa25.88■■□□□ 1.73
NUP58-213ENST00000490231 HECW1Q76N89 1606 aa25.88■■□□□ 1.73
NUP58-213ENST00000490231 ARHGEF40Q8TER5 1519 aa25.88■■□□□ 1.73
NUP58-213ENST00000490231 ARID4BQ4LE39 1312 aaPredicted RBP25.86■■□□□ 1.73
NUP58-213ENST00000490231 PLCH2O75038 1416 aa25.85■■□□□ 1.73
NUP58-213ENST00000490231 BCORL1Q5H9F3 1711 aa25.85■■□□□ 1.73
NUP58-213ENST00000490231 ZMYM4Q5VZL5 1548 aa25.83■■□□□ 1.73
NUP58-213ENST00000490231 ATP1B4Q9UN42 357 aaPredicted RBP25.83■■□□□ 1.73
NUP58-213ENST00000490231 CDK11AQ9UQ88 783 aaPredicted RBP25.83■■□□□ 1.73
NUP58-213ENST00000490231 ILDR1Q86SU0 546 aaPredicted RBP25.81■■□□□ 1.72
NUP58-213ENST00000490231 MAGI2Q86UL8 1455 aa25.8■■□□□ 1.72
NUP58-213ENST00000490231 MADDQ8WXG6 1647 aa25.77■■□□□ 1.72
NUP58-213ENST00000490231 SCAPERQ9BY12 1400 aa25.77■■□□□ 1.72
NUP58-213ENST00000490231 ZFYVE16Q7Z3T8 1539 aa25.77■■□□□ 1.72
NUP58-213ENST00000490231 POGZQ7Z3K3 1410 aa25.76■■□□□ 1.71
NUP58-213ENST00000490231 YEATS2Q9ULM3 1422 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms