RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 KIAA0586Q9BVV6 1533 aa20.46■□□□□ 0.87
SEMA6C-208ENST00000489944 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
SEMA6C-208ENST00000489944 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
SEMA6C-208ENST00000489944 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
SEMA6C-208ENST00000489944 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
SEMA6C-208ENST00000489944 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
SEMA6C-208ENST00000489944 NPM1P06748 294 aaKnown RBP eCLIP20.26■□□□□ 0.83
SEMA6C-208ENST00000489944 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
SEMA6C-208ENST00000489944 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
SEMA6C-208ENST00000489944 TNIKQ9UKE5 1360 aa20.21■□□□□ 0.83
SEMA6C-208ENST00000489944 PTPRGP23470 1445 aa20.19■□□□□ 0.82
SEMA6C-208ENST00000489944 UGGT2Q9NYU1 1516 aa20.16■□□□□ 0.82
SEMA6C-208ENST00000489944 ADCY10Q96PN6 1610 aa20.15■□□□□ 0.82
SEMA6C-208ENST00000489944 ABCC10Q5T3U5 1492 aa20.14■□□□□ 0.81
SEMA6C-208ENST00000489944 UHRF1BP1LA0JNW5 1464 aa20.11■□□□□ 0.81
SEMA6C-208ENST00000489944 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
SEMA6C-208ENST00000489944 DISP1Q96F81 1524 aa20.1■□□□□ 0.81
SEMA6C-208ENST00000489944 EEA1Q15075 1411 aa20.09■□□□□ 0.81
SEMA6C-208ENST00000489944 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
SEMA6C-208ENST00000489944 GOLGA3Q08378 1498 aa20.08■□□□□ 0.81
SEMA6C-208ENST00000489944 ABCC2Q92887 1545 aa20.07■□□□□ 0.8
SEMA6C-208ENST00000489944 UACAQ9BZF9 1416 aa20.06■□□□□ 0.8
SEMA6C-208ENST00000489944 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
SEMA6C-208ENST00000489944 FAM69CQ0P6D2 419 aa20.04■□□□□ 0.8
SEMA6C-208ENST00000489944 DIP2BQ9P265 1576 aa20.04■□□□□ 0.8
SEMA6C-208ENST00000489944 KIAA0556O60303 1618 aa20.03■□□□□ 0.8
SEMA6C-208ENST00000489944 PLB1Q6P1J6 1458 aa20.03■□□□□ 0.8
SEMA6C-208ENST00000489944 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
SEMA6C-208ENST00000489944 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
SEMA6C-208ENST00000489944 KDM5BQ9UGL1 1544 aa19.98■□□□□ 0.79
SEMA6C-208ENST00000489944 GLI2P10070 1586 aa19.95■□□□□ 0.78
SEMA6C-208ENST00000489944 ASXL2Q76L83 1435 aa19.93■□□□□ 0.78
SEMA6C-208ENST00000489944 TTBK1Q5TCY1 1321 aaPredicted RBP19.9■□□□□ 0.78
SEMA6C-208ENST00000489944 ABCA8O94911 1581 aa19.86■□□□□ 0.77
SEMA6C-208ENST00000489944 ZCCHC11Q5TAX3 1644 aaKnown RBP19.85■□□□□ 0.77
SEMA6C-208ENST00000489944 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.77
SEMA6C-208ENST00000489944 KDM6BO15054 1643 aa19.82■□□□□ 0.76
SEMA6C-208ENST00000489944 TEX14Q8IWB6 1497 aa19.81■□□□□ 0.76
SEMA6C-208ENST00000489944 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
SEMA6C-208ENST00000489944 SAMD9Q5K651 1589 aa19.8■□□□□ 0.76
SEMA6C-208ENST00000489944 KIF21BO75037 1637 aa19.8■□□□□ 0.76
SEMA6C-208ENST00000489944 MAP3K4Q9Y6R4 1608 aa19.77■□□□□ 0.76
SEMA6C-208ENST00000489944 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.76
SEMA6C-208ENST00000489944 TSPOAP1O95153 1857 aa19.76■□□□□ 0.75
SEMA6C-208ENST00000489944 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
SEMA6C-208ENST00000489944 PPRC1Q5VV67 1664 aaKnown RBP19.72■□□□□ 0.75
SEMA6C-208ENST00000489944 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
SEMA6C-208ENST00000489944 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
SEMA6C-208ENST00000489944 CFAP43Q8NDM7 1665 aa19.7■□□□□ 0.74
SEMA6C-208ENST00000489944 RAPGEF6Q8TEU7 1601 aa19.67■□□□□ 0.74
SEMA6C-208ENST00000489944 CD109Q6YHK3 1445 aa19.67■□□□□ 0.74
SEMA6C-208ENST00000489944 ATP10BO94823 1461 aa19.67■□□□□ 0.74
SEMA6C-208ENST00000489944 PHLDB1Q86UU1 1377 aa19.65■□□□□ 0.74
SEMA6C-208ENST00000489944 P3H3Q8IVL6 736 aa19.64■□□□□ 0.73
SEMA6C-208ENST00000489944 KCNH8Q96L42 1107 aa19.59■□□□□ 0.73
SEMA6C-208ENST00000489944 NUP153P49790 1475 aaKnown RBP19.58■□□□□ 0.72
SEMA6C-208ENST00000489944 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.72
SEMA6C-208ENST00000489944 ABCA9Q8IUA7 1624 aa19.58■□□□□ 0.72
SEMA6C-208ENST00000489944 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
SEMA6C-208ENST00000489944 COL17A1Q9UMD9 1497 aaPredicted RBP19.55■□□□□ 0.72
SEMA6C-208ENST00000489944 FMN1Q68DA7 1419 aa19.55■□□□□ 0.72
SEMA6C-208ENST00000489944 ARAP3Q8WWN8 1544 aa19.55■□□□□ 0.72
SEMA6C-208ENST00000489944 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
SEMA6C-208ENST00000489944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.51■□□□□ 0.71
SEMA6C-208ENST00000489944 HNRNPUL2Q1KMD3 747 aaKnown RBP19.51■□□□□ 0.71
SEMA6C-208ENST00000489944 NEO1Q92859 1461 aa19.51■□□□□ 0.71
SEMA6C-208ENST00000489944 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
SEMA6C-208ENST00000489944 KDM4FA0A1W2PPD8 638 aa19.46■□□□□ 0.71
SEMA6C-208ENST00000489944 ARID3CA6NKF2 412 aa19.46■□□□□ 0.71
SEMA6C-208ENST00000489944 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
SEMA6C-208ENST00000489944 ARHGAP35Q9NRY4 1499 aa19.45■□□□□ 0.7
SEMA6C-208ENST00000489944 HECW1Q76N89 1606 aa19.43■□□□□ 0.7
SEMA6C-208ENST00000489944 CFAP74Q9C0B2 1584 aa19.42■□□□□ 0.7
SEMA6C-208ENST00000489944 ADGRL1O94910 1474 aa19.39■□□□□ 0.69
SEMA6C-208ENST00000489944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.36■□□□□ 0.69
SEMA6C-208ENST00000489944 FANCAO15360 1455 aa19.35■□□□□ 0.69
SEMA6C-208ENST00000489944 CDK13Q14004 1512 aaKnown RBP19.33■□□□□ 0.68
SEMA6C-208ENST00000489944 AKNAQ7Z591 1439 aa19.33■□□□□ 0.68
SEMA6C-208ENST00000489944 DENND4BO75064 1496 aaPredicted RBP19.32■□□□□ 0.68
SEMA6C-208ENST00000489944 CCDC18Q5T9S5 1454 aa19.32■□□□□ 0.68
SEMA6C-208ENST00000489944 PLCH2O75038 1416 aa19.32■□□□□ 0.68
SEMA6C-208ENST00000489944 CLIP1P30622 1438 aa19.32■□□□□ 0.68
SEMA6C-208ENST00000489944 CASKIN1Q8WXD9 1431 aa19.31■□□□□ 0.68
SEMA6C-208ENST00000489944 TROQ12816 1431 aaPredicted RBP19.3■□□□□ 0.68
SEMA6C-208ENST00000489944 MAGI2Q86UL8 1455 aa19.28■□□□□ 0.68
SEMA6C-208ENST00000489944 TTC37Q6PGP7 1564 aa19.28■□□□□ 0.68
SEMA6C-208ENST00000489944 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
SEMA6C-208ENST00000489944 KIF14Q15058 1648 aa19.27■□□□□ 0.68
SEMA6C-208ENST00000489944 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
SEMA6C-208ENST00000489944 RAPGEF3O95398 923 aa19.26■□□□□ 0.67
SEMA6C-208ENST00000489944 EFCAB2Q5VUJ9 269 aa19.26■□□□□ 0.67
SEMA6C-208ENST00000489944 FYCO1Q9BQS8 1478 aa19.26■□□□□ 0.67
SEMA6C-208ENST00000489944 FRMPD1Q5SYB0 1578 aa19.26■□□□□ 0.67
SEMA6C-208ENST00000489944 ZMYM4Q5VZL5 1548 aa19.25■□□□□ 0.67
SEMA6C-208ENST00000489944 RICTORQ6R327 1708 aa19.25■□□□□ 0.67
SEMA6C-208ENST00000489944 MYO5CQ9NQX4 1742 aa19.23■□□□□ 0.67
SEMA6C-208ENST00000489944 ARHGEF40Q8TER5 1519 aa19.22■□□□□ 0.67
SEMA6C-208ENST00000489944 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
SEMA6C-208ENST00000489944 POGZQ7Z3K3 1410 aa19.19■□□□□ 0.66
SEMA6C-208ENST00000489944 SCAPERQ9BY12 1400 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms