RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
PLOD3-216ENST00000489927 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
PLOD3-216ENST00000489927 KIF13AQ9H1H9 1805 aa27.9■■■□□ 2.06
PLOD3-216ENST00000489927 KIAA0586Q9BVV6 1533 aa27.87■■■□□ 2.05
PLOD3-216ENST00000489927 CUL7Q14999 1698 aa27.85■■■□□ 2.05
PLOD3-216ENST00000489927 NPM1P06748 294 aaKnown RBP eCLIP27.82■■■□□ 2.04
PLOD3-216ENST00000489927 ADCY10Q96PN6 1610 aa27.8■■■□□ 2.04
PLOD3-216ENST00000489927 MAPKBP1O60336 1514 aa27.78■■■□□ 2.04
PLOD3-216ENST00000489927 ABCC10Q5T3U5 1492 aa27.78■■■□□ 2.04
PLOD3-216ENST00000489927 FAM69CQ0P6D2 419 aa27.77■■■□□ 2.04
PLOD3-216ENST00000489927 CARMIL1Q5VZK9 1371 aa27.73■■■□□ 2.03
PLOD3-216ENST00000489927 DIP2BQ9P265 1576 aa27.71■■■□□ 2.03
PLOD3-216ENST00000489927 PTPRGP23470 1445 aa27.65■■■□□ 2.02
PLOD3-216ENST00000489927 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
PLOD3-216ENST00000489927 CARMIL2Q6F5E8 1435 aa27.59■■■□□ 2.01
PLOD3-216ENST00000489927 IQGAP2Q13576 1575 aa27.58■■■□□ 2.01
PLOD3-216ENST00000489927 TNIKQ9UKE5 1360 aa27.58■■■□□ 2.01
PLOD3-216ENST00000489927 ABCC2Q92887 1545 aa27.52■■■□□ 2
PLOD3-216ENST00000489927 KDM6BO15054 1643 aa27.49■■□□□ 1.99
PLOD3-216ENST00000489927 TSPOAP1O95153 1857 aa27.49■■□□□ 1.99
PLOD3-216ENST00000489927 DISP1Q96F81 1524 aa27.48■■□□□ 1.99
PLOD3-216ENST00000489927 RAPGEF2Q9Y4G8 1499 aa27.47■■□□□ 1.99
PLOD3-216ENST00000489927 ASXL2Q76L83 1435 aa27.45■■□□□ 1.98
PLOD3-216ENST00000489927 UHRF1BP1LA0JNW5 1464 aa27.44■■□□□ 1.98
PLOD3-216ENST00000489927 UACAQ9BZF9 1416 aa27.43■■□□□ 1.98
PLOD3-216ENST00000489927 PLB1Q6P1J6 1458 aa27.41■■□□□ 1.98
PLOD3-216ENST00000489927 UGGT2Q9NYU1 1516 aa27.41■■□□□ 1.98
PLOD3-216ENST00000489927 GLI2P10070 1586 aa27.37■■□□□ 1.97
PLOD3-216ENST00000489927 KIAA0556O60303 1618 aa27.34■■□□□ 1.97
PLOD3-216ENST00000489927 KDM5BQ9UGL1 1544 aa27.33■■□□□ 1.97
PLOD3-216ENST00000489927 PPRC1Q5VV67 1664 aaKnown RBP27.32■■□□□ 1.96
PLOD3-216ENST00000489927 KDM4FA0A1W2PPD8 638 aa27.31■■□□□ 1.96
PLOD3-216ENST00000489927 EPRSP07814 1512 aaKnown RBP27.27■■□□□ 1.96
PLOD3-216ENST00000489927 ZCCHC11Q5TAX3 1644 aaKnown RBP27.27■■□□□ 1.96
PLOD3-216ENST00000489927 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
PLOD3-216ENST00000489927 MAP3K4Q9Y6R4 1608 aa27.22■■□□□ 1.95
PLOD3-216ENST00000489927 COL17A1Q9UMD9 1497 aaPredicted RBP27.18■■□□□ 1.94
PLOD3-216ENST00000489927 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
PLOD3-216ENST00000489927 PRXQ9BXM0 1461 aa27.16■■□□□ 1.94
PLOD3-216ENST00000489927 WDR7Q9Y4E6 1490 aa27.15■■□□□ 1.94
PLOD3-216ENST00000489927 TEX14Q8IWB6 1497 aa27.14■■□□□ 1.94
PLOD3-216ENST00000489927 ABCA8O94911 1581 aa27.1■■□□□ 1.93
PLOD3-216ENST00000489927 ADGRL1O94910 1474 aa27.06■■□□□ 1.92
PLOD3-216ENST00000489927 KCNH8Q96L42 1107 aa27.01■■□□□ 1.91
PLOD3-216ENST00000489927 CD109Q6YHK3 1445 aa27■■□□□ 1.91
PLOD3-216ENST00000489927 MAGI3Q5TCQ9 1506 aa26.98■■□□□ 1.91
PLOD3-216ENST00000489927 CFAP43Q8NDM7 1665 aa26.98■■□□□ 1.91
PLOD3-216ENST00000489927 P3H3Q8IVL6 736 aa26.95■■□□□ 1.9
PLOD3-216ENST00000489927 ARID3CA6NKF2 412 aa26.92■■□□□ 1.9
PLOD3-216ENST00000489927 CSRNP3Q8WYN3 585 aa26.91■■□□□ 1.9
PLOD3-216ENST00000489927 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
PLOD3-216ENST00000489927 ATP10BO94823 1461 aa26.88■■□□□ 1.89
PLOD3-216ENST00000489927 SAMD9Q5K651 1589 aa26.86■■□□□ 1.89
PLOD3-216ENST00000489927 ARAP3Q8WWN8 1544 aa26.78■■□□□ 1.88
PLOD3-216ENST00000489927 RAPGEF6Q8TEU7 1601 aa26.77■■□□□ 1.88
PLOD3-216ENST00000489927 ABCA9Q8IUA7 1624 aa26.76■■□□□ 1.87
PLOD3-216ENST00000489927 EEA1Q15075 1411 aa26.74■■□□□ 1.87
PLOD3-216ENST00000489927 HECW2Q9P2P5 1572 aa26.72■■□□□ 1.87
PLOD3-216ENST00000489927 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
PLOD3-216ENST00000489927 KIF21BO75037 1637 aa26.72■■□□□ 1.87
PLOD3-216ENST00000489927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.71■■□□□ 1.87
PLOD3-216ENST00000489927 HNRNPUL2Q1KMD3 747 aaKnown RBP26.71■■□□□ 1.87
PLOD3-216ENST00000489927 NUP153P49790 1475 aaKnown RBP26.7■■□□□ 1.87
PLOD3-216ENST00000489927 FHOD3Q2V2M9 1422 aa26.69■■□□□ 1.86
PLOD3-216ENST00000489927 PHLDB1Q86UU1 1377 aa26.69■■□□□ 1.86
PLOD3-216ENST00000489927 NEO1Q92859 1461 aa26.64■■□□□ 1.86
PLOD3-216ENST00000489927 RAPGEF3O95398 923 aa26.63■■□□□ 1.85
PLOD3-216ENST00000489927 ILDR1Q86SU0 546 aaPredicted RBP26.61■■□□□ 1.85
PLOD3-216ENST00000489927 FRMPD1Q5SYB0 1578 aa26.56■■□□□ 1.84
PLOD3-216ENST00000489927 EFCAB5A4FU69 1503 aa26.55■■□□□ 1.84
PLOD3-216ENST00000489927 PLEKHD1A6NEE1 506 aa26.55■■□□□ 1.84
PLOD3-216ENST00000489927 ADAMTSL3P82987 1691 aa26.5■■□□□ 1.83
PLOD3-216ENST00000489927 PTPRMP28827 1452 aa26.48■■□□□ 1.83
PLOD3-216ENST00000489927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.83
PLOD3-216ENST00000489927 AKNAQ7Z591 1439 aa26.46■■□□□ 1.83
PLOD3-216ENST00000489927 FANCAO15360 1455 aa26.45■■□□□ 1.82
PLOD3-216ENST00000489927 DENND4BO75064 1496 aaPredicted RBP26.45■■□□□ 1.82
PLOD3-216ENST00000489927 ARID4BQ4LE39 1312 aaPredicted RBP26.44■■□□□ 1.82
PLOD3-216ENST00000489927 TTC37Q6PGP7 1564 aa26.44■■□□□ 1.82
PLOD3-216ENST00000489927 BCORL1Q5H9F3 1711 aa26.43■■□□□ 1.82
PLOD3-216ENST00000489927 CDK13Q14004 1512 aaKnown RBP26.43■■□□□ 1.82
PLOD3-216ENST00000489927 EHMT2Q96KQ7 1210 aa26.42■■□□□ 1.82
PLOD3-216ENST00000489927 RICTORQ6R327 1708 aa26.42■■□□□ 1.82
PLOD3-216ENST00000489927 CFAP74Q9C0B2 1584 aa26.41■■□□□ 1.82
PLOD3-216ENST00000489927 ARHGEF40Q8TER5 1519 aa26.41■■□□□ 1.82
PLOD3-216ENST00000489927 MADDQ8WXG6 1647 aa26.39■■□□□ 1.82
PLOD3-216ENST00000489927 UBTFP17480 764 aaKnown RBP26.38■■□□□ 1.81
PLOD3-216ENST00000489927 ZMYM4Q5VZL5 1548 aa26.34■■□□□ 1.81
PLOD3-216ENST00000489927 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
PLOD3-216ENST00000489927 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
PLOD3-216ENST00000489927 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
PLOD3-216ENST00000489927 PLCH2O75038 1416 aa26.31■■□□□ 1.8
PLOD3-216ENST00000489927 YEATS2Q9ULM3 1422 aa26.31■■□□□ 1.8
PLOD3-216ENST00000489927 HECW1Q76N89 1606 aa26.3■■□□□ 1.8
PLOD3-216ENST00000489927 ZFYVE16Q7Z3T8 1539 aa26.29■■□□□ 1.8
PLOD3-216ENST00000489927 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
PLOD3-216ENST00000489927 RIMS1Q86UR5 1692 aaKnown RBP26.28■■□□□ 1.8
PLOD3-216ENST00000489927 SCAPERQ9BY12 1400 aa26.27■■□□□ 1.8
PLOD3-216ENST00000489927 MAGI2Q86UL8 1455 aa26.27■■□□□ 1.8
PLOD3-216ENST00000489927 SIGLEC1Q9BZZ2 1709 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms