RNA–Protein interactions for RNA: ENST00000489789.3

CNTNAP3B-209, Transcript of contactin associated protein like 3B, humanhuman

TSL 5

Gene CNTNAP3B, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-209ENST00000489789 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
CNTNAP3B-209ENST00000489789 FHAD1B1AJZ9 1412 aa10.37□□□□□ -0.75
CNTNAP3B-209ENST00000489789 CEP170Q5SW79 1584 aa10.36□□□□□ -0.75
CNTNAP3B-209ENST00000489789 KIF27Q86VH2 1401 aa10.36□□□□□ -0.75
CNTNAP3B-209ENST00000489789 ARAP1Q96P48 1450 aa10.35□□□□□ -0.75
CNTNAP3B-209ENST00000489789 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
CNTNAP3B-209ENST00000489789 ERCC6L2Q5T890 1561 aa10.32□□□□□ -0.76
CNTNAP3B-209ENST00000489789 PPP4R3CPQ6ZMV5 832 aa10.32□□□□□ -0.76
CNTNAP3B-209ENST00000489789 TTBK1Q5TCY1 1321 aaPredicted RBP10.32□□□□□ -0.76
CNTNAP3B-209ENST00000489789 IGF1RP08069 1367 aa10.31□□□□□ -0.76
CNTNAP3B-209ENST00000489789 RUSC2Q8N2Y8 1516 aa10.31□□□□□ -0.76
CNTNAP3B-209ENST00000489789 CUL7Q14999 1698 aa10.31□□□□□ -0.76
CNTNAP3B-209ENST00000489789 NUP160Q12769 1436 aa10.3□□□□□ -0.76
CNTNAP3B-209ENST00000489789 JPH4Q96JJ6 628 aa10.28□□□□□ -0.76
CNTNAP3B-209ENST00000489789 CARMIL1Q5VZK9 1371 aa10.27□□□□□ -0.76
CNTNAP3B-209ENST00000489789 PRG4Q92954 1404 aaPredicted RBP10.27□□□□□ -0.77
CNTNAP3B-209ENST00000489789 SCAF1Q9H7N4 1312 aaKnown RBP10.27□□□□□ -0.77
CNTNAP3B-209ENST00000489789 SHROOM2Q13796 1616 aa10.26□□□□□ -0.77
CNTNAP3B-209ENST00000489789 FAM9AQ8IZU1 332 aaPredicted RBP10.25□□□□□ -0.77
CNTNAP3B-209ENST00000489789 KIAA0586Q9BVV6 1533 aa10.21□□□□□ -0.78
CNTNAP3B-209ENST00000489789 EHMT2Q96KQ7 1210 aa10.2□□□□□ -0.78
CNTNAP3B-209ENST00000489789 DMRT2Q9Y5R5 561 aa10.2□□□□□ -0.78
CNTNAP3B-209ENST00000489789 RAPGEF2Q9Y4G8 1499 aa10.19□□□□□ -0.78
CNTNAP3B-209ENST00000489789 NPM1P06748 294 aaKnown RBP eCLIP10.18□□□□□ -0.78
CNTNAP3B-209ENST00000489789 RANGAP1P46060 587 aaPredicted RBP10.18□□□□□ -0.78
CNTNAP3B-209ENST00000489789 CTTNBP2Q8WZ74 1663 aa10.18□□□□□ -0.78
CNTNAP3B-209ENST00000489789 IQGAP2Q13576 1575 aa10.18□□□□□ -0.78
CNTNAP3B-209ENST00000489789 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
CNTNAP3B-209ENST00000489789 CARMIL2Q6F5E8 1435 aa10.15□□□□□ -0.79
CNTNAP3B-209ENST00000489789 PTPRGP23470 1445 aa10.13□□□□□ -0.79
CNTNAP3B-209ENST00000489789 P3H3Q8IVL6 736 aa10.12□□□□□ -0.79
CNTNAP3B-209ENST00000489789 ADCY10Q96PN6 1610 aa10.11□□□□□ -0.79
CNTNAP3B-209ENST00000489789 KIF13AQ9H1H9 1805 aa10.1□□□□□ -0.79
CNTNAP3B-209ENST00000489789 TSPOAP1O95153 1857 aa10.1□□□□□ -0.79
CNTNAP3B-209ENST00000489789 TNIKQ9UKE5 1360 aa10.1□□□□□ -0.79
CNTNAP3B-209ENST00000489789 PRXQ9BXM0 1461 aa10.09□□□□□ -0.79
CNTNAP3B-209ENST00000489789 DISP1Q96F81 1524 aa10.08□□□□□ -0.8
CNTNAP3B-209ENST00000489789 FAM69CQ0P6D2 419 aa10.08□□□□□ -0.8
CNTNAP3B-209ENST00000489789 KIAA0556O60303 1618 aa10.07□□□□□ -0.8
CNTNAP3B-209ENST00000489789 UGGT2Q9NYU1 1516 aa10.07□□□□□ -0.8
CNTNAP3B-209ENST00000489789 ARID3CA6NKF2 412 aa10.06□□□□□ -0.8
CNTNAP3B-209ENST00000489789 UBTFP17480 764 aaKnown RBP10.05□□□□□ -0.8
CNTNAP3B-209ENST00000489789 EEA1Q15075 1411 aa10.04□□□□□ -0.8
CNTNAP3B-209ENST00000489789 UACAQ9BZF9 1416 aa10.04□□□□□ -0.8
CNTNAP3B-209ENST00000489789 GOLGA3Q08378 1498 aa10.04□□□□□ -0.8
CNTNAP3B-209ENST00000489789 CNKSR2Q8WXI2 1034 aa10.03□□□□□ -0.8
CNTNAP3B-209ENST00000489789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.81
CNTNAP3B-209ENST00000489789 HNRNPUL2Q1KMD3 747 aaKnown RBP10.02□□□□□ -0.81
CNTNAP3B-209ENST00000489789 ZCCHC11Q5TAX3 1644 aaKnown RBP10.01□□□□□ -0.81
CNTNAP3B-209ENST00000489789 PLB1Q6P1J6 1458 aa10.01□□□□□ -0.81
CNTNAP3B-209ENST00000489789 MAPKBP1O60336 1514 aa10.01□□□□□ -0.81
CNTNAP3B-209ENST00000489789 ABCC2Q92887 1545 aa10.01□□□□□ -0.81
CNTNAP3B-209ENST00000489789 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
CNTNAP3B-209ENST00000489789 ABCC10Q5T3U5 1492 aa10□□□□□ -0.81
CNTNAP3B-209ENST00000489789 KCNH8Q96L42 1107 aa10□□□□□ -0.81
CNTNAP3B-209ENST00000489789 KIF21BO75037 1637 aa10□□□□□ -0.81
CNTNAP3B-209ENST00000489789 ASXL2Q76L83 1435 aa9.99□□□□□ -0.81
CNTNAP3B-209ENST00000489789 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
CNTNAP3B-209ENST00000489789 UHRF1BP1LA0JNW5 1464 aa9.98□□□□□ -0.81
CNTNAP3B-209ENST00000489789 SAMD9Q5K651 1589 aa9.96□□□□□ -0.82
CNTNAP3B-209ENST00000489789 FHOD3Q2V2M9 1422 aa9.95□□□□□ -0.82
CNTNAP3B-209ENST00000489789 ABCA8O94911 1581 aa9.95□□□□□ -0.82
CNTNAP3B-209ENST00000489789 KDM5BQ9UGL1 1544 aa9.94□□□□□ -0.82
CNTNAP3B-209ENST00000489789 RAPGEF6Q8TEU7 1601 aa9.93□□□□□ -0.82
CNTNAP3B-209ENST00000489789 KDM6BO15054 1643 aa9.93□□□□□ -0.82
CNTNAP3B-209ENST00000489789 NCBP3Q53F19 620 aaKnown RBP9.92□□□□□ -0.82
CNTNAP3B-209ENST00000489789 EPRSP07814 1512 aaKnown RBP9.92□□□□□ -0.82
CNTNAP3B-209ENST00000489789 KCNA4P22459 653 aa9.91□□□□□ -0.82
CNTNAP3B-209ENST00000489789 HOXD11P31277 338 aaPredicted RBP9.9□□□□□ -0.82
CNTNAP3B-209ENST00000489789 WDR7Q9Y4E6 1490 aa9.9□□□□□ -0.83
CNTNAP3B-209ENST00000489789 PPRC1Q5VV67 1664 aaKnown RBP9.9□□□□□ -0.83
CNTNAP3B-209ENST00000489789 GLI2P10070 1586 aa9.89□□□□□ -0.83
CNTNAP3B-209ENST00000489789 ATP10BO94823 1461 aa9.89□□□□□ -0.83
CNTNAP3B-209ENST00000489789 MAP3K4Q9Y6R4 1608 aa9.89□□□□□ -0.83
CNTNAP3B-209ENST00000489789 EFCAB5A4FU69 1503 aa9.88□□□□□ -0.83
CNTNAP3B-209ENST00000489789 RNF216Q9NWF9 866 aaPredicted RBP9.88□□□□□ -0.83
CNTNAP3B-209ENST00000489789 CFAP43Q8NDM7 1665 aa9.87□□□□□ -0.83
CNTNAP3B-209ENST00000489789 PLEKHD1A6NEE1 506 aa9.86□□□□□ -0.83
CNTNAP3B-209ENST00000489789 NPM3O75607 178 aaKnown RBP9.86□□□□□ -0.83
CNTNAP3B-209ENST00000489789 CD109Q6YHK3 1445 aa9.85□□□□□ -0.83
CNTNAP3B-209ENST00000489789 NUP153P49790 1475 aaKnown RBP9.85□□□□□ -0.83
CNTNAP3B-209ENST00000489789 ARHGAP35Q9NRY4 1499 aa9.85□□□□□ -0.83
CNTNAP3B-209ENST00000489789 TEX14Q8IWB6 1497 aa9.84□□□□□ -0.83
CNTNAP3B-209ENST00000489789 DCAF8L1A6NGE4 600 aa9.83□□□□□ -0.84
CNTNAP3B-209ENST00000489789 CDK13Q14004 1512 aaKnown RBP9.82□□□□□ -0.84
CNTNAP3B-209ENST00000489789 LOC105371045A0A1W2PR82 267 aa9.81□□□□□ -0.84
CNTNAP3B-209ENST00000489789 ILDR1Q86SU0 546 aaPredicted RBP9.81□□□□□ -0.84
CNTNAP3B-209ENST00000489789 LRRIQ1Q96JM4 1722 aa9.81□□□□□ -0.84
CNTNAP3B-209ENST00000489789 HECW1Q76N89 1606 aa9.81□□□□□ -0.84
CNTNAP3B-209ENST00000489789 FMN1Q68DA7 1419 aa9.81□□□□□ -0.84
CNTNAP3B-209ENST00000489789 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
CNTNAP3B-209ENST00000489789 ABCA9Q8IUA7 1624 aa9.79□□□□□ -0.84
CNTNAP3B-209ENST00000489789 CLIP1P30622 1438 aa9.78□□□□□ -0.84
CNTNAP3B-209ENST00000489789 MAGI3Q5TCQ9 1506 aa9.77□□□□□ -0.84
CNTNAP3B-209ENST00000489789 CDK11AQ9UQ88 783 aaPredicted RBP9.77□□□□□ -0.85
CNTNAP3B-209ENST00000489789 PCF11O94913 1555 aaKnown RBP9.76□□□□□ -0.85
CNTNAP3B-209ENST00000489789 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
CNTNAP3B-209ENST00000489789 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
CNTNAP3B-209ENST00000489789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.75□□□□□ -0.85
CNTNAP3B-209ENST00000489789 KIF14Q15058 1648 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms