RNA–Protein interactions for RNA: ENST00000489752.1

LNP1-203, Transcript of leukemia NUP98 fusion partner 1, humanhuman

TSL 5 BASIC

Gene LNP1, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-203ENST00000489752 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
LNP1-203ENST00000489752 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
LNP1-203ENST00000489752 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
LNP1-203ENST00000489752 THOC2Q8NI27 1593 aaKnown RBP13.67□□□□□ -0.22
LNP1-203ENST00000489752 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
LNP1-203ENST00000489752 ABCA5Q8WWZ7 1642 aa13.65□□□□□ -0.22
LNP1-203ENST00000489752 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.22
LNP1-203ENST00000489752 MAP3K1Q13233 1512 aa13.63□□□□□ -0.23
LNP1-203ENST00000489752 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
LNP1-203ENST00000489752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
LNP1-203ENST00000489752 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
LNP1-203ENST00000489752 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
LNP1-203ENST00000489752 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
LNP1-203ENST00000489752 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.23
LNP1-203ENST00000489752 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
LNP1-203ENST00000489752 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
LNP1-203ENST00000489752 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
LNP1-203ENST00000489752 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
LNP1-203ENST00000489752 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
LNP1-203ENST00000489752 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
LNP1-203ENST00000489752 CFAP43Q8NDM7 1665 aa13.54□□□□□ -0.24
LNP1-203ENST00000489752 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
LNP1-203ENST00000489752 AQRO60306 1485 aaKnown RBP eCLIP13.52□□□□□ -0.24
LNP1-203ENST00000489752 KANK4Q5T7N3 995 aaPredicted RBP13.51□□□□□ -0.25
LNP1-203ENST00000489752 PCF11O94913 1555 aaKnown RBP13.51□□□□□ -0.25
LNP1-203ENST00000489752 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
LNP1-203ENST00000489752 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
LNP1-203ENST00000489752 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
LNP1-203ENST00000489752 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
LNP1-203ENST00000489752 TDRD9Q8NDG6 1382 aaKnown RBP13.49□□□□□ -0.25
LNP1-203ENST00000489752 WDR62O43379 1518 aa13.49□□□□□ -0.25
LNP1-203ENST00000489752 LRRC9Q6ZRR7 1453 aa13.47□□□□□ -0.25
LNP1-203ENST00000489752 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
LNP1-203ENST00000489752 CASKIN1Q8WXD9 1431 aa13.46□□□□□ -0.25
LNP1-203ENST00000489752 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
LNP1-203ENST00000489752 FHOD3Q2V2M9 1422 aa13.45□□□□□ -0.26
LNP1-203ENST00000489752 FMN1Q68DA7 1419 aa13.45□□□□□ -0.26
LNP1-203ENST00000489752 ADAMTS12P58397 1594 aa13.44□□□□□ -0.26
LNP1-203ENST00000489752 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
LNP1-203ENST00000489752 IFT140Q96RY7 1462 aa13.43□□□□□ -0.26
LNP1-203ENST00000489752 SNAPC4Q5SXM2 1469 aa13.42□□□□□ -0.26
LNP1-203ENST00000489752 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
LNP1-203ENST00000489752 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
LNP1-203ENST00000489752 IQGAP2Q13576 1575 aa13.36□□□□□ -0.27
LNP1-203ENST00000489752 PHLDB1Q86UU1 1377 aa13.35□□□□□ -0.27
LNP1-203ENST00000489752 DHX57Q6P158 1386 aaKnown RBP13.34□□□□□ -0.27
LNP1-203ENST00000489752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.34□□□□□ -0.27
LNP1-203ENST00000489752 LRRIQ1Q96JM4 1722 aa13.34□□□□□ -0.27
LNP1-203ENST00000489752 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
LNP1-203ENST00000489752 EIF4G3O43432 1585 aaKnown RBP13.32□□□□□ -0.28
LNP1-203ENST00000489752 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
LNP1-203ENST00000489752 UGGT2Q9NYU1 1516 aa13.31□□□□□ -0.28
LNP1-203ENST00000489752 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
LNP1-203ENST00000489752 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
LNP1-203ENST00000489752 HECW1Q76N89 1606 aa13.29□□□□□ -0.28
LNP1-203ENST00000489752 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
LNP1-203ENST00000489752 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.29
LNP1-203ENST00000489752 SUPT6HQ7KZ85 1726 aaKnown RBP13.27□□□□□ -0.29
LNP1-203ENST00000489752 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
LNP1-203ENST00000489752 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
LNP1-203ENST00000489752 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
LNP1-203ENST00000489752 ARHGEF11O15085 1522 aa13.25□□□□□ -0.29
LNP1-203ENST00000489752 SETD5Q9C0A6 1442 aa13.25□□□□□ -0.29
LNP1-203ENST00000489752 MTUS2Q5JR59 1369 aa13.24□□□□□ -0.29
LNP1-203ENST00000489752 ZNF316A6NFI3 1004 aaPredicted RBP13.24□□□□□ -0.29
LNP1-203ENST00000489752 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
LNP1-203ENST00000489752 ATP1B4Q9UN42 357 aaPredicted RBP13.24□□□□□ -0.29
LNP1-203ENST00000489752 RAB3GAP2Q9H2M9 1393 aa13.24□□□□□ -0.29
LNP1-203ENST00000489752 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
LNP1-203ENST00000489752 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
LNP1-203ENST00000489752 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
LNP1-203ENST00000489752 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
LNP1-203ENST00000489752 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.29
LNP1-203ENST00000489752 MYOM3Q5VTT5 1437 aa13.21□□□□□ -0.3
LNP1-203ENST00000489752 SYNJ2O15056 1496 aa13.21□□□□□ -0.3
LNP1-203ENST00000489752 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
LNP1-203ENST00000489752 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
LNP1-203ENST00000489752 MAPKBP1O60336 1514 aa13.19□□□□□ -0.3
LNP1-203ENST00000489752 MAGI3Q5TCQ9 1506 aa13.19□□□□□ -0.3
LNP1-203ENST00000489752 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
LNP1-203ENST00000489752 ITGAEP38570 1179 aa13.18□□□□□ -0.3
LNP1-203ENST00000489752 CEP170Q5SW79 1584 aa13.16□□□□□ -0.3
LNP1-203ENST00000489752 PTPN23Q9H3S7 1636 aa13.16□□□□□ -0.3
LNP1-203ENST00000489752 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
LNP1-203ENST00000489752 TCOF1Q13428 1488 aaKnown RBP13.15□□□□□ -0.3
LNP1-203ENST00000489752 NUP160Q12769 1436 aa13.15□□□□□ -0.31
LNP1-203ENST00000489752 RAPGEF6Q8TEU7 1601 aa13.14□□□□□ -0.31
LNP1-203ENST00000489752 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
LNP1-203ENST00000489752 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
LNP1-203ENST00000489752 MYT1Q01538 1121 aa13.13□□□□□ -0.31
LNP1-203ENST00000489752 CDK13Q14004 1512 aaKnown RBP13.12□□□□□ -0.31
LNP1-203ENST00000489752 MIA2Q96PC5 1412 aa13.12□□□□□ -0.31
LNP1-203ENST00000489752 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
LNP1-203ENST00000489752 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
LNP1-203ENST00000489752 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
LNP1-203ENST00000489752 AKNAQ7Z591 1439 aa13.1□□□□□ -0.31
LNP1-203ENST00000489752 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
LNP1-203ENST00000489752 CHMP7Q8WUX9 453 aaPredicted RBP13.09□□□□□ -0.31
LNP1-203ENST00000489752 NAIPQ13075 1403 aa13.06□□□□□ -0.32
LNP1-203ENST00000489752 CARMIL2Q6F5E8 1435 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms