RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 TTBK1Q5TCY1 1321 aaPredicted RBP19.9■□□□□ 0.78
GGPS1-207ENST00000489692 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
GGPS1-207ENST00000489692 CUL7Q14999 1698 aa19.88■□□□□ 0.77
GGPS1-207ENST00000489692 KIAA0586Q9BVV6 1533 aa19.88■□□□□ 0.77
GGPS1-207ENST00000489692 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
GGPS1-207ENST00000489692 NPM1P06748 294 aaKnown RBP eCLIP19.87■□□□□ 0.77
GGPS1-207ENST00000489692 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
GGPS1-207ENST00000489692 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
GGPS1-207ENST00000489692 PTPRGP23470 1445 aa19.75■□□□□ 0.75
GGPS1-207ENST00000489692 FAM69CQ0P6D2 419 aa19.71■□□□□ 0.75
GGPS1-207ENST00000489692 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
GGPS1-207ENST00000489692 IQGAP2Q13576 1575 aa19.68■□□□□ 0.74
GGPS1-207ENST00000489692 ADCY10Q96PN6 1610 aa19.62■□□□□ 0.73
GGPS1-207ENST00000489692 ABCC10Q5T3U5 1492 aa19.59■□□□□ 0.73
GGPS1-207ENST00000489692 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
GGPS1-207ENST00000489692 MAPKBP1O60336 1514 aa19.57■□□□□ 0.72
GGPS1-207ENST00000489692 DISP1Q96F81 1524 aa19.57■□□□□ 0.72
GGPS1-207ENST00000489692 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
GGPS1-207ENST00000489692 UACAQ9BZF9 1416 aa19.57■□□□□ 0.72
GGPS1-207ENST00000489692 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
GGPS1-207ENST00000489692 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
GGPS1-207ENST00000489692 ABCC2Q92887 1545 aa19.53■□□□□ 0.72
GGPS1-207ENST00000489692 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
GGPS1-207ENST00000489692 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
GGPS1-207ENST00000489692 RANGAP1P46060 587 aaPredicted RBP19.5■□□□□ 0.71
GGPS1-207ENST00000489692 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
GGPS1-207ENST00000489692 ASXL2Q76L83 1435 aa19.49■□□□□ 0.71
GGPS1-207ENST00000489692 UHRF1BP1LA0JNW5 1464 aa19.48■□□□□ 0.71
GGPS1-207ENST00000489692 KIAA0556O60303 1618 aa19.48■□□□□ 0.71
GGPS1-207ENST00000489692 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
GGPS1-207ENST00000489692 PLB1Q6P1J6 1458 aa19.47■□□□□ 0.71
GGPS1-207ENST00000489692 EEA1Q15075 1411 aa19.45■□□□□ 0.7
GGPS1-207ENST00000489692 KIF13AQ9H1H9 1805 aa19.44■□□□□ 0.7
GGPS1-207ENST00000489692 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
GGPS1-207ENST00000489692 ARID3CA6NKF2 412 aa19.42■□□□□ 0.7
GGPS1-207ENST00000489692 CTTNBP2Q8WZ74 1663 aa19.4■□□□□ 0.7
GGPS1-207ENST00000489692 KDM5BQ9UGL1 1544 aa19.39■□□□□ 0.69
GGPS1-207ENST00000489692 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
GGPS1-207ENST00000489692 KCNH8Q96L42 1107 aa19.38■□□□□ 0.69
GGPS1-207ENST00000489692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
GGPS1-207ENST00000489692 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
GGPS1-207ENST00000489692 EPRSP07814 1512 aaKnown RBP19.33■□□□□ 0.68
GGPS1-207ENST00000489692 KDM6BO15054 1643 aa19.32■□□□□ 0.68
GGPS1-207ENST00000489692 WDR7Q9Y4E6 1490 aa19.31■□□□□ 0.68
GGPS1-207ENST00000489692 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
GGPS1-207ENST00000489692 ZCCHC11Q5TAX3 1644 aaKnown RBP19.31■□□□□ 0.68
GGPS1-207ENST00000489692 TSPOAP1O95153 1857 aa19.31■□□□□ 0.68
GGPS1-207ENST00000489692 ABCA8O94911 1581 aa19.28■□□□□ 0.68
GGPS1-207ENST00000489692 GLI2P10070 1586 aa19.28■□□□□ 0.68
GGPS1-207ENST00000489692 TEX14Q8IWB6 1497 aa19.24■□□□□ 0.67
GGPS1-207ENST00000489692 FHOD3Q2V2M9 1422 aa19.24■□□□□ 0.67
GGPS1-207ENST00000489692 CD109Q6YHK3 1445 aa19.22■□□□□ 0.67
GGPS1-207ENST00000489692 ATP10BO94823 1461 aa19.2■□□□□ 0.66
GGPS1-207ENST00000489692 SAMD9Q5K651 1589 aa19.19■□□□□ 0.66
GGPS1-207ENST00000489692 ATP1B4Q9UN42 357 aaPredicted RBP19.18■□□□□ 0.66
GGPS1-207ENST00000489692 KIF21BO75037 1637 aa19.18■□□□□ 0.66
GGPS1-207ENST00000489692 MAP3K4Q9Y6R4 1608 aa19.15■□□□□ 0.66
GGPS1-207ENST00000489692 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
GGPS1-207ENST00000489692 COL17A1Q9UMD9 1497 aaPredicted RBP19.13■□□□□ 0.65
GGPS1-207ENST00000489692 RAPGEF6Q8TEU7 1601 aa19.13■□□□□ 0.65
GGPS1-207ENST00000489692 PPRC1Q5VV67 1664 aaKnown RBP19.13■□□□□ 0.65
GGPS1-207ENST00000489692 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
GGPS1-207ENST00000489692 MAGI3Q5TCQ9 1506 aa19.1■□□□□ 0.65
GGPS1-207ENST00000489692 KDM4FA0A1W2PPD8 638 aa19.1■□□□□ 0.65
GGPS1-207ENST00000489692 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
GGPS1-207ENST00000489692 CFAP43Q8NDM7 1665 aa19.05■□□□□ 0.64
GGPS1-207ENST00000489692 FMN1Q68DA7 1419 aa19.02■□□□□ 0.64
GGPS1-207ENST00000489692 ARHGAP35Q9NRY4 1499 aa18.99■□□□□ 0.63
GGPS1-207ENST00000489692 RAPGEF3O95398 923 aa18.99■□□□□ 0.63
GGPS1-207ENST00000489692 CDK11AQ9UQ88 783 aaPredicted RBP18.99■□□□□ 0.63
GGPS1-207ENST00000489692 ADGRL1O94910 1474 aa18.98■□□□□ 0.63
GGPS1-207ENST00000489692 PHLDB1Q86UU1 1377 aa18.98■□□□□ 0.63
GGPS1-207ENST00000489692 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.63
GGPS1-207ENST00000489692 ABCA9Q8IUA7 1624 aa18.96■□□□□ 0.63
GGPS1-207ENST00000489692 ARAP3Q8WWN8 1544 aa18.94■□□□□ 0.62
GGPS1-207ENST00000489692 NEO1Q92859 1461 aa18.93■□□□□ 0.62
GGPS1-207ENST00000489692 ARID4BQ4LE39 1312 aaPredicted RBP18.91■□□□□ 0.62
GGPS1-207ENST00000489692 HECW1Q76N89 1606 aa18.89■□□□□ 0.62
GGPS1-207ENST00000489692 AKNAQ7Z591 1439 aa18.88■□□□□ 0.61
GGPS1-207ENST00000489692 FANCAO15360 1455 aa18.88■□□□□ 0.61
GGPS1-207ENST00000489692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.87■□□□□ 0.61
GGPS1-207ENST00000489692 DENND4BO75064 1496 aaPredicted RBP18.86■□□□□ 0.61
GGPS1-207ENST00000489692 CLIP1P30622 1438 aa18.85■□□□□ 0.61
GGPS1-207ENST00000489692 EFCAB2Q5VUJ9 269 aa18.84■□□□□ 0.61
GGPS1-207ENST00000489692 TTC37Q6PGP7 1564 aa18.82■□□□□ 0.6
GGPS1-207ENST00000489692 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
GGPS1-207ENST00000489692 PLCH2O75038 1416 aa18.81■□□□□ 0.6
GGPS1-207ENST00000489692 MYT1LQ9UL68 1186 aa18.8■□□□□ 0.6
GGPS1-207ENST00000489692 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
GGPS1-207ENST00000489692 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
GGPS1-207ENST00000489692 CFAP74Q9C0B2 1584 aa18.76■□□□□ 0.59
GGPS1-207ENST00000489692 CCDC18Q5T9S5 1454 aa18.76■□□□□ 0.59
GGPS1-207ENST00000489692 KIF14Q15058 1648 aa18.75■□□□□ 0.59
GGPS1-207ENST00000489692 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
GGPS1-207ENST00000489692 FRMPD1Q5SYB0 1578 aa18.73■□□□□ 0.59
GGPS1-207ENST00000489692 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
GGPS1-207ENST00000489692 ARHGAP5Q13017 1502 aa18.73■□□□□ 0.59
GGPS1-207ENST00000489692 MLECQ14165 292 aa18.72■□□□□ 0.59
GGPS1-207ENST00000489692 FYCO1Q9BQS8 1478 aa18.71■□□□□ 0.59
GGPS1-207ENST00000489692 POGZQ7Z3K3 1410 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms