RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 RIMBP3Q9UFD9 1639 aa13.2□□□□□ -0.3
SSR1-210ENST00000489567 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
SSR1-210ENST00000489567 FAM9AQ8IZU1 332 aaPredicted RBP13.17□□□□□ -0.3
SSR1-210ENST00000489567 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
SSR1-210ENST00000489567 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
SSR1-210ENST00000489567 FOXD1Q16676 465 aa13.15□□□□□ -0.3
SSR1-210ENST00000489567 EEA1Q15075 1411 aa13.14□□□□□ -0.31
SSR1-210ENST00000489567 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
SSR1-210ENST00000489567 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
SSR1-210ENST00000489567 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
SSR1-210ENST00000489567 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
SSR1-210ENST00000489567 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
SSR1-210ENST00000489567 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
SSR1-210ENST00000489567 PRG4Q92954 1404 aaPredicted RBP13.09□□□□□ -0.31
SSR1-210ENST00000489567 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
SSR1-210ENST00000489567 KIF21BO75037 1637 aa13.02□□□□□ -0.32
SSR1-210ENST00000489567 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.32
SSR1-210ENST00000489567 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.32
SSR1-210ENST00000489567 UGGT2Q9NYU1 1516 aa13□□□□□ -0.33
SSR1-210ENST00000489567 DISP1Q96F81 1524 aa13□□□□□ -0.33
SSR1-210ENST00000489567 CARMIL2Q6F5E8 1435 aa12.97□□□□□ -0.33
SSR1-210ENST00000489567 TTBK1Q5TCY1 1321 aaPredicted RBP12.95□□□□□ -0.34
SSR1-210ENST00000489567 GOLGA3Q08378 1498 aa12.95□□□□□ -0.34
SSR1-210ENST00000489567 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
SSR1-210ENST00000489567 TNIKQ9UKE5 1360 aa12.94□□□□□ -0.34
SSR1-210ENST00000489567 PTPRGP23470 1445 aa12.93□□□□□ -0.34
SSR1-210ENST00000489567 UBTFP17480 764 aaKnown RBP12.93□□□□□ -0.34
SSR1-210ENST00000489567 RANGAP1P46060 587 aaPredicted RBP12.92□□□□□ -0.34
SSR1-210ENST00000489567 P3H3Q8IVL6 736 aa12.9□□□□□ -0.34
SSR1-210ENST00000489567 SAMD9Q5K651 1589 aa12.89□□□□□ -0.35
SSR1-210ENST00000489567 ADCY10Q96PN6 1610 aa12.89□□□□□ -0.35
SSR1-210ENST00000489567 UACAQ9BZF9 1416 aa12.84□□□□□ -0.35
SSR1-210ENST00000489567 PLB1Q6P1J6 1458 aa12.84□□□□□ -0.35
SSR1-210ENST00000489567 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
SSR1-210ENST00000489567 ABCC2Q92887 1545 aa12.82□□□□□ -0.36
SSR1-210ENST00000489567 UHRF1BP1LA0JNW5 1464 aa12.82□□□□□ -0.36
SSR1-210ENST00000489567 ARHGAP35Q9NRY4 1499 aa12.81□□□□□ -0.36
SSR1-210ENST00000489567 LOC105371045A0A1W2PR82 267 aa12.81□□□□□ -0.36
SSR1-210ENST00000489567 EFCAB5A4FU69 1503 aa12.81□□□□□ -0.36
SSR1-210ENST00000489567 PLPPR3Q6T4P5 718 aa12.8□□□□□ -0.36
SSR1-210ENST00000489567 ABCA8O94911 1581 aa12.8□□□□□ -0.36
SSR1-210ENST00000489567 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
SSR1-210ENST00000489567 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
SSR1-210ENST00000489567 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.36
SSR1-210ENST00000489567 MAPKBP1O60336 1514 aa12.76□□□□□ -0.37
SSR1-210ENST00000489567 ARID3CA6NKF2 412 aa12.75□□□□□ -0.37
SSR1-210ENST00000489567 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
SSR1-210ENST00000489567 RAPGEF6Q8TEU7 1601 aa12.74□□□□□ -0.37
SSR1-210ENST00000489567 CLIP1P30622 1438 aa12.73□□□□□ -0.37
SSR1-210ENST00000489567 ASXL2Q76L83 1435 aa12.73□□□□□ -0.37
SSR1-210ENST00000489567 NUP153P49790 1475 aaKnown RBP12.73□□□□□ -0.37
SSR1-210ENST00000489567 ATP10BO94823 1461 aa12.71□□□□□ -0.37
SSR1-210ENST00000489567 ABCC10Q5T3U5 1492 aa12.71□□□□□ -0.38
SSR1-210ENST00000489567 CEP162Q5TB80 1403 aa12.7□□□□□ -0.38
SSR1-210ENST00000489567 FMN1Q68DA7 1419 aa12.7□□□□□ -0.38
SSR1-210ENST00000489567 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
SSR1-210ENST00000489567 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
SSR1-210ENST00000489567 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
SSR1-210ENST00000489567 WDR7Q9Y4E6 1490 aa12.67□□□□□ -0.38
SSR1-210ENST00000489567 EPRSP07814 1512 aaKnown RBP12.66□□□□□ -0.38
SSR1-210ENST00000489567 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
SSR1-210ENST00000489567 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
SSR1-210ENST00000489567 PCF11O94913 1555 aaKnown RBP12.64□□□□□ -0.39
SSR1-210ENST00000489567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
SSR1-210ENST00000489567 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
SSR1-210ENST00000489567 HECW1Q76N89 1606 aa12.63□□□□□ -0.39
SSR1-210ENST00000489567 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
SSR1-210ENST00000489567 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
SSR1-210ENST00000489567 GLI2P10070 1586 aa12.62□□□□□ -0.39
SSR1-210ENST00000489567 LRRIQ1Q96JM4 1722 aa12.62□□□□□ -0.39
SSR1-210ENST00000489567 FYCO1Q9BQS8 1478 aa12.58□□□□□ -0.39
SSR1-210ENST00000489567 PLEKHD1A6NEE1 506 aa12.58□□□□□ -0.4
SSR1-210ENST00000489567 TSPOAP1O95153 1857 aa12.58□□□□□ -0.4
SSR1-210ENST00000489567 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
SSR1-210ENST00000489567 PPRC1Q5VV67 1664 aaKnown RBP12.57□□□□□ -0.4
SSR1-210ENST00000489567 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
SSR1-210ENST00000489567 CCDC18Q5T9S5 1454 aa12.54□□□□□ -0.4
SSR1-210ENST00000489567 MAGI3Q5TCQ9 1506 aa12.54□□□□□ -0.4
SSR1-210ENST00000489567 VPS8Q8N3P4 1428 aa12.53□□□□□ -0.4
SSR1-210ENST00000489567 ABCA9Q8IUA7 1624 aa12.53□□□□□ -0.4
SSR1-210ENST00000489567 CFAP43Q8NDM7 1665 aa12.53□□□□□ -0.4
SSR1-210ENST00000489567 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.418e-6■□□□□ 10.5
SSR1-210ENST00000489567 TROQ12816 1431 aaPredicted RBP12.52□□□□□ -0.41
SSR1-210ENST00000489567 CDK11AQ9UQ88 783 aaPredicted RBP12.51□□□□□ -0.41
SSR1-210ENST00000489567 TTC37Q6PGP7 1564 aa12.51□□□□□ -0.41
SSR1-210ENST00000489567 KIF14Q15058 1648 aa12.51□□□□□ -0.41
SSR1-210ENST00000489567 TEX14Q8IWB6 1497 aa12.48□□□□□ -0.41
SSR1-210ENST00000489567 COL17A1Q9UMD9 1497 aaPredicted RBP12.48□□□□□ -0.41
SSR1-210ENST00000489567 KDM6BO15054 1643 aa12.46□□□□□ -0.42
SSR1-210ENST00000489567 TIAM1Q13009 1591 aa12.44□□□□□ -0.42
SSR1-210ENST00000489567 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
SSR1-210ENST00000489567 ADRA2BP18089 450 aa12.43□□□□□ -0.42
SSR1-210ENST00000489567 PLCH2O75038 1416 aa12.43□□□□□ -0.42
SSR1-210ENST00000489567 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
SSR1-210ENST00000489567 FANCAO15360 1455 aa12.42□□□□□ -0.42
SSR1-210ENST00000489567 KANK4Q5T7N3 995 aaPredicted RBP12.42□□□□□ -0.42
SSR1-210ENST00000489567 NEO1Q92859 1461 aa12.41□□□□□ -0.42
SSR1-210ENST00000489567 EHBP1L1Q8N3D4 1523 aa12.41□□□□□ -0.42
SSR1-210ENST00000489567 MYO5CQ9NQX4 1742 aa12.4□□□□□ -0.42
SSR1-210ENST00000489567 ARAP3Q8WWN8 1544 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms