RNA–Protein interactions for RNA: ENST00000489555.1

PRUNE2-213, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 635 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-213ENST00000489555 RUSC2Q8N2Y8 1516 aa13.63□□□□□ -0.23
PRUNE2-213ENST00000489555 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
PRUNE2-213ENST00000489555 KDM6BO15054 1643 aa13.61□□□□□ -0.23
PRUNE2-213ENST00000489555 ADCY10Q96PN6 1610 aa13.59□□□□□ -0.23
PRUNE2-213ENST00000489555 JPH4Q96JJ6 628 aa13.57□□□□□ -0.24
PRUNE2-213ENST00000489555 FAM69CQ0P6D2 419 aa13.56□□□□□ -0.24
PRUNE2-213ENST00000489555 TSPOAP1O95153 1857 aa13.56□□□□□ -0.24
PRUNE2-213ENST00000489555 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
PRUNE2-213ENST00000489555 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
PRUNE2-213ENST00000489555 CUL7Q14999 1698 aa13.49□□□□□ -0.25
PRUNE2-213ENST00000489555 KIAA0586Q9BVV6 1533 aa13.49□□□□□ -0.25
PRUNE2-213ENST00000489555 GLI2P10070 1586 aa13.46□□□□□ -0.25
PRUNE2-213ENST00000489555 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
PRUNE2-213ENST00000489555 ILDR1Q86SU0 546 aaPredicted RBP13.42□□□□□ -0.26
PRUNE2-213ENST00000489555 ABCC2Q92887 1545 aa13.41□□□□□ -0.26
PRUNE2-213ENST00000489555 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
PRUNE2-213ENST00000489555 UHRF1BP1LA0JNW5 1464 aa13.38□□□□□ -0.27
PRUNE2-213ENST00000489555 ADGRL1O94910 1474 aa13.38□□□□□ -0.27
PRUNE2-213ENST00000489555 PTPRGP23470 1445 aa13.38□□□□□ -0.27
PRUNE2-213ENST00000489555 MAP3K4Q9Y6R4 1608 aa13.37□□□□□ -0.27
PRUNE2-213ENST00000489555 CARMIL2Q6F5E8 1435 aa13.36□□□□□ -0.27
PRUNE2-213ENST00000489555 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
PRUNE2-213ENST00000489555 IGF1RP08069 1367 aa13.35□□□□□ -0.27
PRUNE2-213ENST00000489555 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
PRUNE2-213ENST00000489555 ASXL2Q76L83 1435 aa13.35□□□□□ -0.27
PRUNE2-213ENST00000489555 TEX14Q8IWB6 1497 aa13.34□□□□□ -0.27
PRUNE2-213ENST00000489555 IQGAP2Q13576 1575 aa13.33□□□□□ -0.28
PRUNE2-213ENST00000489555 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.28
PRUNE2-213ENST00000489555 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
PRUNE2-213ENST00000489555 KDM5BQ9UGL1 1544 aa13.3□□□□□ -0.28
PRUNE2-213ENST00000489555 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
PRUNE2-213ENST00000489555 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
PRUNE2-213ENST00000489555 ZCCHC11Q5TAX3 1644 aaKnown RBP13.28□□□□□ -0.28
PRUNE2-213ENST00000489555 COL17A1Q9UMD9 1497 aaPredicted RBP13.27□□□□□ -0.29
PRUNE2-213ENST00000489555 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
PRUNE2-213ENST00000489555 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
PRUNE2-213ENST00000489555 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
PRUNE2-213ENST00000489555 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
PRUNE2-213ENST00000489555 KIAA0556O60303 1618 aa13.21□□□□□ -0.29
PRUNE2-213ENST00000489555 MAGI3Q5TCQ9 1506 aa13.2□□□□□ -0.3
PRUNE2-213ENST00000489555 WDR7Q9Y4E6 1490 aa13.2□□□□□ -0.3
PRUNE2-213ENST00000489555 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
PRUNE2-213ENST00000489555 CTTNBP2Q8WZ74 1663 aa13.16□□□□□ -0.3
PRUNE2-213ENST00000489555 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
PRUNE2-213ENST00000489555 KIF21BO75037 1637 aa13.14□□□□□ -0.31
PRUNE2-213ENST00000489555 RAPGEF2Q9Y4G8 1499 aa13.14□□□□□ -0.31
PRUNE2-213ENST00000489555 FBXO41Q8TF61 875 aa13.12□□□□□ -0.31
PRUNE2-213ENST00000489555 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
PRUNE2-213ENST00000489555 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
PRUNE2-213ENST00000489555 ABCA8O94911 1581 aa13.11□□□□□ -0.31
PRUNE2-213ENST00000489555 GOLGA3Q08378 1498 aa13.1□□□□□ -0.31
PRUNE2-213ENST00000489555 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
PRUNE2-213ENST00000489555 PHLDB1Q86UU1 1377 aa13.07□□□□□ -0.32
PRUNE2-213ENST00000489555 ABCA9Q8IUA7 1624 aa13.05□□□□□ -0.32
PRUNE2-213ENST00000489555 PTPRMP28827 1452 aa13.04□□□□□ -0.32
PRUNE2-213ENST00000489555 BCORL1Q5H9F3 1711 aa13.03□□□□□ -0.32
PRUNE2-213ENST00000489555 PCF11O94913 1555 aaKnown RBP13.02□□□□□ -0.33
PRUNE2-213ENST00000489555 NEO1Q92859 1461 aa12.99□□□□□ -0.33
PRUNE2-213ENST00000489555 MADDQ8WXG6 1647 aa12.98□□□□□ -0.33
PRUNE2-213ENST00000489555 KCNH8Q96L42 1107 aa12.97□□□□□ -0.33
PRUNE2-213ENST00000489555 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
PRUNE2-213ENST00000489555 FRMPD1Q5SYB0 1578 aa12.96□□□□□ -0.33
PRUNE2-213ENST00000489555 ARHGEF40Q8TER5 1519 aa12.94□□□□□ -0.34
PRUNE2-213ENST00000489555 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
PRUNE2-213ENST00000489555 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
PRUNE2-213ENST00000489555 ATP10BO94823 1461 aa12.93□□□□□ -0.34
PRUNE2-213ENST00000489555 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
PRUNE2-213ENST00000489555 PRXQ9BXM0 1461 aa12.92□□□□□ -0.34
PRUNE2-213ENST00000489555 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
PRUNE2-213ENST00000489555 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
PRUNE2-213ENST00000489555 RAPGEF6Q8TEU7 1601 aa12.91□□□□□ -0.34
PRUNE2-213ENST00000489555 ZMYM4Q5VZL5 1548 aa12.88□□□□□ -0.35
PRUNE2-213ENST00000489555 FANCAO15360 1455 aa12.86□□□□□ -0.35
PRUNE2-213ENST00000489555 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
PRUNE2-213ENST00000489555 FER1L4A9Z1Z3 1794 aa12.86□□□□□ -0.35
PRUNE2-213ENST00000489555 FHOD3Q2V2M9 1422 aa12.86□□□□□ -0.35
PRUNE2-213ENST00000489555 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
PRUNE2-213ENST00000489555 EFCAB5A4FU69 1503 aa12.85□□□□□ -0.35
PRUNE2-213ENST00000489555 TTC37Q6PGP7 1564 aa12.85□□□□□ -0.35
PRUNE2-213ENST00000489555 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
PRUNE2-213ENST00000489555 ARID4BQ4LE39 1312 aaPredicted RBP12.84□□□□□ -0.35
PRUNE2-213ENST00000489555 MAGI2Q86UL8 1455 aa12.84□□□□□ -0.35
PRUNE2-213ENST00000489555 SETD1BQ9UPS6 1966 aaKnown RBP12.83□□□□□ -0.35
PRUNE2-213ENST00000489555 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.36
PRUNE2-213ENST00000489555 AKNAQ7Z591 1439 aa12.82□□□□□ -0.36
PRUNE2-213ENST00000489555 ZFYVE16Q7Z3T8 1539 aa12.82□□□□□ -0.36
PRUNE2-213ENST00000489555 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
PRUNE2-213ENST00000489555 SIGLEC1Q9BZZ2 1709 aa12.81□□□□□ -0.36
PRUNE2-213ENST00000489555 CERKQ8TCT0 537 aa12.79□□□□□ -0.36
PRUNE2-213ENST00000489555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.36
PRUNE2-213ENST00000489555 ARID3CA6NKF2 412 aa12.77□□□□□ -0.37
PRUNE2-213ENST00000489555 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
PRUNE2-213ENST00000489555 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
PRUNE2-213ENST00000489555 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
PRUNE2-213ENST00000489555 HSPA2P54652 639 aa12.74□□□□□ -0.37
PRUNE2-213ENST00000489555 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
PRUNE2-213ENST00000489555 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
PRUNE2-213ENST00000489555 YEATS2Q9ULM3 1422 aa12.72□□□□□ -0.37
PRUNE2-213ENST00000489555 MYO5CQ9NQX4 1742 aa12.72□□□□□ -0.37
PRUNE2-213ENST00000489555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms