RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 KIAA0586Q9BVV6 1533 aa32.38■■■□□ 2.77
MRPL55-230ENST00000489430 ERCC6L2Q5T890 1561 aa32.35■■■□□ 2.77
MRPL55-230ENST00000489430 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
MRPL55-230ENST00000489430 RAPGEF2Q9Y4G8 1499 aa32.23■■■□□ 2.75
MRPL55-230ENST00000489430 TRHP20396 242 aaPredicted RBP32.15■■■□□ 2.74
MRPL55-230ENST00000489430 IQGAP2Q13576 1575 aa32.07■■■□□ 2.72
MRPL55-230ENST00000489430 CARMIL2Q6F5E8 1435 aa32.06■■■□□ 2.72
MRPL55-230ENST00000489430 PRXQ9BXM0 1461 aa32.05■■■□□ 2.72
MRPL55-230ENST00000489430 EEA1Q15075 1411 aa31.99■■■□□ 2.71
MRPL55-230ENST00000489430 TNIKQ9UKE5 1360 aa31.96■■■□□ 2.71
MRPL55-230ENST00000489430 PTPRGP23470 1445 aa31.96■■■□□ 2.71
MRPL55-230ENST00000489430 CSRNP3Q8WYN3 585 aa31.95■■■□□ 2.71
MRPL55-230ENST00000489430 UGGT2Q9NYU1 1516 aa31.95■■■□□ 2.7
MRPL55-230ENST00000489430 NPM1P06748 294 aaKnown RBP eCLIP31.92■■■□□ 2.7
MRPL55-230ENST00000489430 DISP1Q96F81 1524 aa31.89■■■□□ 2.7
MRPL55-230ENST00000489430 ADCY10Q96PN6 1610 aa31.83■■■□□ 2.69
MRPL55-230ENST00000489430 CHIC1Q5VXU3 224 aa31.8■■■□□ 2.68
MRPL55-230ENST00000489430 MAPKBP1O60336 1514 aa31.8■■■□□ 2.68
MRPL55-230ENST00000489430 CTTNBP2Q8WZ74 1663 aa31.78■■■□□ 2.68
MRPL55-230ENST00000489430 GOLGA3Q08378 1498 aa31.78■■■□□ 2.68
MRPL55-230ENST00000489430 UHRF1BP1LA0JNW5 1464 aa31.76■■■□□ 2.67
MRPL55-230ENST00000489430 KIAA0556O60303 1618 aa31.75■■■□□ 2.67
MRPL55-230ENST00000489430 UACAQ9BZF9 1416 aa31.73■■■□□ 2.67
MRPL55-230ENST00000489430 ABCC2Q92887 1545 aa31.7■■■□□ 2.67
MRPL55-230ENST00000489430 TTBK1Q5TCY1 1321 aaPredicted RBP31.7■■■□□ 2.66
MRPL55-230ENST00000489430 ABCC10Q5T3U5 1492 aa31.69■■■□□ 2.66
MRPL55-230ENST00000489430 FAM69CQ0P6D2 419 aa31.61■■■□□ 2.65
MRPL55-230ENST00000489430 FAM9AQ8IZU1 332 aaPredicted RBP31.6■■■□□ 2.65
MRPL55-230ENST00000489430 KDM5BQ9UGL1 1544 aa31.58■■■□□ 2.65
MRPL55-230ENST00000489430 PLB1Q6P1J6 1458 aa31.56■■■□□ 2.64
MRPL55-230ENST00000489430 KIF21BO75037 1637 aa31.56■■■□□ 2.64
MRPL55-230ENST00000489430 KIF13AQ9H1H9 1805 aa31.55■■■□□ 2.64
MRPL55-230ENST00000489430 DIP2BQ9P265 1576 aa31.55■■■□□ 2.64
MRPL55-230ENST00000489430 ASXL2Q76L83 1435 aa31.5■■■□□ 2.63
MRPL55-230ENST00000489430 ABCA8O94911 1581 aa31.46■■■□□ 2.63
MRPL55-230ENST00000489430 SAMD9Q5K651 1589 aa31.45■■■□□ 2.63
MRPL55-230ENST00000489430 GLI2P10070 1586 aa31.39■■■□□ 2.62
MRPL55-230ENST00000489430 P3H3Q8IVL6 736 aa31.38■■■□□ 2.61
MRPL55-230ENST00000489430 ZCCHC11Q5TAX3 1644 aaKnown RBP31.38■■■□□ 2.61
MRPL55-230ENST00000489430 EPRSP07814 1512 aaKnown RBP31.33■■■□□ 2.61
MRPL55-230ENST00000489430 EFCAB5A4FU69 1503 aa31.32■■■□□ 2.6
MRPL55-230ENST00000489430 WDR7Q9Y4E6 1490 aa31.32■■■□□ 2.6
MRPL55-230ENST00000489430 UBTFP17480 764 aaKnown RBP31.31■■■□□ 2.6
MRPL55-230ENST00000489430 RANGAP1P46060 587 aaPredicted RBP31.24■■■□□ 2.59
MRPL55-230ENST00000489430 FHOD3Q2V2M9 1422 aa31.24■■■□□ 2.59
MRPL55-230ENST00000489430 ATP10BO94823 1461 aa31.21■■■□□ 2.59
MRPL55-230ENST00000489430 RAPGEF6Q8TEU7 1601 aa31.19■■■□□ 2.58
MRPL55-230ENST00000489430 MAP3K4Q9Y6R4 1608 aa31.16■■■□□ 2.58
MRPL55-230ENST00000489430 TEX14Q8IWB6 1497 aa31.14■■■□□ 2.58
MRPL55-230ENST00000489430 TSPOAP1O95153 1857 aa31.12■■■□□ 2.57
MRPL55-230ENST00000489430 EHMT2Q96KQ7 1210 aa31.12■■■□□ 2.57
MRPL55-230ENST00000489430 NUP153P49790 1475 aaKnown RBP31.12■■■□□ 2.57
MRPL55-230ENST00000489430 KDM6BO15054 1643 aa31.12■■■□□ 2.57
MRPL55-230ENST00000489430 KCNH8Q96L42 1107 aa31.1■■■□□ 2.57
MRPL55-230ENST00000489430 PPRC1Q5VV67 1664 aaKnown RBP31.09■■■□□ 2.57
MRPL55-230ENST00000489430 FMN1Q68DA7 1419 aa31.07■■■□□ 2.57
MRPL55-230ENST00000489430 ARID3CA6NKF2 412 aa31.07■■■□□ 2.56
MRPL55-230ENST00000489430 CD109Q6YHK3 1445 aa31.07■■■□□ 2.56
MRPL55-230ENST00000489430 MAGI3Q5TCQ9 1506 aa31.06■■■□□ 2.56
MRPL55-230ENST00000489430 ARHGAP35Q9NRY4 1499 aa31.06■■■□□ 2.56
MRPL55-230ENST00000489430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.03■■■□□ 2.56
MRPL55-230ENST00000489430 HNRNPUL2Q1KMD3 747 aaKnown RBP31.03■■■□□ 2.56
MRPL55-230ENST00000489430 CFAP43Q8NDM7 1665 aa31.03■■■□□ 2.56
MRPL55-230ENST00000489430 PLEKHD1A6NEE1 506 aa30.98■■■□□ 2.55
MRPL55-230ENST00000489430 ABCA9Q8IUA7 1624 aa30.92■■■□□ 2.54
MRPL55-230ENST00000489430 COL17A1Q9UMD9 1497 aaPredicted RBP30.91■■■□□ 2.54
MRPL55-230ENST00000489430 PHLDB1Q86UU1 1377 aa30.9■■■□□ 2.54
MRPL55-230ENST00000489430 HECW1Q76N89 1606 aa30.86■■■□□ 2.53
MRPL55-230ENST00000489430 CDK11AQ9UQ88 783 aaPredicted RBP30.83■■■□□ 2.53
MRPL55-230ENST00000489430 ARAP3Q8WWN8 1544 aa30.8■■■□□ 2.52
MRPL55-230ENST00000489430 CLIP1P30622 1438 aa30.8■■■□□ 2.52
MRPL55-230ENST00000489430 CDK13Q14004 1512 aaKnown RBP30.79■■■□□ 2.52
MRPL55-230ENST00000489430 ATP1B4Q9UN42 357 aaPredicted RBP30.79■■■□□ 2.52
MRPL55-230ENST00000489430 NEO1Q92859 1461 aa30.78■■■□□ 2.52
MRPL55-230ENST00000489430 AEBP2Q6ZN18 517 aaPredicted RBP30.78■■■□□ 2.52
MRPL55-230ENST00000489430 CASKIN1Q8WXD9 1431 aa30.76■■■□□ 2.51
MRPL55-230ENST00000489430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.71■■■□□ 2.51
MRPL55-230ENST00000489430 CCDC18Q5T9S5 1454 aa30.68■■■□□ 2.5
MRPL55-230ENST00000489430 TROQ12816 1431 aaPredicted RBP30.66■■■□□ 2.5
MRPL55-230ENST00000489430 FYCO1Q9BQS8 1478 aa30.66■■■□□ 2.5
MRPL55-230ENST00000489430 PCF11O94913 1555 aaKnown RBP30.62■■■□□ 2.49
MRPL55-230ENST00000489430 FANCAO15360 1455 aa30.62■■■□□ 2.49
MRPL55-230ENST00000489430 PLCH2O75038 1416 aa30.61■■■□□ 2.49
MRPL55-230ENST00000489430 TTC37Q6PGP7 1564 aa30.61■■■□□ 2.49
MRPL55-230ENST00000489430 CFAP74Q9C0B2 1584 aa30.59■■■□□ 2.49
MRPL55-230ENST00000489430 KDM4FA0A1W2PPD8 638 aa30.59■■■□□ 2.49
MRPL55-230ENST00000489430 AKNAQ7Z591 1439 aa30.58■■■□□ 2.49
MRPL55-230ENST00000489430 CEP162Q5TB80 1403 aa30.56■■■□□ 2.48
MRPL55-230ENST00000489430 KIF14Q15058 1648 aa30.55■■■□□ 2.48
MRPL55-230ENST00000489430 RAPGEF3O95398 923 aa30.55■■■□□ 2.48
MRPL55-230ENST00000489430 DENND4BO75064 1496 aaPredicted RBP30.53■■■□□ 2.48
MRPL55-230ENST00000489430 LRRIQ1Q96JM4 1722 aa30.52■■■□□ 2.48
MRPL55-230ENST00000489430 EFCAB2Q5VUJ9 269 aa30.51■■■□□ 2.47
MRPL55-230ENST00000489430 ADGRL1O94910 1474 aa30.47■■■□□ 2.47
MRPL55-230ENST00000489430 FRMPD1Q5SYB0 1578 aa30.45■■■□□ 2.46
MRPL55-230ENST00000489430 MYO5CQ9NQX4 1742 aa30.42■■■□□ 2.46
MRPL55-230ENST00000489430 LOC105371045A0A1W2PR82 267 aa30.42■■■□□ 2.46
MRPL55-230ENST00000489430 SCAPERQ9BY12 1400 aa30.4■■■□□ 2.46
MRPL55-230ENST00000489430 MAGI2Q86UL8 1455 aa30.38■■■□□ 2.45
MRPL55-230ENST00000489430 RICTORQ6R327 1708 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms