RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
GABRE-210ENST00000489333 EEA1Q15075 1411 aa13.58□□□□□ -0.24
GABRE-210ENST00000489333 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
GABRE-210ENST00000489333 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
GABRE-210ENST00000489333 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
GABRE-210ENST00000489333 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
GABRE-210ENST00000489333 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
GABRE-210ENST00000489333 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
GABRE-210ENST00000489333 KCNA4P22459 653 aa13.51□□□□□ -0.25
GABRE-210ENST00000489333 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
GABRE-210ENST00000489333 BIVM-ERCC5R4GMW8 1640 aa13.48□□□□□ -0.25
GABRE-210ENST00000489333 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
GABRE-210ENST00000489333 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
GABRE-210ENST00000489333 ADAMTS12P58397 1594 aa13.45□□□□□ -0.26
GABRE-210ENST00000489333 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
GABRE-210ENST00000489333 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
GABRE-210ENST00000489333 CEP170Q5SW79 1584 aa13.42□□□□□ -0.26
GABRE-210ENST00000489333 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
GABRE-210ENST00000489333 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
GABRE-210ENST00000489333 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
GABRE-210ENST00000489333 NUP160Q12769 1436 aa13.38□□□□□ -0.27
GABRE-210ENST00000489333 ERICH3Q5RHP9 1530 aa13.36□□□□□ -0.27
GABRE-210ENST00000489333 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
GABRE-210ENST00000489333 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
GABRE-210ENST00000489333 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
GABRE-210ENST00000489333 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
GABRE-210ENST00000489333 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
GABRE-210ENST00000489333 PRG4Q92954 1404 aaPredicted RBP13.28□□□□□ -0.28
GABRE-210ENST00000489333 KIF21BO75037 1637 aa13.28□□□□□ -0.28
GABRE-210ENST00000489333 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
GABRE-210ENST00000489333 KIF13AQ9H1H9 1805 aa13.25□□□□□ -0.29
GABRE-210ENST00000489333 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
GABRE-210ENST00000489333 JPH4Q96JJ6 628 aa13.23□□□□□ -0.29
GABRE-210ENST00000489333 CUL7Q14999 1698 aa13.2□□□□□ -0.3
GABRE-210ENST00000489333 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
GABRE-210ENST00000489333 IGF1RP08069 1367 aa13.16□□□□□ -0.3
GABRE-210ENST00000489333 ADCY10Q96PN6 1610 aa13.16□□□□□ -0.3
GABRE-210ENST00000489333 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
GABRE-210ENST00000489333 PPARGC1BQ86YN6 1023 aaKnown RBP13.14□□□□□ -0.31
GABRE-210ENST00000489333 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
GABRE-210ENST00000489333 TSPOAP1O95153 1857 aa13.12□□□□□ -0.31
GABRE-210ENST00000489333 DIP2BQ9P265 1576 aa13.11□□□□□ -0.31
GABRE-210ENST00000489333 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
GABRE-210ENST00000489333 FAM69CQ0P6D2 419 aa13.11□□□□□ -0.31
GABRE-210ENST00000489333 MAPKBP1O60336 1514 aa13.11□□□□□ -0.31
GABRE-210ENST00000489333 TTBK1Q5TCY1 1321 aaPredicted RBP13.11□□□□□ -0.31
GABRE-210ENST00000489333 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
GABRE-210ENST00000489333 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
GABRE-210ENST00000489333 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
GABRE-210ENST00000489333 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
GABRE-210ENST00000489333 PTPRGP23470 1445 aa13.05□□□□□ -0.32
GABRE-210ENST00000489333 VPS8Q8N3P4 1428 aa13.05□□□□□ -0.32
GABRE-210ENST00000489333 CLIP1P30622 1438 aa13.04□□□□□ -0.32
GABRE-210ENST00000489333 CCER1Q8TC90 406 aaPredicted RBP13.03□□□□□ -0.32
GABRE-210ENST00000489333 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
GABRE-210ENST00000489333 KDM6BO15054 1643 aa13.02□□□□□ -0.32
GABRE-210ENST00000489333 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
GABRE-210ENST00000489333 APLP2Q06481 763 aa13□□□□□ -0.33
GABRE-210ENST00000489333 ABCC2Q92887 1545 aa12.98□□□□□ -0.33
GABRE-210ENST00000489333 PRXQ9BXM0 1461 aa12.97□□□□□ -0.33
GABRE-210ENST00000489333 RAPGEF2Q9Y4G8 1499 aa12.97□□□□□ -0.33
GABRE-210ENST00000489333 DISP1Q96F81 1524 aa12.97□□□□□ -0.33
GABRE-210ENST00000489333 ASXL2Q76L83 1435 aa12.96□□□□□ -0.34
GABRE-210ENST00000489333 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.34
GABRE-210ENST00000489333 PPRC1Q5VV67 1664 aaKnown RBP12.95□□□□□ -0.34
GABRE-210ENST00000489333 UACAQ9BZF9 1416 aa12.95□□□□□ -0.34
GABRE-210ENST00000489333 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
GABRE-210ENST00000489333 UHRF1BP1LA0JNW5 1464 aa12.94□□□□□ -0.34
GABRE-210ENST00000489333 UGGT2Q9NYU1 1516 aa12.93□□□□□ -0.34
GABRE-210ENST00000489333 PLB1Q6P1J6 1458 aa12.93□□□□□ -0.34
GABRE-210ENST00000489333 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
GABRE-210ENST00000489333 GLI2P10070 1586 aa12.92□□□□□ -0.34
GABRE-210ENST00000489333 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
GABRE-210ENST00000489333 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
GABRE-210ENST00000489333 MAP3K4Q9Y6R4 1608 aa12.88□□□□□ -0.35
GABRE-210ENST00000489333 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
GABRE-210ENST00000489333 KDM4FA0A1W2PPD8 638 aa12.87□□□□□ -0.35
GABRE-210ENST00000489333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
GABRE-210ENST00000489333 MAP3K1Q13233 1512 aa12.85□□□□□ -0.35
GABRE-210ENST00000489333 TEX14Q8IWB6 1497 aa12.83□□□□□ -0.36
GABRE-210ENST00000489333 WDR7Q9Y4E6 1490 aa12.83□□□□□ -0.36
GABRE-210ENST00000489333 ABCA8O94911 1581 aa12.81□□□□□ -0.36
GABRE-210ENST00000489333 COL17A1Q9UMD9 1497 aaPredicted RBP12.8□□□□□ -0.36
GABRE-210ENST00000489333 ADGRL1O94910 1474 aa12.79□□□□□ -0.36
GABRE-210ENST00000489333 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
GABRE-210ENST00000489333 CFAP43Q8NDM7 1665 aa12.79□□□□□ -0.36
GABRE-210ENST00000489333 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
GABRE-210ENST00000489333 CENPBP07199 599 aaPredicted RBP12.77□□□□□ -0.37
GABRE-210ENST00000489333 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
GABRE-210ENST00000489333 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
GABRE-210ENST00000489333 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
GABRE-210ENST00000489333 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
GABRE-210ENST00000489333 DIEXFQ68CQ4 756 aaKnown RBP12.76□□□□□ -0.37
GABRE-210ENST00000489333 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
GABRE-210ENST00000489333 CD109Q6YHK3 1445 aa12.75□□□□□ -0.37
GABRE-210ENST00000489333 P3H3Q8IVL6 736 aa12.75□□□□□ -0.37
GABRE-210ENST00000489333 RRBP1Q9P2E9 1410 aaKnown RBP12.75□□□□□ -0.37
GABRE-210ENST00000489333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.374e-13■■□□□ 12.7
GABRE-210ENST00000489333 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
GABRE-210ENST00000489333 SAMD9Q5K651 1589 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms