RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 JPH4Q96JJ6 628 aa16.03■□□□□ 0.16
FDPS-214ENST00000489324 GOLGA3Q08378 1498 aa15.99■□□□□ 0.15
FDPS-214ENST00000489324 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
FDPS-214ENST00000489324 IQGAP2Q13576 1575 aa15.96■□□□□ 0.15
FDPS-214ENST00000489324 ARHGEF11O15085 1522 aa15.96■□□□□ 0.15
FDPS-214ENST00000489324 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
FDPS-214ENST00000489324 UBTFP17480 764 aaKnown RBP15.93■□□□□ 0.14
FDPS-214ENST00000489324 CARMIL2Q6F5E8 1435 aa15.93■□□□□ 0.14
FDPS-214ENST00000489324 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
FDPS-214ENST00000489324 CTTNBP2Q8WZ74 1663 aa15.9■□□□□ 0.14
FDPS-214ENST00000489324 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
FDPS-214ENST00000489324 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
FDPS-214ENST00000489324 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
FDPS-214ENST00000489324 TNIKQ9UKE5 1360 aa15.86■□□□□ 0.13
FDPS-214ENST00000489324 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
FDPS-214ENST00000489324 DISP1Q96F81 1524 aa15.84■□□□□ 0.13
FDPS-214ENST00000489324 CYB5RLQ6IPT4 315 aa15.83■□□□□ 0.12
FDPS-214ENST00000489324 ERCC6L2Q5T890 1561 aa15.83■□□□□ 0.12
FDPS-214ENST00000489324 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
FDPS-214ENST00000489324 PTPRGP23470 1445 aa15.81■□□□□ 0.12
FDPS-214ENST00000489324 KIAA0556O60303 1618 aa15.79■□□□□ 0.12
FDPS-214ENST00000489324 EFCAB5A4FU69 1503 aa15.79■□□□□ 0.12
FDPS-214ENST00000489324 SAMD9Q5K651 1589 aa15.77■□□□□ 0.11
FDPS-214ENST00000489324 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
FDPS-214ENST00000489324 RANGAP1P46060 587 aaPredicted RBP15.73■□□□□ 0.11
FDPS-214ENST00000489324 UACAQ9BZF9 1416 aa15.71■□□□□ 0.11
FDPS-214ENST00000489324 P3H3Q8IVL6 736 aa15.71■□□□□ 0.11
FDPS-214ENST00000489324 UHRF1BP1LA0JNW5 1464 aa15.7■□□□□ 0.1
FDPS-214ENST00000489324 ARHGAP35Q9NRY4 1499 aa15.7■□□□□ 0.1
FDPS-214ENST00000489324 CLIP1P30622 1438 aa15.69■□□□□ 0.1
FDPS-214ENST00000489324 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
FDPS-214ENST00000489324 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
FDPS-214ENST00000489324 FMN1Q68DA7 1419 aa15.68■□□□□ 0.1
FDPS-214ENST00000489324 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
FDPS-214ENST00000489324 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
FDPS-214ENST00000489324 ABCC2Q92887 1545 aa15.64■□□□□ 0.09
FDPS-214ENST00000489324 ABCA8O94911 1581 aa15.63■□□□□ 0.09
FDPS-214ENST00000489324 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
FDPS-214ENST00000489324 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
FDPS-214ENST00000489324 KDM5BQ9UGL1 1544 aa15.59■□□□□ 0.09
FDPS-214ENST00000489324 RAPGEF6Q8TEU7 1601 aa15.57■□□□□ 0.08
FDPS-214ENST00000489324 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
FDPS-214ENST00000489324 CASKIN1Q8WXD9 1431 aa15.55■□□□□ 0.08
FDPS-214ENST00000489324 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
FDPS-214ENST00000489324 ATP10BO94823 1461 aa15.52■□□□□ 0.08
FDPS-214ENST00000489324 FYCO1Q9BQS8 1478 aa15.51■□□□□ 0.07
FDPS-214ENST00000489324 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
FDPS-214ENST00000489324 CDK11AQ9UQ88 783 aaPredicted RBP15.49■□□□□ 0.07
FDPS-214ENST00000489324 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
FDPS-214ENST00000489324 VPS8Q8N3P4 1428 aa15.49■□□□□ 0.07
FDPS-214ENST00000489324 ZCCHC11Q5TAX3 1644 aaKnown RBP15.48■□□□□ 0.07
FDPS-214ENST00000489324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
FDPS-214ENST00000489324 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
FDPS-214ENST00000489324 ATP1B4Q9UN42 357 aaPredicted RBP15.48■□□□□ 0.07
FDPS-214ENST00000489324 CCDC18Q5T9S5 1454 aa15.47■□□□□ 0.07
FDPS-214ENST00000489324 PLEKHD1A6NEE1 506 aa15.47■□□□□ 0.07
FDPS-214ENST00000489324 EPRSP07814 1512 aaKnown RBP15.47■□□□□ 0.07
FDPS-214ENST00000489324 ABCC10Q5T3U5 1492 aa15.46■□□□□ 0.06
FDPS-214ENST00000489324 WDR7Q9Y4E6 1490 aa15.46■□□□□ 0.06
FDPS-214ENST00000489324 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
FDPS-214ENST00000489324 PCF11O94913 1555 aaKnown RBP15.44■□□□□ 0.06
FDPS-214ENST00000489324 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
FDPS-214ENST00000489324 FAM69CQ0P6D2 419 aa15.41■□□□□ 0.06
FDPS-214ENST00000489324 GLI2P10070 1586 aa15.4■□□□□ 0.06
FDPS-214ENST00000489324 CDK13Q14004 1512 aaKnown RBP15.39■□□□□ 0.05
FDPS-214ENST00000489324 DIP2BQ9P265 1576 aa15.37■□□□□ 0.05
FDPS-214ENST00000489324 TROQ12816 1431 aaPredicted RBP15.37■□□□□ 0.05
FDPS-214ENST00000489324 APLP2Q06481 763 aa15.37■□□□□ 0.05
FDPS-214ENST00000489324 KCNH8Q96L42 1107 aa15.37■□□□□ 0.05
FDPS-214ENST00000489324 MAP3K1Q13233 1512 aa15.37■□□□□ 0.05
FDPS-214ENST00000489324 MTUS2Q5JR59 1369 aa15.32■□□□□ 0.04
FDPS-214ENST00000489324 CD109Q6YHK3 1445 aa15.3■□□□□ 0.04
FDPS-214ENST00000489324 LRRIQ1Q96JM4 1722 aa15.3■□□□□ 0.04
FDPS-214ENST00000489324 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
FDPS-214ENST00000489324 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
FDPS-214ENST00000489324 ABCA9Q8IUA7 1624 aa15.28■□□□□ 0.04
FDPS-214ENST00000489324 MAGI3Q5TCQ9 1506 aa15.28■□□□□ 0.04
FDPS-214ENST00000489324 TEX14Q8IWB6 1497 aa15.28■□□□□ 0.04
FDPS-214ENST00000489324 EHBP1L1Q8N3D4 1523 aa15.27■□□□□ 0.04
FDPS-214ENST00000489324 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
FDPS-214ENST00000489324 KIF14Q15058 1648 aa15.27■□□□□ 0.03
FDPS-214ENST00000489324 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
FDPS-214ENST00000489324 PHLDB1Q86UU1 1377 aa15.26■□□□□ 0.03
FDPS-214ENST00000489324 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.26■□□□□ 0.03
FDPS-214ENST00000489324 LRRC9Q6ZRR7 1453 aa15.26■□□□□ 0.03
FDPS-214ENST00000489324 PLCH2O75038 1416 aa15.24■□□□□ 0.03
FDPS-214ENST00000489324 ARAP3Q8WWN8 1544 aa15.23■□□□□ 0.03
FDPS-214ENST00000489324 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
FDPS-214ENST00000489324 NEO1Q92859 1461 aa15.2■□□□□ 0.02
FDPS-214ENST00000489324 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
FDPS-214ENST00000489324 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
FDPS-214ENST00000489324 TTC37Q6PGP7 1564 aa15.19■□□□□ 0.02
FDPS-214ENST00000489324 NCOA2Q15596 1464 aa15.18■□□□□ 0.02
FDPS-214ENST00000489324 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
FDPS-214ENST00000489324 GPATCH8Q9UKJ3 1502 aaKnown RBP15.17■□□□□ 0.02
FDPS-214ENST00000489324 PPRC1Q5VV67 1664 aaKnown RBP15.16■□□□□ 0.02
FDPS-214ENST00000489324 FANCAO15360 1455 aa15.16■□□□□ 0.02
FDPS-214ENST00000489324 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
FDPS-214ENST00000489324 CFDP1Q9UEE9 299 aaPredicted RBP15.15■□□□□ 0.02
FDPS-214ENST00000489324 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms