RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 GRIN2AQ12879 1464 aa28.43■■■□□ 2.14
CD40-206ENST00000489304 FBLN2P98095 1184 aa28.41■■■□□ 2.14
CD40-206ENST00000489304 ARHGAP35Q9NRY4 1499 aa28.39■■■□□ 2.13
CD40-206ENST00000489304 ARAP1Q96P48 1450 aa28.37■■■□□ 2.13
CD40-206ENST00000489304 VPS8Q8N3P4 1428 aa28.36■■■□□ 2.13
CD40-206ENST00000489304 P3H3Q8IVL6 736 aa28.29■■■□□ 2.12
CD40-206ENST00000489304 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
CD40-206ENST00000489304 IQGAP2Q13576 1575 aa28.25■■■□□ 2.11
CD40-206ENST00000489304 KIAA0586Q9BVV6 1533 aa28.24■■■□□ 2.11
CD40-206ENST00000489304 NUP160Q12769 1436 aa28.24■■■□□ 2.11
CD40-206ENST00000489304 TRIM26Q12899 539 aaPredicted RBP28.23■■■□□ 2.11
CD40-206ENST00000489304 EFCAB5A4FU69 1503 aa28.22■■■□□ 2.11
CD40-206ENST00000489304 CHD1O14646 1710 aa28.21■■■□□ 2.11
CD40-206ENST00000489304 FHOD3Q2V2M9 1422 aa28.2■■■□□ 2.1
CD40-206ENST00000489304 PPARGC1BQ86YN6 1023 aaKnown RBP28.19■■■□□ 2.1
CD40-206ENST00000489304 PCGF6Q9BYE7 350 aa28.17■■■□□ 2.1
CD40-206ENST00000489304 SAMD9Q5K651 1589 aa28.16■■■□□ 2.1
CD40-206ENST00000489304 UGGT2Q9NYU1 1516 aa28.12■■■□□ 2.09
CD40-206ENST00000489304 DISP1Q96F81 1524 aa28.04■■■□□ 2.08
CD40-206ENST00000489304 JPH4Q96JJ6 628 aa28.04■■■□□ 2.08
CD40-206ENST00000489304 APLP2Q06481 763 aa28.01■■■□□ 2.07
CD40-206ENST00000489304 TTBK1Q5TCY1 1321 aaPredicted RBP28■■■□□ 2.07
CD40-206ENST00000489304 KIAA0556O60303 1618 aa27.99■■■□□ 2.07
CD40-206ENST00000489304 PCF11O94913 1555 aaKnown RBP27.97■■■□□ 2.07
CD40-206ENST00000489304 FMN1Q68DA7 1419 aa27.94■■■□□ 2.06
CD40-206ENST00000489304 ATP1B4Q9UN42 357 aaPredicted RBP27.92■■■□□ 2.06
CD40-206ENST00000489304 MAP3K1Q13233 1512 aa27.92■■■□□ 2.06
CD40-206ENST00000489304 CASKIN1Q8WXD9 1431 aa27.9■■■□□ 2.06
CD40-206ENST00000489304 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
CD40-206ENST00000489304 FYCO1Q9BQS8 1478 aa27.89■■■□□ 2.06
CD40-206ENST00000489304 PRG4Q92954 1404 aaPredicted RBP27.88■■■□□ 2.05
CD40-206ENST00000489304 CARMIL2Q6F5E8 1435 aa27.87■■■□□ 2.05
CD40-206ENST00000489304 KANK4Q5T7N3 995 aaPredicted RBP27.87■■■□□ 2.05
CD40-206ENST00000489304 TIAM1Q13009 1591 aa27.85■■■□□ 2.05
CD40-206ENST00000489304 SHROOM2Q13796 1616 aa27.84■■■□□ 2.05
CD40-206ENST00000489304 CFAP43Q8NDM7 1665 aa27.83■■■□□ 2.05
CD40-206ENST00000489304 ERCC6L2Q5T890 1561 aa27.79■■■□□ 2.04
CD40-206ENST00000489304 OSCARQ8IYS5 282 aa27.75■■■□□ 2.03
CD40-206ENST00000489304 LRRIQ1Q96JM4 1722 aa27.74■■■□□ 2.03
CD40-206ENST00000489304 PLB1Q6P1J6 1458 aa27.7■■■□□ 2.03
CD40-206ENST00000489304 LRRC9Q6ZRR7 1453 aa27.7■■■□□ 2.03
CD40-206ENST00000489304 ARID3CA6NKF2 412 aa27.7■■■□□ 2.02
CD40-206ENST00000489304 HECW1Q76N89 1606 aa27.69■■■□□ 2.02
CD40-206ENST00000489304 RAPGEF6Q8TEU7 1601 aa27.67■■■□□ 2.02
CD40-206ENST00000489304 PTPRGP23470 1445 aa27.67■■■□□ 2.02
CD40-206ENST00000489304 NUP153P49790 1475 aaKnown RBP27.64■■■□□ 2.02
CD40-206ENST00000489304 EPRSP07814 1512 aaKnown RBP27.64■■■□□ 2.01
CD40-206ENST00000489304 CDK13Q14004 1512 aaKnown RBP27.64■■■□□ 2.01
CD40-206ENST00000489304 ABCA8O94911 1581 aa27.61■■■□□ 2.01
CD40-206ENST00000489304 CCDC18Q5T9S5 1454 aa27.6■■■□□ 2.01
CD40-206ENST00000489304 MAGI3Q5TCQ9 1506 aa27.55■■■□□ 2
CD40-206ENST00000489304 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
CD40-206ENST00000489304 RRBP1Q9P2E9 1410 aaKnown RBP27.53■■■□□ 2
CD40-206ENST00000489304 UACAQ9BZF9 1416 aa27.5■■□□□ 1.99
CD40-206ENST00000489304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.5■■□□□ 1.99
CD40-206ENST00000489304 HNRNPUL2Q1KMD3 747 aaKnown RBP27.5■■□□□ 1.99
CD40-206ENST00000489304 EHBP1L1Q8N3D4 1523 aa27.47■■□□□ 1.99
CD40-206ENST00000489304 PHLDB1Q86UU1 1377 aa27.46■■□□□ 1.99
CD40-206ENST00000489304 ATP10BO94823 1461 aa27.45■■□□□ 1.99
CD40-206ENST00000489304 SUPT6HQ7KZ85 1726 aaKnown RBP27.42■■□□□ 1.98
CD40-206ENST00000489304 HRCP23327 699 aa27.41■■□□□ 1.98
CD40-206ENST00000489304 CCNB3Q8WWL7 1395 aa27.41■■□□□ 1.98
CD40-206ENST00000489304 ABCC2Q92887 1545 aa27.4■■□□□ 1.98
CD40-206ENST00000489304 NCOA2Q15596 1464 aa27.38■■□□□ 1.97
CD40-206ENST00000489304 CDK11AQ9UQ88 783 aaPredicted RBP27.36■■□□□ 1.97
CD40-206ENST00000489304 ARHGEF11O15085 1522 aa27.34■■□□□ 1.97
CD40-206ENST00000489304 UHRF1BP1LA0JNW5 1464 aa27.33■■□□□ 1.97
CD40-206ENST00000489304 TROQ12816 1431 aaPredicted RBP27.33■■□□□ 1.96
CD40-206ENST00000489304 PLEKHD1A6NEE1 506 aa27.3■■□□□ 1.96
CD40-206ENST00000489304 ADCY10Q96PN6 1610 aa27.27■■□□□ 1.96
CD40-206ENST00000489304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.26■■□□□ 1.95
CD40-206ENST00000489304 FGD6Q6ZV73 1430 aa27.25■■□□□ 1.95
CD40-206ENST00000489304 MYOM3Q5VTT5 1437 aa27.25■■□□□ 1.95
CD40-206ENST00000489304 KDM5BQ9UGL1 1544 aa27.24■■□□□ 1.95
CD40-206ENST00000489304 KIF14Q15058 1648 aa27.23■■□□□ 1.95
CD40-206ENST00000489304 ZCCHC11Q5TAX3 1644 aaKnown RBP27.23■■□□□ 1.95
CD40-206ENST00000489304 FAM50AQ14320 339 aaKnown RBP27.21■■□□□ 1.95
CD40-206ENST00000489304 RIMBP3CA6NJZ7 1639 aa27.18■■□□□ 1.94
CD40-206ENST00000489304 RIMBP3BA6NNM3 1639 aa27.18■■□□□ 1.94
CD40-206ENST00000489304 RIMBP3Q9UFD9 1639 aa27.18■■□□□ 1.94
CD40-206ENST00000489304 ITGAEP38570 1179 aa27.17■■□□□ 1.94
CD40-206ENST00000489304 PTPN23Q9H3S7 1636 aa27.14■■□□□ 1.93
CD40-206ENST00000489304 ABCC10Q5T3U5 1492 aa27.13■■□□□ 1.93
CD40-206ENST00000489304 ZEB1P37275 1124 aaPredicted RBP27.11■■□□□ 1.93
CD40-206ENST00000489304 MIA2Q96PC5 1412 aa27.11■■□□□ 1.93
CD40-206ENST00000489304 CYB5RLQ6IPT4 315 aa27.1■■□□□ 1.93
CD40-206ENST00000489304 TCOF1Q13428 1488 aaKnown RBP27.1■■□□□ 1.93
CD40-206ENST00000489304 GPATCH8Q9UKJ3 1502 aaKnown RBP27.1■■□□□ 1.93
CD40-206ENST00000489304 KCNH8Q96L42 1107 aa27.09■■□□□ 1.93
CD40-206ENST00000489304 CCER1Q8TC90 406 aaPredicted RBP27.07■■□□□ 1.92
CD40-206ENST00000489304 ITSN2Q9NZM3 1697 aa27.05■■□□□ 1.92
CD40-206ENST00000489304 ZNF644Q9H582 1327 aaPredicted RBP27.04■■□□□ 1.92
CD40-206ENST00000489304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.02■■□□□ 1.92
CD40-206ENST00000489304 NPM1P06748 294 aaKnown RBP eCLIP27.02■■□□□ 1.92
CD40-206ENST00000489304 CFDP1Q9UEE9 299 aaPredicted RBP27.02■■□□□ 1.92
CD40-206ENST00000489304 ASXL2Q76L83 1435 aa27■■□□□ 1.91
CD40-206ENST00000489304 CDC42BPAQ5VT25 1732 aa27■■□□□ 1.91
CD40-206ENST00000489304 TTC37Q6PGP7 1564 aa27■■□□□ 1.91
CD40-206ENST00000489304 PTPRKQ15262 1439 aa27■■□□□ 1.91
CD40-206ENST00000489304 WDR7Q9Y4E6 1490 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms