RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
ITSN1-231ENST00000489261 FBLN2P98095 1184 aa16.97■□□□□ 0.31
ITSN1-231ENST00000489261 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
ITSN1-231ENST00000489261 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
ITSN1-231ENST00000489261 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
ITSN1-231ENST00000489261 IGF1RP08069 1367 aa16.89■□□□□ 0.29
ITSN1-231ENST00000489261 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
ITSN1-231ENST00000489261 CLIP1P30622 1438 aa16.87■□□□□ 0.29
ITSN1-231ENST00000489261 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
ITSN1-231ENST00000489261 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
ITSN1-231ENST00000489261 NUP160Q12769 1436 aa16.84■□□□□ 0.29
ITSN1-231ENST00000489261 HRCP23327 699 aa16.82■□□□□ 0.28
ITSN1-231ENST00000489261 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
ITSN1-231ENST00000489261 SHROOM2Q13796 1616 aa16.8■□□□□ 0.28
ITSN1-231ENST00000489261 CUL7Q14999 1698 aa16.79■□□□□ 0.28
ITSN1-231ENST00000489261 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
ITSN1-231ENST00000489261 CYB5RLQ6IPT4 315 aa16.75■□□□□ 0.27
ITSN1-231ENST00000489261 APLP2Q06481 763 aa16.73■□□□□ 0.27
ITSN1-231ENST00000489261 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
ITSN1-231ENST00000489261 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
ITSN1-231ENST00000489261 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
ITSN1-231ENST00000489261 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
ITSN1-231ENST00000489261 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
ITSN1-231ENST00000489261 RANGAP1P46060 587 aaPredicted RBP16.59■□□□□ 0.25
ITSN1-231ENST00000489261 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
ITSN1-231ENST00000489261 JPH4Q96JJ6 628 aa16.58■□□□□ 0.24
ITSN1-231ENST00000489261 IQGAP2Q13576 1575 aa16.52■□□□□ 0.24
ITSN1-231ENST00000489261 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
ITSN1-231ENST00000489261 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
ITSN1-231ENST00000489261 CTTNBP2Q8WZ74 1663 aa16.5■□□□□ 0.23
ITSN1-231ENST00000489261 ADCY10Q96PN6 1610 aa16.46■□□□□ 0.23
ITSN1-231ENST00000489261 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
ITSN1-231ENST00000489261 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
ITSN1-231ENST00000489261 UGGT2Q9NYU1 1516 aa16.43■□□□□ 0.22
ITSN1-231ENST00000489261 KIF13AQ9H1H9 1805 aa16.42■□□□□ 0.22
ITSN1-231ENST00000489261 DISP1Q96F81 1524 aa16.41■□□□□ 0.22
ITSN1-231ENST00000489261 FMN1Q68DA7 1419 aa16.41■□□□□ 0.22
ITSN1-231ENST00000489261 CARMIL2Q6F5E8 1435 aa16.4■□□□□ 0.22
ITSN1-231ENST00000489261 MAPKBP1O60336 1514 aa16.39■□□□□ 0.21
ITSN1-231ENST00000489261 KIAA0556O60303 1618 aa16.38■□□□□ 0.21
ITSN1-231ENST00000489261 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
ITSN1-231ENST00000489261 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
ITSN1-231ENST00000489261 PTPRGP23470 1445 aa16.36■□□□□ 0.21
ITSN1-231ENST00000489261 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
ITSN1-231ENST00000489261 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
ITSN1-231ENST00000489261 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
ITSN1-231ENST00000489261 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
ITSN1-231ENST00000489261 FHOD3Q2V2M9 1422 aa16.34■□□□□ 0.21
ITSN1-231ENST00000489261 P3H3Q8IVL6 736 aa16.33■□□□□ 0.2
ITSN1-231ENST00000489261 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.2
ITSN1-231ENST00000489261 UHRF1BP1LA0JNW5 1464 aa16.31■□□□□ 0.2
ITSN1-231ENST00000489261 LRRC9Q6ZRR7 1453 aa16.31■□□□□ 0.2
ITSN1-231ENST00000489261 DIP2BQ9P265 1576 aa16.3■□□□□ 0.2
ITSN1-231ENST00000489261 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
ITSN1-231ENST00000489261 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
ITSN1-231ENST00000489261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
ITSN1-231ENST00000489261 UACAQ9BZF9 1416 aa16.28■□□□□ 0.2
ITSN1-231ENST00000489261 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
ITSN1-231ENST00000489261 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
ITSN1-231ENST00000489261 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
ITSN1-231ENST00000489261 CFAP43Q8NDM7 1665 aa16.26■□□□□ 0.19
ITSN1-231ENST00000489261 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
ITSN1-231ENST00000489261 ATP1B4Q9UN42 357 aaPredicted RBP16.24■□□□□ 0.19
ITSN1-231ENST00000489261 ZCCHC11Q5TAX3 1644 aaKnown RBP16.23■□□□□ 0.19
ITSN1-231ENST00000489261 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
ITSN1-231ENST00000489261 ABCA8O94911 1581 aa16.21■□□□□ 0.19
ITSN1-231ENST00000489261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.18
ITSN1-231ENST00000489261 CCDC18Q5T9S5 1454 aa16.19■□□□□ 0.18
ITSN1-231ENST00000489261 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
ITSN1-231ENST00000489261 TSPOAP1O95153 1857 aa16.18■□□□□ 0.18
ITSN1-231ENST00000489261 ASXL2Q76L83 1435 aa16.18■□□□□ 0.18
ITSN1-231ENST00000489261 GLI2P10070 1586 aa16.17■□□□□ 0.18
ITSN1-231ENST00000489261 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
ITSN1-231ENST00000489261 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
ITSN1-231ENST00000489261 MTUS2Q5JR59 1369 aa16.15■□□□□ 0.18
ITSN1-231ENST00000489261 PPRC1Q5VV67 1664 aaKnown RBP16.15■□□□□ 0.18
ITSN1-231ENST00000489261 HECW1Q76N89 1606 aa16.13■□□□□ 0.17
ITSN1-231ENST00000489261 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
ITSN1-231ENST00000489261 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
ITSN1-231ENST00000489261 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
ITSN1-231ENST00000489261 RAPGEF6Q8TEU7 1601 aa16.1■□□□□ 0.17
ITSN1-231ENST00000489261 EHBP1L1Q8N3D4 1523 aa16.09■□□□□ 0.17
ITSN1-231ENST00000489261 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
ITSN1-231ENST00000489261 KDM6BO15054 1643 aa16.07■□□□□ 0.16
ITSN1-231ENST00000489261 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
ITSN1-231ENST00000489261 SUPT6HQ7KZ85 1726 aaKnown RBP16.05■□□□□ 0.16
ITSN1-231ENST00000489261 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
ITSN1-231ENST00000489261 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
ITSN1-231ENST00000489261 ATP10BO94823 1461 aa16.03■□□□□ 0.16
ITSN1-231ENST00000489261 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
ITSN1-231ENST00000489261 MYOM3Q5VTT5 1437 aa16.02■□□□□ 0.16
ITSN1-231ENST00000489261 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
ITSN1-231ENST00000489261 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
ITSN1-231ENST00000489261 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
ITSN1-231ENST00000489261 NUP153P49790 1475 aaKnown RBP16■□□□□ 0.15
ITSN1-231ENST00000489261 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
ITSN1-231ENST00000489261 TEX14Q8IWB6 1497 aa15.98■□□□□ 0.15
ITSN1-231ENST00000489261 ITGAEP38570 1179 aa15.98■□□□□ 0.15
ITSN1-231ENST00000489261 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
ITSN1-231ENST00000489261 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms