RNA–Protein interactions for RNA: ENST00000489041.1

MTHFD2-208, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 2

Gene MTHFD2, Length 1,135 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-208ENST00000489041 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
MTHFD2-208ENST00000489041 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
MTHFD2-208ENST00000489041 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
MTHFD2-208ENST00000489041 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
MTHFD2-208ENST00000489041 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
MTHFD2-208ENST00000489041 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
MTHFD2-208ENST00000489041 KCNA4P22459 653 aa14.65□□□□□ -0.06
MTHFD2-208ENST00000489041 ABCA5Q8WWZ7 1642 aa14.64□□□□□ -0.07
MTHFD2-208ENST00000489041 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
MTHFD2-208ENST00000489041 FHAD1B1AJZ9 1412 aa14.59□□□□□ -0.07
MTHFD2-208ENST00000489041 NUP160Q12769 1436 aa14.58□□□□□ -0.07
MTHFD2-208ENST00000489041 TOP2BQ02880 1626 aa14.56□□□□□ -0.08
MTHFD2-208ENST00000489041 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
MTHFD2-208ENST00000489041 JPH4Q96JJ6 628 aa14.54□□□□□ -0.08
MTHFD2-208ENST00000489041 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
MTHFD2-208ENST00000489041 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
MTHFD2-208ENST00000489041 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.08
MTHFD2-208ENST00000489041 ERICH3Q5RHP9 1530 aa14.52□□□□□ -0.08
MTHFD2-208ENST00000489041 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
MTHFD2-208ENST00000489041 SHROOM2Q13796 1616 aa14.48□□□□□ -0.09
MTHFD2-208ENST00000489041 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
MTHFD2-208ENST00000489041 FAM69CQ0P6D2 419 aa14.4□□□□□ -0.1
MTHFD2-208ENST00000489041 IGF1RP08069 1367 aa14.39□□□□□ -0.11
MTHFD2-208ENST00000489041 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
MTHFD2-208ENST00000489041 KIAA0586Q9BVV6 1533 aa14.35□□□□□ -0.11
MTHFD2-208ENST00000489041 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
MTHFD2-208ENST00000489041 ABCC10Q5T3U5 1492 aa14.34□□□□□ -0.11
MTHFD2-208ENST00000489041 KIF13AQ9H1H9 1805 aa14.32□□□□□ -0.12
MTHFD2-208ENST00000489041 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
MTHFD2-208ENST00000489041 MAPKBP1O60336 1514 aa14.3□□□□□ -0.12
MTHFD2-208ENST00000489041 PTPRGP23470 1445 aa14.28□□□□□ -0.12
MTHFD2-208ENST00000489041 CARMIL1Q5VZK9 1371 aa14.28□□□□□ -0.12
MTHFD2-208ENST00000489041 ADCY10Q96PN6 1610 aa14.26□□□□□ -0.13
MTHFD2-208ENST00000489041 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
MTHFD2-208ENST00000489041 CUL7Q14999 1698 aa14.24□□□□□ -0.13
MTHFD2-208ENST00000489041 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
MTHFD2-208ENST00000489041 CARMIL2Q6F5E8 1435 aa14.24□□□□□ -0.13
MTHFD2-208ENST00000489041 DIP2BQ9P265 1576 aa14.23□□□□□ -0.13
MTHFD2-208ENST00000489041 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
MTHFD2-208ENST00000489041 KDM4FA0A1W2PPD8 638 aa14.19□□□□□ -0.14
MTHFD2-208ENST00000489041 ABCC2Q92887 1545 aa14.16□□□□□ -0.14
MTHFD2-208ENST00000489041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.14
MTHFD2-208ENST00000489041 KDM6BO15054 1643 aa14.15□□□□□ -0.14
MTHFD2-208ENST00000489041 PLB1Q6P1J6 1458 aa14.15□□□□□ -0.14
MTHFD2-208ENST00000489041 ASXL2Q76L83 1435 aa14.15□□□□□ -0.14
MTHFD2-208ENST00000489041 UACAQ9BZF9 1416 aa14.14□□□□□ -0.15
MTHFD2-208ENST00000489041 IQGAP2Q13576 1575 aa14.13□□□□□ -0.15
MTHFD2-208ENST00000489041 UHRF1BP1LA0JNW5 1464 aa14.13□□□□□ -0.15
MTHFD2-208ENST00000489041 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
MTHFD2-208ENST00000489041 DISP1Q96F81 1524 aa14.1□□□□□ -0.15
MTHFD2-208ENST00000489041 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
MTHFD2-208ENST00000489041 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
MTHFD2-208ENST00000489041 GLI2P10070 1586 aa14.09□□□□□ -0.15
MTHFD2-208ENST00000489041 KDM5BQ9UGL1 1544 aa14.06□□□□□ -0.16
MTHFD2-208ENST00000489041 UGGT2Q9NYU1 1516 aa14.05□□□□□ -0.16
MTHFD2-208ENST00000489041 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
MTHFD2-208ENST00000489041 EPRSP07814 1512 aaKnown RBP14.05□□□□□ -0.16
MTHFD2-208ENST00000489041 COL17A1Q9UMD9 1497 aaPredicted RBP14.01□□□□□ -0.17
MTHFD2-208ENST00000489041 TEX14Q8IWB6 1497 aa14□□□□□ -0.17
MTHFD2-208ENST00000489041 PPRC1Q5VV67 1664 aaKnown RBP14□□□□□ -0.17
MTHFD2-208ENST00000489041 KCNH8Q96L42 1107 aa13.99□□□□□ -0.17
MTHFD2-208ENST00000489041 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
MTHFD2-208ENST00000489041 KIAA0556O60303 1618 aa13.98□□□□□ -0.17
MTHFD2-208ENST00000489041 FAM9AQ8IZU1 332 aaPredicted RBP13.98□□□□□ -0.17
MTHFD2-208ENST00000489041 GOLGA3Q08378 1498 aa13.97□□□□□ -0.17
MTHFD2-208ENST00000489041 WDR7Q9Y4E6 1490 aa13.97□□□□□ -0.17
MTHFD2-208ENST00000489041 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
MTHFD2-208ENST00000489041 MAP3K4Q9Y6R4 1608 aa13.97□□□□□ -0.17
MTHFD2-208ENST00000489041 ADGRL1O94910 1474 aa13.96□□□□□ -0.17
MTHFD2-208ENST00000489041 CD109Q6YHK3 1445 aa13.94□□□□□ -0.18
MTHFD2-208ENST00000489041 PRXQ9BXM0 1461 aa13.91□□□□□ -0.18
MTHFD2-208ENST00000489041 ILDR1Q86SU0 546 aaPredicted RBP13.9□□□□□ -0.18
MTHFD2-208ENST00000489041 MAGI3Q5TCQ9 1506 aa13.9□□□□□ -0.19
MTHFD2-208ENST00000489041 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
MTHFD2-208ENST00000489041 ABCA8O94911 1581 aa13.88□□□□□ -0.19
MTHFD2-208ENST00000489041 CTTNBP2Q8WZ74 1663 aa13.87□□□□□ -0.19
MTHFD2-208ENST00000489041 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
MTHFD2-208ENST00000489041 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
MTHFD2-208ENST00000489041 CFAP43Q8NDM7 1665 aa13.84□□□□□ -0.19
MTHFD2-208ENST00000489041 ATP10BO94823 1461 aa13.83□□□□□ -0.2
MTHFD2-208ENST00000489041 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.2
MTHFD2-208ENST00000489041 ARAP3Q8WWN8 1544 aa13.8□□□□□ -0.2
MTHFD2-208ENST00000489041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
MTHFD2-208ENST00000489041 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
MTHFD2-208ENST00000489041 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
MTHFD2-208ENST00000489041 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
MTHFD2-208ENST00000489041 RAPGEF3O95398 923 aa13.77□□□□□ -0.21
MTHFD2-208ENST00000489041 RANGAP1P46060 587 aaPredicted RBP13.76□□□□□ -0.21
MTHFD2-208ENST00000489041 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
MTHFD2-208ENST00000489041 PLEKHD1A6NEE1 506 aa13.74□□□□□ -0.21
MTHFD2-208ENST00000489041 NEO1Q92859 1461 aa13.73□□□□□ -0.21
MTHFD2-208ENST00000489041 ABCA9Q8IUA7 1624 aa13.72□□□□□ -0.21
MTHFD2-208ENST00000489041 SAMD9Q5K651 1589 aa13.71□□□□□ -0.21
MTHFD2-208ENST00000489041 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.21
MTHFD2-208ENST00000489041 KIF21BO75037 1637 aa13.7□□□□□ -0.22
MTHFD2-208ENST00000489041 EEA1Q15075 1411 aa13.7□□□□□ -0.22
MTHFD2-208ENST00000489041 RAPGEF6Q8TEU7 1601 aa13.69□□□□□ -0.22
MTHFD2-208ENST00000489041 NUP153P49790 1475 aaKnown RBP13.68□□□□□ -0.22
MTHFD2-208ENST00000489041 PTPRMP28827 1452 aa13.67□□□□□ -0.22
MTHFD2-208ENST00000489041 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms