RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 SYNJ2O15056 1496 aa20.89■□□□□ 0.94
CHD1L-208ENST00000488864 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
CHD1L-208ENST00000488864 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
CHD1L-208ENST00000488864 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
CHD1L-208ENST00000488864 CLIP1P30622 1438 aa20.79■□□□□ 0.92
CHD1L-208ENST00000488864 CHD1O14646 1710 aa20.76■□□□□ 0.91
CHD1L-208ENST00000488864 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
CHD1L-208ENST00000488864 CEP170Q5SW79 1584 aa20.75■□□□□ 0.91
CHD1L-208ENST00000488864 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
CHD1L-208ENST00000488864 NUP160Q12769 1436 aa20.71■□□□□ 0.91
CHD1L-208ENST00000488864 KIAA0586Q9BVV6 1533 aa20.69■□□□□ 0.9
CHD1L-208ENST00000488864 IQGAP2Q13576 1575 aa20.69■□□□□ 0.9
CHD1L-208ENST00000488864 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
CHD1L-208ENST00000488864 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
CHD1L-208ENST00000488864 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
CHD1L-208ENST00000488864 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
CHD1L-208ENST00000488864 TTBK1Q5TCY1 1321 aaPredicted RBP20.6■□□□□ 0.89
CHD1L-208ENST00000488864 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
CHD1L-208ENST00000488864 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
CHD1L-208ENST00000488864 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
CHD1L-208ENST00000488864 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
CHD1L-208ENST00000488864 SAMD9Q5K651 1589 aa20.53■□□□□ 0.88
CHD1L-208ENST00000488864 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
CHD1L-208ENST00000488864 DISP1Q96F81 1524 aa20.52■□□□□ 0.88
CHD1L-208ENST00000488864 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
CHD1L-208ENST00000488864 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
CHD1L-208ENST00000488864 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
CHD1L-208ENST00000488864 KIAA0556O60303 1618 aa20.47■□□□□ 0.87
CHD1L-208ENST00000488864 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
CHD1L-208ENST00000488864 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
CHD1L-208ENST00000488864 SHROOM2Q13796 1616 aa20.42■□□□□ 0.86
CHD1L-208ENST00000488864 FMN1Q68DA7 1419 aa20.41■□□□□ 0.86
CHD1L-208ENST00000488864 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
CHD1L-208ENST00000488864 APLP2Q06481 763 aa20.38■□□□□ 0.85
CHD1L-208ENST00000488864 PCF11O94913 1555 aaKnown RBP20.37■□□□□ 0.85
CHD1L-208ENST00000488864 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
CHD1L-208ENST00000488864 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
CHD1L-208ENST00000488864 PTPRGP23470 1445 aa20.33■□□□□ 0.85
CHD1L-208ENST00000488864 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.84
CHD1L-208ENST00000488864 PLB1Q6P1J6 1458 aa20.32■□□□□ 0.84
CHD1L-208ENST00000488864 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
CHD1L-208ENST00000488864 KANK4Q5T7N3 995 aaPredicted RBP20.28■□□□□ 0.84
CHD1L-208ENST00000488864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
CHD1L-208ENST00000488864 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
CHD1L-208ENST00000488864 RAPGEF6Q8TEU7 1601 aa20.23■□□□□ 0.83
CHD1L-208ENST00000488864 NUP153P49790 1475 aaKnown RBP20.22■□□□□ 0.83
CHD1L-208ENST00000488864 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
CHD1L-208ENST00000488864 HECW1Q76N89 1606 aa20.21■□□□□ 0.83
CHD1L-208ENST00000488864 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
CHD1L-208ENST00000488864 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
CHD1L-208ENST00000488864 EPRSP07814 1512 aaKnown RBP20.19■□□□□ 0.82
CHD1L-208ENST00000488864 ABCA8O94911 1581 aa20.19■□□□□ 0.82
CHD1L-208ENST00000488864 UACAQ9BZF9 1416 aa20.19■□□□□ 0.82
CHD1L-208ENST00000488864 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
CHD1L-208ENST00000488864 CFAP43Q8NDM7 1665 aa20.13■□□□□ 0.81
CHD1L-208ENST00000488864 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
CHD1L-208ENST00000488864 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
CHD1L-208ENST00000488864 MAP3K1Q13233 1512 aa20.13■□□□□ 0.81
CHD1L-208ENST00000488864 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
CHD1L-208ENST00000488864 CYB5RLQ6IPT4 315 aa20.12■□□□□ 0.81
CHD1L-208ENST00000488864 ATP10BO94823 1461 aa20.11■□□□□ 0.81
CHD1L-208ENST00000488864 ABCC2Q92887 1545 aa20.1■□□□□ 0.81
CHD1L-208ENST00000488864 RIMBP3CA6NJZ7 1639 aa20.09■□□□□ 0.81
CHD1L-208ENST00000488864 RIMBP3BA6NNM3 1639 aa20.09■□□□□ 0.81
CHD1L-208ENST00000488864 RIMBP3Q9UFD9 1639 aa20.09■□□□□ 0.81
CHD1L-208ENST00000488864 MAGI3Q5TCQ9 1506 aa20.09■□□□□ 0.81
CHD1L-208ENST00000488864 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
CHD1L-208ENST00000488864 ADCY10Q96PN6 1610 aa20.04■□□□□ 0.8
CHD1L-208ENST00000488864 UHRF1BP1LA0JNW5 1464 aa20.03■□□□□ 0.8
CHD1L-208ENST00000488864 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
CHD1L-208ENST00000488864 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
CHD1L-208ENST00000488864 PHLDB1Q86UU1 1377 aa19.99■□□□□ 0.79
CHD1L-208ENST00000488864 ACIN1Q9UKV3 1341 aaKnown RBP19.98■□□□□ 0.79
CHD1L-208ENST00000488864 KDM5BQ9UGL1 1544 aa19.98■□□□□ 0.79
CHD1L-208ENST00000488864 ZCCHC11Q5TAX3 1644 aaKnown RBP19.97■□□□□ 0.79
CHD1L-208ENST00000488864 TROQ12816 1431 aaPredicted RBP19.97■□□□□ 0.79
CHD1L-208ENST00000488864 NEUROD1Q13562 356 aa19.97■□□□□ 0.79
CHD1L-208ENST00000488864 NCOA2Q15596 1464 aa19.97■□□□□ 0.79
CHD1L-208ENST00000488864 KCNH8Q96L42 1107 aa19.96■□□□□ 0.79
CHD1L-208ENST00000488864 NPM1P06748 294 aaKnown RBP eCLIP19.95■□□□□ 0.78
CHD1L-208ENST00000488864 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
CHD1L-208ENST00000488864 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
CHD1L-208ENST00000488864 KIF14Q15058 1648 aa19.91■□□□□ 0.78
CHD1L-208ENST00000488864 ASXL2Q76L83 1435 aa19.87■□□□□ 0.77
CHD1L-208ENST00000488864 FAM50AQ14320 339 aaKnown RBP19.86■□□□□ 0.77
CHD1L-208ENST00000488864 CCNB3Q8WWL7 1395 aa19.86■□□□□ 0.77
CHD1L-208ENST00000488864 MYOM3Q5VTT5 1437 aa19.85■□□□□ 0.77
CHD1L-208ENST00000488864 RRBP1Q9P2E9 1410 aaKnown RBP19.84■□□□□ 0.77
CHD1L-208ENST00000488864 ITGAEP38570 1179 aa19.84■□□□□ 0.77
CHD1L-208ENST00000488864 WDR7Q9Y4E6 1490 aa19.83■□□□□ 0.77
CHD1L-208ENST00000488864 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
CHD1L-208ENST00000488864 FGD6Q6ZV73 1430 aa19.82■□□□□ 0.76
CHD1L-208ENST00000488864 DIEXFQ68CQ4 756 aaKnown RBP19.82■□□□□ 0.76
CHD1L-208ENST00000488864 ABCC10Q5T3U5 1492 aa19.8■□□□□ 0.76
CHD1L-208ENST00000488864 GTF3C3Q9Y5Q9 886 aa19.8■□□□□ 0.76
CHD1L-208ENST00000488864 ZNF777Q9ULD5 760 aaPredicted RBP19.8■□□□□ 0.76
CHD1L-208ENST00000488864 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
CHD1L-208ENST00000488864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.79■□□□□ 0.76
CHD1L-208ENST00000488864 GPATCH8Q9UKJ3 1502 aaKnown RBP19.79■□□□□ 0.76
CHD1L-208ENST00000488864 ZNF644Q9H582 1327 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms