RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.81
TRAIP-209ENST00000488860 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
TRAIP-209ENST00000488860 KIAA0586Q9BVV6 1533 aa20.03■□□□□ 0.8
TRAIP-209ENST00000488860 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
TRAIP-209ENST00000488860 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
TRAIP-209ENST00000488860 SHROOM2Q13796 1616 aa19.99■□□□□ 0.79
TRAIP-209ENST00000488860 TNIKQ9UKE5 1360 aa19.95■□□□□ 0.79
TRAIP-209ENST00000488860 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
TRAIP-209ENST00000488860 UGGT2Q9NYU1 1516 aa19.92■□□□□ 0.78
TRAIP-209ENST00000488860 KIAA0556O60303 1618 aa19.9■□□□□ 0.78
TRAIP-209ENST00000488860 SAMD9Q5K651 1589 aa19.89■□□□□ 0.77
TRAIP-209ENST00000488860 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
TRAIP-209ENST00000488860 EFCAB5A4FU69 1503 aa19.87■□□□□ 0.77
TRAIP-209ENST00000488860 JPH4Q96JJ6 628 aa19.87■□□□□ 0.77
TRAIP-209ENST00000488860 CEP162Q5TB80 1403 aa19.86■□□□□ 0.77
TRAIP-209ENST00000488860 PRG4Q92954 1404 aaPredicted RBP19.86■□□□□ 0.77
TRAIP-209ENST00000488860 DISP1Q96F81 1524 aa19.85■□□□□ 0.77
TRAIP-209ENST00000488860 CLIP1P30622 1438 aa19.83■□□□□ 0.76
TRAIP-209ENST00000488860 CARMIL2Q6F5E8 1435 aa19.83■□□□□ 0.76
TRAIP-209ENST00000488860 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
TRAIP-209ENST00000488860 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
TRAIP-209ENST00000488860 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
TRAIP-209ENST00000488860 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
TRAIP-209ENST00000488860 ARHGAP35Q9NRY4 1499 aa19.8■□□□□ 0.76
TRAIP-209ENST00000488860 P3H3Q8IVL6 736 aa19.78■□□□□ 0.76
TRAIP-209ENST00000488860 FHOD3Q2V2M9 1422 aa19.77■□□□□ 0.76
TRAIP-209ENST00000488860 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
TRAIP-209ENST00000488860 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
TRAIP-209ENST00000488860 PTPRGP23470 1445 aa19.66■□□□□ 0.74
TRAIP-209ENST00000488860 PCF11O94913 1555 aaKnown RBP19.66■□□□□ 0.74
TRAIP-209ENST00000488860 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
TRAIP-209ENST00000488860 FMN1Q68DA7 1419 aa19.63■□□□□ 0.73
TRAIP-209ENST00000488860 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
TRAIP-209ENST00000488860 ABCA8O94911 1581 aa19.61■□□□□ 0.73
TRAIP-209ENST00000488860 PLB1Q6P1J6 1458 aa19.6■□□□□ 0.73
TRAIP-209ENST00000488860 HECW1Q76N89 1606 aa19.59■□□□□ 0.73
TRAIP-209ENST00000488860 ADCY10Q96PN6 1610 aa19.58■□□□□ 0.73
TRAIP-209ENST00000488860 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.72
TRAIP-209ENST00000488860 LRRIQ1Q96JM4 1722 aa19.57■□□□□ 0.72
TRAIP-209ENST00000488860 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
TRAIP-209ENST00000488860 UACAQ9BZF9 1416 aa19.56■□□□□ 0.72
TRAIP-209ENST00000488860 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
TRAIP-209ENST00000488860 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
TRAIP-209ENST00000488860 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
TRAIP-209ENST00000488860 CASKIN1Q8WXD9 1431 aa19.51■□□□□ 0.71
TRAIP-209ENST00000488860 ZCCHC11Q5TAX3 1644 aaKnown RBP19.51■□□□□ 0.71
TRAIP-209ENST00000488860 UHRF1BP1LA0JNW5 1464 aa19.5■□□□□ 0.71
TRAIP-209ENST00000488860 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
TRAIP-209ENST00000488860 CFAP43Q8NDM7 1665 aa19.49■□□□□ 0.71
TRAIP-209ENST00000488860 ARID3CA6NKF2 412 aa19.48■□□□□ 0.71
TRAIP-209ENST00000488860 CDK13Q14004 1512 aaKnown RBP19.47■□□□□ 0.71
TRAIP-209ENST00000488860 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
TRAIP-209ENST00000488860 EPRSP07814 1512 aaKnown RBP19.44■□□□□ 0.7
TRAIP-209ENST00000488860 KDM5BQ9UGL1 1544 aa19.41■□□□□ 0.7
TRAIP-209ENST00000488860 TIAM1Q13009 1591 aa19.4■□□□□ 0.7
TRAIP-209ENST00000488860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.69
TRAIP-209ENST00000488860 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
TRAIP-209ENST00000488860 ATP10BO94823 1461 aa19.39■□□□□ 0.69
TRAIP-209ENST00000488860 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRAIP-209ENST00000488860 APLP2Q06481 763 aa19.34■□□□□ 0.69
TRAIP-209ENST00000488860 MAPKBP1O60336 1514 aa19.32■□□□□ 0.68
TRAIP-209ENST00000488860 MAP3K1Q13233 1512 aa19.32■□□□□ 0.68
TRAIP-209ENST00000488860 MAGI3Q5TCQ9 1506 aa19.31■□□□□ 0.68
TRAIP-209ENST00000488860 EHBP1L1Q8N3D4 1523 aa19.3■□□□□ 0.68
TRAIP-209ENST00000488860 ASXL2Q76L83 1435 aa19.29■□□□□ 0.68
TRAIP-209ENST00000488860 WDR7Q9Y4E6 1490 aa19.28■□□□□ 0.68
TRAIP-209ENST00000488860 KIF14Q15058 1648 aa19.28■□□□□ 0.68
TRAIP-209ENST00000488860 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.68
TRAIP-209ENST00000488860 SUPT6HQ7KZ85 1726 aaKnown RBP19.26■□□□□ 0.67
TRAIP-209ENST00000488860 LRRC9Q6ZRR7 1453 aa19.26■□□□□ 0.67
TRAIP-209ENST00000488860 CDK11AQ9UQ88 783 aaPredicted RBP19.25■□□□□ 0.67
TRAIP-209ENST00000488860 TROQ12816 1431 aaPredicted RBP19.25■□□□□ 0.67
TRAIP-209ENST00000488860 PLEKHD1A6NEE1 506 aa19.24■□□□□ 0.67
TRAIP-209ENST00000488860 KIF13AQ9H1H9 1805 aa19.22■□□□□ 0.67
TRAIP-209ENST00000488860 DIP2BQ9P265 1576 aa19.22■□□□□ 0.67
TRAIP-209ENST00000488860 TTC37Q6PGP7 1564 aa19.2■□□□□ 0.66
TRAIP-209ENST00000488860 KANK4Q5T7N3 995 aaPredicted RBP19.2■□□□□ 0.66
TRAIP-209ENST00000488860 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
TRAIP-209ENST00000488860 KCNH8Q96L42 1107 aa19.19■□□□□ 0.66
TRAIP-209ENST00000488860 MYO5CQ9NQX4 1742 aa19.18■□□□□ 0.66
TRAIP-209ENST00000488860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.16■□□□□ 0.66
TRAIP-209ENST00000488860 ABCA9Q8IUA7 1624 aa19.16■□□□□ 0.66
TRAIP-209ENST00000488860 CDC42BPAQ5VT25 1732 aa19.16■□□□□ 0.66
TRAIP-209ENST00000488860 TSPOAP1O95153 1857 aa19.16■□□□□ 0.66
TRAIP-209ENST00000488860 ITSN2Q9NZM3 1697 aa19.15■□□□□ 0.66
TRAIP-209ENST00000488860 ABCC10Q5T3U5 1492 aa19.15■□□□□ 0.66
TRAIP-209ENST00000488860 NCOA2Q15596 1464 aa19.14■□□□□ 0.65
TRAIP-209ENST00000488860 GLI2P10070 1586 aa19.13■□□□□ 0.65
TRAIP-209ENST00000488860 MAP3K4Q9Y6R4 1608 aa19.13■□□□□ 0.65
TRAIP-209ENST00000488860 PREX2Q70Z35 1606 aa19.11■□□□□ 0.65
TRAIP-209ENST00000488860 CDC42BPBQ9Y5S2 1711 aa19.1■□□□□ 0.65
TRAIP-209ENST00000488860 FAM69CQ0P6D2 419 aa19.07■□□□□ 0.64
TRAIP-209ENST00000488860 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
TRAIP-209ENST00000488860 PPRC1Q5VV67 1664 aaKnown RBP19.05■□□□□ 0.64
TRAIP-209ENST00000488860 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
TRAIP-209ENST00000488860 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
TRAIP-209ENST00000488860 CFAP74Q9C0B2 1584 aa19.03■□□□□ 0.64
TRAIP-209ENST00000488860 CD109Q6YHK3 1445 aa19.03■□□□□ 0.64
TRAIP-209ENST00000488860 PHLDB1Q86UU1 1377 aa19.03■□□□□ 0.64
TRAIP-209ENST00000488860 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms