RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 KIAA0586Q9BVV6 1533 aa38.09■■■■□ 3.69
VAMP2-204ENST00000488857 JPH4Q96JJ6 628 aa38.06■■■■□ 3.68
VAMP2-204ENST00000488857 PRG4Q92954 1404 aaPredicted RBP38.03■■■■□ 3.68
VAMP2-204ENST00000488857 RAPGEF2Q9Y4G8 1499 aa37.96■■■■□ 3.67
VAMP2-204ENST00000488857 IQGAP2Q13576 1575 aa37.84■■■■□ 3.65
VAMP2-204ENST00000488857 PRXQ9BXM0 1461 aa37.8■■■■□ 3.64
VAMP2-204ENST00000488857 EEA1Q15075 1411 aa37.7■■■■□ 3.63
VAMP2-204ENST00000488857 CARMIL2Q6F5E8 1435 aa37.66■■■■□ 3.62
VAMP2-204ENST00000488857 CTTNBP2Q8WZ74 1663 aa37.66■■■■□ 3.62
VAMP2-204ENST00000488857 UGGT2Q9NYU1 1516 aa37.65■■■■□ 3.62
VAMP2-204ENST00000488857 CSRNP3Q8WYN3 585 aa37.63■■■■□ 3.61
VAMP2-204ENST00000488857 CHIC1Q5VXU3 224 aa37.62■■■■□ 3.61
VAMP2-204ENST00000488857 TRHP20396 242 aaPredicted RBP37.59■■■■□ 3.61
VAMP2-204ENST00000488857 DISP1Q96F81 1524 aa37.59■■■■□ 3.61
VAMP2-204ENST00000488857 TNIKQ9UKE5 1360 aa37.55■■■■□ 3.6
VAMP2-204ENST00000488857 PTPRGP23470 1445 aa37.53■■■■□ 3.6
VAMP2-204ENST00000488857 ADCY10Q96PN6 1610 aa37.53■■■■□ 3.6
VAMP2-204ENST00000488857 KIAA0556O60303 1618 aa37.47■■■■□ 3.59
VAMP2-204ENST00000488857 GOLGA3Q08378 1498 aa37.39■■■■□ 3.58
VAMP2-204ENST00000488857 MAPKBP1O60336 1514 aa37.38■■■■□ 3.57
VAMP2-204ENST00000488857 NPM1P06748 294 aaKnown RBP eCLIP37.35■■■■□ 3.57
VAMP2-204ENST00000488857 KIF21BO75037 1637 aa37.35■■■■□ 3.57
VAMP2-204ENST00000488857 UHRF1BP1LA0JNW5 1464 aa37.33■■■■□ 3.57
VAMP2-204ENST00000488857 FAM9AQ8IZU1 332 aaPredicted RBP37.33■■■■□ 3.57
VAMP2-204ENST00000488857 TTBK1Q5TCY1 1321 aaPredicted RBP37.3■■■■□ 3.56
VAMP2-204ENST00000488857 UACAQ9BZF9 1416 aa37.29■■■■□ 3.56
VAMP2-204ENST00000488857 ABCC2Q92887 1545 aa37.28■■■■□ 3.56
VAMP2-204ENST00000488857 KIF13AQ9H1H9 1805 aa37.26■■■■□ 3.55
VAMP2-204ENST00000488857 ABCC10Q5T3U5 1492 aa37.2■■■■□ 3.55
VAMP2-204ENST00000488857 SAMD9Q5K651 1589 aa37.17■■■■□ 3.54
VAMP2-204ENST00000488857 KDM5BQ9UGL1 1544 aa37.15■■■■□ 3.54
VAMP2-204ENST00000488857 DIP2BQ9P265 1576 aa37.14■■■■□ 3.54
VAMP2-204ENST00000488857 ABCA8O94911 1581 aa37.1■■■■□ 3.53
VAMP2-204ENST00000488857 PLB1Q6P1J6 1458 aa37.1■■■■□ 3.53
VAMP2-204ENST00000488857 FAM69CQ0P6D2 419 aa37.05■■■■□ 3.52
VAMP2-204ENST00000488857 ASXL2Q76L83 1435 aa37.04■■■■□ 3.52
VAMP2-204ENST00000488857 ZCCHC11Q5TAX3 1644 aaKnown RBP37.04■■■■□ 3.52
VAMP2-204ENST00000488857 P3H3Q8IVL6 736 aa36.97■■■■□ 3.51
VAMP2-204ENST00000488857 EFCAB5A4FU69 1503 aa36.95■■■■□ 3.51
VAMP2-204ENST00000488857 GLI2P10070 1586 aa36.92■■■■□ 3.5
VAMP2-204ENST00000488857 UBTFP17480 764 aaKnown RBP36.89■■■■□ 3.5
VAMP2-204ENST00000488857 FHOD3Q2V2M9 1422 aa36.85■■■■□ 3.49
VAMP2-204ENST00000488857 RANGAP1P46060 587 aaPredicted RBP36.84■■■■□ 3.49
VAMP2-204ENST00000488857 RAPGEF6Q8TEU7 1601 aa36.84■■■■□ 3.49
VAMP2-204ENST00000488857 EPRSP07814 1512 aaKnown RBP36.84■■■■□ 3.49
VAMP2-204ENST00000488857 WDR7Q9Y4E6 1490 aa36.83■■■■□ 3.49
VAMP2-204ENST00000488857 EHMT2Q96KQ7 1210 aa36.8■■■■□ 3.48
VAMP2-204ENST00000488857 TSPOAP1O95153 1857 aa36.77■■■■□ 3.48
VAMP2-204ENST00000488857 ATP10BO94823 1461 aa36.75■■■■□ 3.47
VAMP2-204ENST00000488857 MAP3K4Q9Y6R4 1608 aa36.73■■■■□ 3.47
VAMP2-204ENST00000488857 PPRC1Q5VV67 1664 aaKnown RBP36.7■■■■□ 3.47
VAMP2-204ENST00000488857 NUP153P49790 1475 aaKnown RBP36.7■■■■□ 3.47
VAMP2-204ENST00000488857 ARHGAP35Q9NRY4 1499 aa36.69■■■■□ 3.46
VAMP2-204ENST00000488857 ARID3CA6NKF2 412 aa36.6■■■■□ 3.45
VAMP2-204ENST00000488857 KDM6BO15054 1643 aa36.59■■■■□ 3.45
VAMP2-204ENST00000488857 FMN1Q68DA7 1419 aa36.59■■■■□ 3.45
VAMP2-204ENST00000488857 CFAP43Q8NDM7 1665 aa36.58■■■■□ 3.45
VAMP2-204ENST00000488857 TEX14Q8IWB6 1497 aa36.55■■■■□ 3.44
VAMP2-204ENST00000488857 KCNH8Q96L42 1107 aa36.54■■■■□ 3.44
VAMP2-204ENST00000488857 MAGI3Q5TCQ9 1506 aa36.49■■■■□ 3.43
VAMP2-204ENST00000488857 CD109Q6YHK3 1445 aa36.49■■■■□ 3.43
VAMP2-204ENST00000488857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.46■■■■□ 3.43
VAMP2-204ENST00000488857 HNRNPUL2Q1KMD3 747 aaKnown RBP36.46■■■■□ 3.43
VAMP2-204ENST00000488857 ABCA9Q8IUA7 1624 aa36.45■■■■□ 3.43
VAMP2-204ENST00000488857 HECW1Q76N89 1606 aa36.45■■■■□ 3.42
VAMP2-204ENST00000488857 CDK13Q14004 1512 aaKnown RBP36.38■■■■□ 3.41
VAMP2-204ENST00000488857 PLEKHD1A6NEE1 506 aa36.37■■■■□ 3.41
VAMP2-204ENST00000488857 CLIP1P30622 1438 aa36.36■■■■□ 3.41
VAMP2-204ENST00000488857 COL17A1Q9UMD9 1497 aaPredicted RBP36.35■■■■□ 3.41
VAMP2-204ENST00000488857 CASKIN1Q8WXD9 1431 aa36.28■■■■□ 3.4
VAMP2-204ENST00000488857 LRRIQ1Q96JM4 1722 aa36.25■■■■□ 3.39
VAMP2-204ENST00000488857 PCF11O94913 1555 aaKnown RBP36.25■■■■□ 3.39
VAMP2-204ENST00000488857 ATP1B4Q9UN42 357 aaPredicted RBP36.24■■■■□ 3.39
VAMP2-204ENST00000488857 PHLDB1Q86UU1 1377 aa36.21■■■■□ 3.39
VAMP2-204ENST00000488857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.21■■■■□ 3.39
VAMP2-204ENST00000488857 ARAP3Q8WWN8 1544 aa36.19■■■■□ 3.38
VAMP2-204ENST00000488857 FYCO1Q9BQS8 1478 aa36.19■■■■□ 3.38
VAMP2-204ENST00000488857 CDK11AQ9UQ88 783 aaPredicted RBP36.18■■■■□ 3.38
VAMP2-204ENST00000488857 NEO1Q92859 1461 aa36.18■■■■□ 3.38
VAMP2-204ENST00000488857 CCDC18Q5T9S5 1454 aa36.17■■■■□ 3.38
VAMP2-204ENST00000488857 TTC37Q6PGP7 1564 aa36.16■■■■□ 3.38
VAMP2-204ENST00000488857 CEP162Q5TB80 1403 aa36.14■■■■□ 3.38
VAMP2-204ENST00000488857 TROQ12816 1431 aaPredicted RBP36.11■■■■□ 3.37
VAMP2-204ENST00000488857 KIF14Q15058 1648 aa36.06■■■■□ 3.36
VAMP2-204ENST00000488857 CFAP74Q9C0B2 1584 aa36.06■■■■□ 3.36
VAMP2-204ENST00000488857 FANCAO15360 1455 aa36.02■■■■□ 3.36
VAMP2-204ENST00000488857 LOC105371045A0A1W2PR82 267 aa36.01■■■■□ 3.36
VAMP2-204ENST00000488857 PLCH2O75038 1416 aa36■■■■□ 3.35
VAMP2-204ENST00000488857 MYO5CQ9NQX4 1742 aa35.97■■■■□ 3.35
VAMP2-204ENST00000488857 AKNAQ7Z591 1439 aa35.96■■■■□ 3.35
VAMP2-204ENST00000488857 FRMPD1Q5SYB0 1578 aa35.93■■■■□ 3.34
VAMP2-204ENST00000488857 RAPGEF3O95398 923 aa35.88■■■■□ 3.33
VAMP2-204ENST00000488857 AEBP2Q6ZN18 517 aaPredicted RBP35.88■■■■□ 3.33
VAMP2-204ENST00000488857 RICTORQ6R327 1708 aa35.88■■■■□ 3.33
VAMP2-204ENST00000488857 DENND4BO75064 1496 aaPredicted RBP35.87■■■■□ 3.33
VAMP2-204ENST00000488857 KDM4FA0A1W2PPD8 638 aa35.83■■■■□ 3.33
VAMP2-204ENST00000488857 EFCAB2Q5VUJ9 269 aa35.82■■■■□ 3.32
VAMP2-204ENST00000488857 ADGRL1O94910 1474 aa35.81■■■■□ 3.32
VAMP2-204ENST00000488857 CDC42BPBQ9Y5S2 1711 aa35.8■■■■□ 3.32
VAMP2-204ENST00000488857 PREX2Q70Z35 1606 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms