RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
SFXN5-219ENST00000488839 HOXD11P31277 338 aaPredicted RBP21.47■■□□□ 1.03
SFXN5-219ENST00000488839 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
SFXN5-219ENST00000488839 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
SFXN5-219ENST00000488839 FHAD1B1AJZ9 1412 aa21.42■■□□□ 1.02
SFXN5-219ENST00000488839 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
SFXN5-219ENST00000488839 GRIN2AQ12879 1464 aa21.39■■□□□ 1.02
SFXN5-219ENST00000488839 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
SFXN5-219ENST00000488839 NUP160Q12769 1436 aa21.33■■□□□ 1.01
SFXN5-219ENST00000488839 RNF39Q9H2S5 420 aa21.33■■□□□ 1.01
SFXN5-219ENST00000488839 KIF27Q86VH2 1401 aa21.32■■□□□ 1
SFXN5-219ENST00000488839 ARAP1Q96P48 1450 aa21.32■■□□□ 1
SFXN5-219ENST00000488839 IGF1RP08069 1367 aa21.25■□□□□ 0.99
SFXN5-219ENST00000488839 CEP170Q5SW79 1584 aa21.25■□□□□ 0.99
SFXN5-219ENST00000488839 CNKSR2Q8WXI2 1034 aa21.24■□□□□ 0.99
SFXN5-219ENST00000488839 CUL7Q14999 1698 aa21.19■□□□□ 0.98
SFXN5-219ENST00000488839 RNF216Q9NWF9 866 aaPredicted RBP21.18■□□□□ 0.98
SFXN5-219ENST00000488839 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
SFXN5-219ENST00000488839 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
SFXN5-219ENST00000488839 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
SFXN5-219ENST00000488839 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
SFXN5-219ENST00000488839 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
SFXN5-219ENST00000488839 PRG4Q92954 1404 aaPredicted RBP21.06■□□□□ 0.96
SFXN5-219ENST00000488839 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
SFXN5-219ENST00000488839 C1QBPQ07021 282 aaKnown RBP21.03■□□□□ 0.96
SFXN5-219ENST00000488839 TRHP20396 242 aaPredicted RBP20.99■□□□□ 0.95
SFXN5-219ENST00000488839 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
SFXN5-219ENST00000488839 CARMIL2Q6F5E8 1435 aa20.89■□□□□ 0.94
SFXN5-219ENST00000488839 IQGAP2Q13576 1575 aa20.88■□□□□ 0.93
SFXN5-219ENST00000488839 NPM1P06748 294 aaKnown RBP eCLIP20.84■□□□□ 0.93
SFXN5-219ENST00000488839 PRXQ9BXM0 1461 aa20.83■□□□□ 0.93
SFXN5-219ENST00000488839 TNIKQ9UKE5 1360 aa20.83■□□□□ 0.92
SFXN5-219ENST00000488839 PTPRGP23470 1445 aa20.82■□□□□ 0.92
SFXN5-219ENST00000488839 EEA1Q15075 1411 aa20.8■□□□□ 0.92
SFXN5-219ENST00000488839 UGGT2Q9NYU1 1516 aa20.8■□□□□ 0.92
SFXN5-219ENST00000488839 CSRNP3Q8WYN3 585 aa20.78■□□□□ 0.92
SFXN5-219ENST00000488839 DISP1Q96F81 1524 aa20.75■□□□□ 0.91
SFXN5-219ENST00000488839 MAPKBP1O60336 1514 aa20.74■□□□□ 0.91
SFXN5-219ENST00000488839 ADCY10Q96PN6 1610 aa20.73■□□□□ 0.91
SFXN5-219ENST00000488839 CTTNBP2Q8WZ74 1663 aa20.71■□□□□ 0.91
SFXN5-219ENST00000488839 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
SFXN5-219ENST00000488839 UHRF1BP1LA0JNW5 1464 aa20.69■□□□□ 0.9
SFXN5-219ENST00000488839 UACAQ9BZF9 1416 aa20.68■□□□□ 0.9
SFXN5-219ENST00000488839 ABCC10Q5T3U5 1492 aa20.67■□□□□ 0.9
SFXN5-219ENST00000488839 KIAA0556O60303 1618 aa20.67■□□□□ 0.9
SFXN5-219ENST00000488839 ABCC2Q92887 1545 aa20.66■□□□□ 0.9
SFXN5-219ENST00000488839 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
SFXN5-219ENST00000488839 FAM69CQ0P6D2 419 aa20.61■□□□□ 0.89
SFXN5-219ENST00000488839 FAM9AQ8IZU1 332 aaPredicted RBP20.61■□□□□ 0.89
SFXN5-219ENST00000488839 KIF13AQ9H1H9 1805 aa20.61■□□□□ 0.89
SFXN5-219ENST00000488839 PLB1Q6P1J6 1458 aa20.58■□□□□ 0.89
SFXN5-219ENST00000488839 KDM5BQ9UGL1 1544 aa20.58■□□□□ 0.88
SFXN5-219ENST00000488839 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
SFXN5-219ENST00000488839 DIP2BQ9P265 1576 aa20.57■□□□□ 0.88
SFXN5-219ENST00000488839 KIF21BO75037 1637 aa20.52■□□□□ 0.88
SFXN5-219ENST00000488839 ASXL2Q76L83 1435 aa20.52■□□□□ 0.87
SFXN5-219ENST00000488839 ABCA8O94911 1581 aa20.49■□□□□ 0.87
SFXN5-219ENST00000488839 GLI2P10070 1586 aa20.49■□□□□ 0.87
SFXN5-219ENST00000488839 SAMD9Q5K651 1589 aa20.46■□□□□ 0.87
SFXN5-219ENST00000488839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.86
SFXN5-219ENST00000488839 ZCCHC11Q5TAX3 1644 aaKnown RBP20.45■□□□□ 0.86
SFXN5-219ENST00000488839 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
SFXN5-219ENST00000488839 P3H3Q8IVL6 736 aa20.4■□□□□ 0.86
SFXN5-219ENST00000488839 WDR7Q9Y4E6 1490 aa20.39■□□□□ 0.85
SFXN5-219ENST00000488839 EFCAB5A4FU69 1503 aa20.38■□□□□ 0.85
SFXN5-219ENST00000488839 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
SFXN5-219ENST00000488839 TSPOAP1O95153 1857 aa20.33■□□□□ 0.84
SFXN5-219ENST00000488839 ATP10BO94823 1461 aa20.32■□□□□ 0.84
SFXN5-219ENST00000488839 TEX14Q8IWB6 1497 aa20.32■□□□□ 0.84
SFXN5-219ENST00000488839 MAP3K4Q9Y6R4 1608 aa20.32■□□□□ 0.84
SFXN5-219ENST00000488839 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
SFXN5-219ENST00000488839 KDM6BO15054 1643 aa20.31■□□□□ 0.84
SFXN5-219ENST00000488839 FHOD3Q2V2M9 1422 aa20.28■□□□□ 0.84
SFXN5-219ENST00000488839 PPRC1Q5VV67 1664 aaKnown RBP20.28■□□□□ 0.84
SFXN5-219ENST00000488839 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.84
SFXN5-219ENST00000488839 KCNH8Q96L42 1107 aa20.26■□□□□ 0.83
SFXN5-219ENST00000488839 CFAP43Q8NDM7 1665 aa20.26■□□□□ 0.83
SFXN5-219ENST00000488839 MAGI3Q5TCQ9 1506 aa20.25■□□□□ 0.83
SFXN5-219ENST00000488839 CD109Q6YHK3 1445 aa20.25■□□□□ 0.83
SFXN5-219ENST00000488839 NUP153P49790 1475 aaKnown RBP20.24■□□□□ 0.83
SFXN5-219ENST00000488839 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
SFXN5-219ENST00000488839 FMN1Q68DA7 1419 aa20.21■□□□□ 0.83
SFXN5-219ENST00000488839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
SFXN5-219ENST00000488839 HNRNPUL2Q1KMD3 747 aaKnown RBP20.2■□□□□ 0.82
SFXN5-219ENST00000488839 PLEKHD1A6NEE1 506 aa20.19■□□□□ 0.82
SFXN5-219ENST00000488839 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
SFXN5-219ENST00000488839 ARID3CA6NKF2 412 aa20.18■□□□□ 0.82
SFXN5-219ENST00000488839 PHLDB1Q86UU1 1377 aa20.18■□□□□ 0.82
SFXN5-219ENST00000488839 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
SFXN5-219ENST00000488839 ABCA9Q8IUA7 1624 aa20.16■□□□□ 0.82
SFXN5-219ENST00000488839 COL17A1Q9UMD9 1497 aaPredicted RBP20.14■□□□□ 0.81
SFXN5-219ENST00000488839 ARAP3Q8WWN8 1544 aa20.09■□□□□ 0.81
SFXN5-219ENST00000488839 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
SFXN5-219ENST00000488839 HECW1Q76N89 1606 aa20.08■□□□□ 0.8
SFXN5-219ENST00000488839 NEO1Q92859 1461 aa20.07■□□□□ 0.8
SFXN5-219ENST00000488839 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
SFXN5-219ENST00000488839 CDK13Q14004 1512 aaKnown RBP20.01■□□□□ 0.79
SFXN5-219ENST00000488839 CASKIN1Q8WXD9 1431 aa20.01■□□□□ 0.79
SFXN5-219ENST00000488839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.99■□□□□ 0.79
SFXN5-219ENST00000488839 CLIP1P30622 1438 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms