RNA–Protein interactions for RNA: ENST00000488759.5

LRMDA-205, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-205ENST00000488759 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
LRMDA-205ENST00000488759 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
LRMDA-205ENST00000488759 KIF13AQ9H1H9 1805 aa18.41■□□□□ 0.54
LRMDA-205ENST00000488759 NPM1P06748 294 aaKnown RBP eCLIP18.39■□□□□ 0.53
LRMDA-205ENST00000488759 IGF1RP08069 1367 aa18.36■□□□□ 0.53
LRMDA-205ENST00000488759 KIAA0586Q9BVV6 1533 aa18.36■□□□□ 0.53
LRMDA-205ENST00000488759 ADCY10Q96PN6 1610 aa18.34■□□□□ 0.53
LRMDA-205ENST00000488759 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
LRMDA-205ENST00000488759 IQGAP2Q13576 1575 aa18.34■□□□□ 0.53
LRMDA-205ENST00000488759 TSPOAP1O95153 1857 aa18.33■□□□□ 0.52
LRMDA-205ENST00000488759 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
LRMDA-205ENST00000488759 CARMIL2Q6F5E8 1435 aa18.29■□□□□ 0.52
LRMDA-205ENST00000488759 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
LRMDA-205ENST00000488759 MAPKBP1O60336 1514 aa18.24■□□□□ 0.51
LRMDA-205ENST00000488759 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
LRMDA-205ENST00000488759 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
LRMDA-205ENST00000488759 RAPGEF2Q9Y4G8 1499 aa18.23■□□□□ 0.51
LRMDA-205ENST00000488759 PTPRGP23470 1445 aa18.23■□□□□ 0.51
LRMDA-205ENST00000488759 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
LRMDA-205ENST00000488759 TNIKQ9UKE5 1360 aa18.19■□□□□ 0.5
LRMDA-205ENST00000488759 KDM6BO15054 1643 aa18.16■□□□□ 0.5
LRMDA-205ENST00000488759 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
LRMDA-205ENST00000488759 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
LRMDA-205ENST00000488759 DISP1Q96F81 1524 aa18.1■□□□□ 0.49
LRMDA-205ENST00000488759 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
LRMDA-205ENST00000488759 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
LRMDA-205ENST00000488759 UACAQ9BZF9 1416 aa18.08■□□□□ 0.49
LRMDA-205ENST00000488759 ASXL2Q76L83 1435 aa18.07■□□□□ 0.48
LRMDA-205ENST00000488759 GOLGA3Q08378 1498 aa18.05■□□□□ 0.48
LRMDA-205ENST00000488759 PLB1Q6P1J6 1458 aa18.05■□□□□ 0.48
LRMDA-205ENST00000488759 UHRF1BP1LA0JNW5 1464 aa18.02■□□□□ 0.48
LRMDA-205ENST00000488759 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
LRMDA-205ENST00000488759 PPRC1Q5VV67 1664 aaKnown RBP17.97■□□□□ 0.47
LRMDA-205ENST00000488759 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
LRMDA-205ENST00000488759 GLI2P10070 1586 aa17.96■□□□□ 0.46
LRMDA-205ENST00000488759 MAP3K4Q9Y6R4 1608 aa17.95■□□□□ 0.46
LRMDA-205ENST00000488759 KDM5BQ9UGL1 1544 aa17.95■□□□□ 0.46
LRMDA-205ENST00000488759 ARID3CA6NKF2 412 aa17.94■□□□□ 0.46
LRMDA-205ENST00000488759 TEX14Q8IWB6 1497 aa17.94■□□□□ 0.46
LRMDA-205ENST00000488759 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
LRMDA-205ENST00000488759 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
LRMDA-205ENST00000488759 P3H3Q8IVL6 736 aa17.93■□□□□ 0.46
LRMDA-205ENST00000488759 WDR7Q9Y4E6 1490 aa17.93■□□□□ 0.46
LRMDA-205ENST00000488759 ABCA8O94911 1581 aa17.89■□□□□ 0.45
LRMDA-205ENST00000488759 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.45
LRMDA-205ENST00000488759 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
LRMDA-205ENST00000488759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
LRMDA-205ENST00000488759 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
LRMDA-205ENST00000488759 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
LRMDA-205ENST00000488759 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
LRMDA-205ENST00000488759 EEA1Q15075 1411 aa17.84■□□□□ 0.45
LRMDA-205ENST00000488759 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.45
LRMDA-205ENST00000488759 SAMD9Q5K651 1589 aa17.83■□□□□ 0.44
LRMDA-205ENST00000488759 CD109Q6YHK3 1445 aa17.79■□□□□ 0.44
LRMDA-205ENST00000488759 KIF21BO75037 1637 aa17.77■□□□□ 0.44
LRMDA-205ENST00000488759 ADGRL1O94910 1474 aa17.76■□□□□ 0.43
LRMDA-205ENST00000488759 FHOD3Q2V2M9 1422 aa17.76■□□□□ 0.43
LRMDA-205ENST00000488759 KDM4FA0A1W2PPD8 638 aa17.71■□□□□ 0.43
LRMDA-205ENST00000488759 EFCAB5A4FU69 1503 aa17.71■□□□□ 0.43
LRMDA-205ENST00000488759 MAGI3Q5TCQ9 1506 aa17.71■□□□□ 0.43
LRMDA-205ENST00000488759 ATP10BO94823 1461 aa17.7■□□□□ 0.42
LRMDA-205ENST00000488759 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
LRMDA-205ENST00000488759 UBTFP17480 764 aaKnown RBP17.7■□□□□ 0.42
LRMDA-205ENST00000488759 ABCA9Q8IUA7 1624 aa17.69■□□□□ 0.42
LRMDA-205ENST00000488759 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
LRMDA-205ENST00000488759 NUP153P49790 1475 aaKnown RBP17.64■□□□□ 0.41
LRMDA-205ENST00000488759 CFAP74Q9C0B2 1584 aa17.62■□□□□ 0.41
LRMDA-205ENST00000488759 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
LRMDA-205ENST00000488759 CDK13Q14004 1512 aaKnown RBP17.59■□□□□ 0.41
LRMDA-205ENST00000488759 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
LRMDA-205ENST00000488759 TTC37Q6PGP7 1564 aa17.57■□□□□ 0.4
LRMDA-205ENST00000488759 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
LRMDA-205ENST00000488759 ARAP3Q8WWN8 1544 aa17.56■□□□□ 0.4
LRMDA-205ENST00000488759 ARID4BQ4LE39 1312 aaPredicted RBP17.55■□□□□ 0.4
LRMDA-205ENST00000488759 NEO1Q92859 1461 aa17.55■□□□□ 0.4
LRMDA-205ENST00000488759 HECW2Q9P2P5 1572 aa17.53■□□□□ 0.4
LRMDA-205ENST00000488759 MYO5CQ9NQX4 1742 aa17.53■□□□□ 0.4
LRMDA-205ENST00000488759 FMN1Q68DA7 1419 aa17.53■□□□□ 0.4
LRMDA-205ENST00000488759 RAPGEF3O95398 923 aa17.52■□□□□ 0.4
LRMDA-205ENST00000488759 PHLDB1Q86UU1 1377 aa17.52■□□□□ 0.39
LRMDA-205ENST00000488759 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.52■□□□□ 0.39
LRMDA-205ENST00000488759 FANCAO15360 1455 aa17.51■□□□□ 0.39
LRMDA-205ENST00000488759 FRMPD1Q5SYB0 1578 aa17.5■□□□□ 0.39
LRMDA-205ENST00000488759 KIF14Q15058 1648 aa17.5■□□□□ 0.39
LRMDA-205ENST00000488759 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
LRMDA-205ENST00000488759 ARHGEF40Q8TER5 1519 aa17.48■□□□□ 0.39
LRMDA-205ENST00000488759 DENND4BO75064 1496 aaPredicted RBP17.47■□□□□ 0.39
LRMDA-205ENST00000488759 ARHGAP35Q9NRY4 1499 aa17.47■□□□□ 0.39
LRMDA-205ENST00000488759 RIMS1Q86UR5 1692 aaKnown RBP17.45■□□□□ 0.38
LRMDA-205ENST00000488759 LRRIQ1Q96JM4 1722 aa17.45■□□□□ 0.38
LRMDA-205ENST00000488759 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
LRMDA-205ENST00000488759 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
LRMDA-205ENST00000488759 CLIP1P30622 1438 aa17.45■□□□□ 0.38
LRMDA-205ENST00000488759 AKNAQ7Z591 1439 aa17.45■□□□□ 0.38
LRMDA-205ENST00000488759 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
LRMDA-205ENST00000488759 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
LRMDA-205ENST00000488759 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
LRMDA-205ENST00000488759 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
LRMDA-205ENST00000488759 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
LRMDA-205ENST00000488759 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms