RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CARMIL1Q5VZK9 1371 aa30.41■■■□□ 2.46
ITGB1-215ENST00000488494 KIAA0586Q9BVV6 1533 aa30.37■■■□□ 2.45
ITGB1-215ENST00000488494 JPH4Q96JJ6 628 aa30.35■■■□□ 2.45
ITGB1-215ENST00000488494 TRHP20396 242 aaPredicted RBP30.27■■■□□ 2.44
ITGB1-215ENST00000488494 RAPGEF2Q9Y4G8 1499 aa30.24■■■□□ 2.43
ITGB1-215ENST00000488494 IQGAP2Q13576 1575 aa30.22■■■□□ 2.43
ITGB1-215ENST00000488494 ADCY10Q96PN6 1610 aa30.07■■■□□ 2.4
ITGB1-215ENST00000488494 CARMIL2Q6F5E8 1435 aa30.05■■■□□ 2.4
ITGB1-215ENST00000488494 PRXQ9BXM0 1461 aa30.05■■■□□ 2.4
ITGB1-215ENST00000488494 CTTNBP2Q8WZ74 1663 aa30.04■■■□□ 2.4
ITGB1-215ENST00000488494 DISP1Q96F81 1524 aa30.01■■■□□ 2.39
ITGB1-215ENST00000488494 UGGT2Q9NYU1 1516 aa30.01■■■□□ 2.39
ITGB1-215ENST00000488494 TNIKQ9UKE5 1360 aa29.98■■■□□ 2.39
ITGB1-215ENST00000488494 PTPRGP23470 1445 aa29.97■■■□□ 2.39
ITGB1-215ENST00000488494 KIAA0556O60303 1618 aa29.95■■■□□ 2.38
ITGB1-215ENST00000488494 TTBK1Q5TCY1 1321 aaPredicted RBP29.94■■■□□ 2.38
ITGB1-215ENST00000488494 MAPKBP1O60336 1514 aa29.91■■■□□ 2.38
ITGB1-215ENST00000488494 EEA1Q15075 1411 aa29.89■■■□□ 2.38
ITGB1-215ENST00000488494 KIF13AQ9H1H9 1805 aa29.87■■■□□ 2.37
ITGB1-215ENST00000488494 NPM1P06748 294 aaKnown RBP eCLIP29.87■■■□□ 2.37
ITGB1-215ENST00000488494 CSRNP3Q8WYN3 585 aa29.84■■■□□ 2.37
ITGB1-215ENST00000488494 ABCC2Q92887 1545 aa29.81■■■□□ 2.36
ITGB1-215ENST00000488494 GOLGA3Q08378 1498 aa29.8■■■□□ 2.36
ITGB1-215ENST00000488494 DIP2BQ9P265 1576 aa29.79■■■□□ 2.36
ITGB1-215ENST00000488494 UHRF1BP1LA0JNW5 1464 aa29.79■■■□□ 2.36
ITGB1-215ENST00000488494 ABCC10Q5T3U5 1492 aa29.79■■■□□ 2.36
ITGB1-215ENST00000488494 UACAQ9BZF9 1416 aa29.79■■■□□ 2.36
ITGB1-215ENST00000488494 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
ITGB1-215ENST00000488494 FAM9AQ8IZU1 332 aaPredicted RBP29.72■■■□□ 2.35
ITGB1-215ENST00000488494 FAM69CQ0P6D2 419 aa29.69■■■□□ 2.34
ITGB1-215ENST00000488494 KIF21BO75037 1637 aa29.67■■■□□ 2.34
ITGB1-215ENST00000488494 KDM5BQ9UGL1 1544 aa29.66■■■□□ 2.34
ITGB1-215ENST00000488494 ZCCHC11Q5TAX3 1644 aaKnown RBP29.65■■■□□ 2.34
ITGB1-215ENST00000488494 PLB1Q6P1J6 1458 aa29.65■■■□□ 2.34
ITGB1-215ENST00000488494 ASXL2Q76L83 1435 aa29.64■■■□□ 2.34
ITGB1-215ENST00000488494 SAMD9Q5K651 1589 aa29.63■■■□□ 2.33
ITGB1-215ENST00000488494 ABCA8O94911 1581 aa29.61■■■□□ 2.33
ITGB1-215ENST00000488494 P3H3Q8IVL6 736 aa29.52■■■□□ 2.32
ITGB1-215ENST00000488494 GLI2P10070 1586 aa29.52■■■□□ 2.32
ITGB1-215ENST00000488494 TSPOAP1O95153 1857 aa29.51■■■□□ 2.31
ITGB1-215ENST00000488494 EPRSP07814 1512 aaKnown RBP29.48■■■□□ 2.31
ITGB1-215ENST00000488494 WDR7Q9Y4E6 1490 aa29.46■■■□□ 2.31
ITGB1-215ENST00000488494 RANGAP1P46060 587 aaPredicted RBP29.45■■■□□ 2.31
ITGB1-215ENST00000488494 EFCAB5A4FU69 1503 aa29.42■■■□□ 2.3
ITGB1-215ENST00000488494 PPRC1Q5VV67 1664 aaKnown RBP29.42■■■□□ 2.3
ITGB1-215ENST00000488494 FHOD3Q2V2M9 1422 aa29.42■■■□□ 2.3
ITGB1-215ENST00000488494 RAPGEF6Q8TEU7 1601 aa29.41■■■□□ 2.3
ITGB1-215ENST00000488494 EHMT2Q96KQ7 1210 aa29.4■■■□□ 2.3
ITGB1-215ENST00000488494 KDM6BO15054 1643 aa29.4■■■□□ 2.3
ITGB1-215ENST00000488494 MAP3K4Q9Y6R4 1608 aa29.4■■■□□ 2.3
ITGB1-215ENST00000488494 ARID3CA6NKF2 412 aa29.34■■■□□ 2.29
ITGB1-215ENST00000488494 ATP10BO94823 1461 aa29.31■■■□□ 2.28
ITGB1-215ENST00000488494 UBTFP17480 764 aaKnown RBP29.31■■■□□ 2.28
ITGB1-215ENST00000488494 NUP153P49790 1475 aaKnown RBP29.29■■■□□ 2.28
ITGB1-215ENST00000488494 TEX14Q8IWB6 1497 aa29.26■■■□□ 2.27
ITGB1-215ENST00000488494 CFAP43Q8NDM7 1665 aa29.25■■■□□ 2.27
ITGB1-215ENST00000488494 KCNH8Q96L42 1107 aa29.21■■■□□ 2.27
ITGB1-215ENST00000488494 ARHGAP35Q9NRY4 1499 aa29.19■■■□□ 2.26
ITGB1-215ENST00000488494 CD109Q6YHK3 1445 aa29.18■■■□□ 2.26
ITGB1-215ENST00000488494 MAGI3Q5TCQ9 1506 aa29.15■■■□□ 2.26
ITGB1-215ENST00000488494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.13■■■□□ 2.25
ITGB1-215ENST00000488494 HNRNPUL2Q1KMD3 747 aaKnown RBP29.13■■■□□ 2.25
ITGB1-215ENST00000488494 ABCA9Q8IUA7 1624 aa29.12■■■□□ 2.25
ITGB1-215ENST00000488494 COL17A1Q9UMD9 1497 aaPredicted RBP29.11■■■□□ 2.25
ITGB1-215ENST00000488494 FMN1Q68DA7 1419 aa29.1■■■□□ 2.25
ITGB1-215ENST00000488494 CDK13Q14004 1512 aaKnown RBP29.07■■■□□ 2.24
ITGB1-215ENST00000488494 HECW1Q76N89 1606 aa29.07■■■□□ 2.24
ITGB1-215ENST00000488494 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
ITGB1-215ENST00000488494 PLEKHD1A6NEE1 506 aa28.95■■■□□ 2.22
ITGB1-215ENST00000488494 PCF11O94913 1555 aaKnown RBP28.94■■■□□ 2.22
ITGB1-215ENST00000488494 TTC37Q6PGP7 1564 aa28.93■■■□□ 2.22
ITGB1-215ENST00000488494 ATP1B4Q9UN42 357 aaPredicted RBP28.93■■■□□ 2.22
ITGB1-215ENST00000488494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.92■■■□□ 2.221e-9■■■□□ 15
ITGB1-215ENST00000488494 ARAP3Q8WWN8 1544 aa28.9■■■□□ 2.22
ITGB1-215ENST00000488494 CLIP1P30622 1438 aa28.9■■■□□ 2.22
ITGB1-215ENST00000488494 LRRIQ1Q96JM4 1722 aa28.9■■■□□ 2.22
ITGB1-215ENST00000488494 NEO1Q92859 1461 aa28.89■■■□□ 2.22
ITGB1-215ENST00000488494 PHLDB1Q86UU1 1377 aa28.84■■■□□ 2.21
ITGB1-215ENST00000488494 CASKIN1Q8WXD9 1431 aa28.84■■■□□ 2.21
ITGB1-215ENST00000488494 CFAP74Q9C0B2 1584 aa28.83■■■□□ 2.21
ITGB1-215ENST00000488494 KIF14Q15058 1648 aa28.8■■■□□ 2.2
ITGB1-215ENST00000488494 FYCO1Q9BQS8 1478 aa28.8■■■□□ 2.2
ITGB1-215ENST00000488494 FRMPD1Q5SYB0 1578 aa28.79■■■□□ 2.2
ITGB1-215ENST00000488494 FANCAO15360 1455 aa28.79■■■□□ 2.2
ITGB1-215ENST00000488494 CCDC18Q5T9S5 1454 aa28.79■■■□□ 2.2
ITGB1-215ENST00000488494 ADGRL1O94910 1474 aa28.78■■■□□ 2.2
ITGB1-215ENST00000488494 KDM4FA0A1W2PPD8 638 aa28.78■■■□□ 2.2
ITGB1-215ENST00000488494 TROQ12816 1431 aaPredicted RBP28.77■■■□□ 2.2
ITGB1-215ENST00000488494 CDK11AQ9UQ88 783 aaPredicted RBP28.76■■■□□ 2.19
ITGB1-215ENST00000488494 MYO5CQ9NQX4 1742 aa28.73■■■□□ 2.19
ITGB1-215ENST00000488494 AKNAQ7Z591 1439 aa28.72■■■□□ 2.19
ITGB1-215ENST00000488494 RAPGEF3O95398 923 aa28.71■■■□□ 2.19
ITGB1-215ENST00000488494 CEP162Q5TB80 1403 aa28.7■■■□□ 2.19
ITGB1-215ENST00000488494 RICTORQ6R327 1708 aa28.69■■■□□ 2.18
ITGB1-215ENST00000488494 PLCH2O75038 1416 aa28.69■■■□□ 2.18
ITGB1-215ENST00000488494 DENND4BO75064 1496 aaPredicted RBP28.68■■■□□ 2.18
ITGB1-215ENST00000488494 ARHGEF40Q8TER5 1519 aa28.63■■■□□ 2.17
ITGB1-215ENST00000488494 ARHGAP5Q13017 1502 aa28.61■■■□□ 2.17
ITGB1-215ENST00000488494 ZMYM4Q5VZL5 1548 aa28.6■■■□□ 2.17
ITGB1-215ENST00000488494 POGZQ7Z3K3 1410 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms