RNA–Protein interactions for RNA: ENST00000488270.1

HDAC10-215, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-215ENST00000488270 SHROOM2Q13796 1616 aa32.24■■■□□ 2.75
HDAC10-215ENST00000488270 KIAA0586Q9BVV6 1533 aa32.19■■■□□ 2.74
HDAC10-215ENST00000488270 PRG4Q92954 1404 aaPredicted RBP32.17■■■□□ 2.74
HDAC10-215ENST00000488270 RAPGEF2Q9Y4G8 1499 aa32.08■■■□□ 2.73
HDAC10-215ENST00000488270 PRXQ9BXM0 1461 aa31.97■■■□□ 2.71
HDAC10-215ENST00000488270 CHIC1Q5VXU3 224 aa31.96■■■□□ 2.71
HDAC10-215ENST00000488270 CSRNP3Q8WYN3 585 aa31.92■■■□□ 2.7
HDAC10-215ENST00000488270 IQGAP2Q13576 1575 aa31.87■■■□□ 2.69
HDAC10-215ENST00000488270 TRHP20396 242 aaPredicted RBP31.87■■■□□ 2.69
HDAC10-215ENST00000488270 EEA1Q15075 1411 aa31.8■■■□□ 2.68
HDAC10-215ENST00000488270 CARMIL2Q6F5E8 1435 aa31.79■■■□□ 2.68
HDAC10-215ENST00000488270 DISP1Q96F81 1524 aa31.79■■■□□ 2.68
HDAC10-215ENST00000488270 PTPRGP23470 1445 aa31.77■■■□□ 2.68
HDAC10-215ENST00000488270 UGGT2Q9NYU1 1516 aa31.77■■■□□ 2.68
HDAC10-215ENST00000488270 TNIKQ9UKE5 1360 aa31.76■■■□□ 2.67
HDAC10-215ENST00000488270 FAM9AQ8IZU1 332 aaPredicted RBP31.73■■■□□ 2.67
HDAC10-215ENST00000488270 TTBK1Q5TCY1 1321 aaPredicted RBP31.67■■■□□ 2.66
HDAC10-215ENST00000488270 ADCY10Q96PN6 1610 aa31.65■■■□□ 2.66
HDAC10-215ENST00000488270 NPM1P06748 294 aaKnown RBP eCLIP31.6■■■□□ 2.65
HDAC10-215ENST00000488270 CTTNBP2Q8WZ74 1663 aa31.57■■■□□ 2.65
HDAC10-215ENST00000488270 KIAA0556O60303 1618 aa31.57■■■□□ 2.64
HDAC10-215ENST00000488270 UACAQ9BZF9 1416 aa31.54■■■□□ 2.64
HDAC10-215ENST00000488270 UHRF1BP1LA0JNW5 1464 aa31.52■■■□□ 2.64
HDAC10-215ENST00000488270 GOLGA3Q08378 1498 aa31.52■■■□□ 2.64
HDAC10-215ENST00000488270 MAPKBP1O60336 1514 aa31.49■■■□□ 2.63
HDAC10-215ENST00000488270 ABCC2Q92887 1545 aa31.48■■■□□ 2.63
HDAC10-215ENST00000488270 KIF21BO75037 1637 aa31.43■■■□□ 2.62
HDAC10-215ENST00000488270 ABCC10Q5T3U5 1492 aa31.43■■■□□ 2.62
HDAC10-215ENST00000488270 FAM69CQ0P6D2 419 aa31.41■■■□□ 2.62
HDAC10-215ENST00000488270 P3H3Q8IVL6 736 aa31.41■■■□□ 2.62
HDAC10-215ENST00000488270 PLB1Q6P1J6 1458 aa31.4■■■□□ 2.62
HDAC10-215ENST00000488270 KDM5BQ9UGL1 1544 aa31.38■■■□□ 2.61
HDAC10-215ENST00000488270 ASXL2Q76L83 1435 aa31.32■■■□□ 2.61
HDAC10-215ENST00000488270 EHMT2Q96KQ7 1210 aa31.32■■■□□ 2.6
HDAC10-215ENST00000488270 SAMD9Q5K651 1589 aa31.31■■■□□ 2.6
HDAC10-215ENST00000488270 KIF13AQ9H1H9 1805 aa31.31■■■□□ 2.6
HDAC10-215ENST00000488270 ABCA8O94911 1581 aa31.3■■■□□ 2.6
HDAC10-215ENST00000488270 RANGAP1P46060 587 aaPredicted RBP31.3■■■□□ 2.6
HDAC10-215ENST00000488270 DIP2BQ9P265 1576 aa31.3■■■□□ 2.6
HDAC10-215ENST00000488270 UBTFP17480 764 aaKnown RBP31.27■■■□□ 2.6
HDAC10-215ENST00000488270 ZCCHC11Q5TAX3 1644 aaKnown RBP31.19■■■□□ 2.58
HDAC10-215ENST00000488270 FHOD3Q2V2M9 1422 aa31.18■■■□□ 2.58
HDAC10-215ENST00000488270 EPRSP07814 1512 aaKnown RBP31.14■■■□□ 2.57
HDAC10-215ENST00000488270 ATP10BO94823 1461 aa31.12■■■□□ 2.57
HDAC10-215ENST00000488270 GLI2P10070 1586 aa31.12■■■□□ 2.57
HDAC10-215ENST00000488270 EFCAB5A4FU69 1503 aa31.1■■■□□ 2.57
HDAC10-215ENST00000488270 ARID3CA6NKF2 412 aa31.1■■■□□ 2.57
HDAC10-215ENST00000488270 WDR7Q9Y4E6 1490 aa31.09■■■□□ 2.57
HDAC10-215ENST00000488270 ARHGAP35Q9NRY4 1499 aa31.03■■■□□ 2.56
HDAC10-215ENST00000488270 NUP153P49790 1475 aaKnown RBP31.02■■■□□ 2.56
HDAC10-215ENST00000488270 KCNH8Q96L42 1107 aa31.01■■■□□ 2.55
HDAC10-215ENST00000488270 RAPGEF6Q8TEU7 1601 aa31.01■■■□□ 2.55
HDAC10-215ENST00000488270 MAP3K4Q9Y6R4 1608 aa30.91■■■□□ 2.54
HDAC10-215ENST00000488270 TSPOAP1O95153 1857 aa30.91■■■□□ 2.54
HDAC10-215ENST00000488270 PPRC1Q5VV67 1664 aaKnown RBP30.91■■■□□ 2.54
HDAC10-215ENST00000488270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.88■■■□□ 2.53
HDAC10-215ENST00000488270 HNRNPUL2Q1KMD3 747 aaKnown RBP30.88■■■□□ 2.53
HDAC10-215ENST00000488270 FMN1Q68DA7 1419 aa30.87■■■□□ 2.53
HDAC10-215ENST00000488270 CD109Q6YHK3 1445 aa30.87■■■□□ 2.53
HDAC10-215ENST00000488270 COL17A1Q9UMD9 1497 aaPredicted RBP30.82■■■□□ 2.53
HDAC10-215ENST00000488270 MAGI3Q5TCQ9 1506 aa30.81■■■□□ 2.52
HDAC10-215ENST00000488270 PLEKHD1A6NEE1 506 aa30.8■■■□□ 2.52
HDAC10-215ENST00000488270 KDM6BO15054 1643 aa30.8■■■□□ 2.52
HDAC10-215ENST00000488270 TEX14Q8IWB6 1497 aa30.79■■■□□ 2.52
HDAC10-215ENST00000488270 CLIP1P30622 1438 aa30.74■■■□□ 2.51
HDAC10-215ENST00000488270 CDK13Q14004 1512 aaKnown RBP30.74■■■□□ 2.51
HDAC10-215ENST00000488270 ATP1B4Q9UN42 357 aaPredicted RBP30.74■■■□□ 2.51
HDAC10-215ENST00000488270 CFAP43Q8NDM7 1665 aa30.74■■■□□ 2.51
HDAC10-215ENST00000488270 ABCA9Q8IUA7 1624 aa30.69■■■□□ 2.5
HDAC10-215ENST00000488270 LOC105371045A0A1W2PR82 267 aa30.68■■■□□ 2.5
HDAC10-215ENST00000488270 CASKIN1Q8WXD9 1431 aa30.65■■■□□ 2.5
HDAC10-215ENST00000488270 HECW1Q76N89 1606 aa30.65■■■□□ 2.5
HDAC10-215ENST00000488270 CDK11AQ9UQ88 783 aaPredicted RBP30.59■■■□□ 2.49
HDAC10-215ENST00000488270 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.57■■■□□ 2.49
HDAC10-215ENST00000488270 CEP162Q5TB80 1403 aa30.56■■■□□ 2.48
HDAC10-215ENST00000488270 PHLDB1Q86UU1 1377 aa30.56■■■□□ 2.48
HDAC10-215ENST00000488270 ARAP3Q8WWN8 1544 aa30.55■■■□□ 2.48
HDAC10-215ENST00000488270 PCF11O94913 1555 aaKnown RBP30.54■■■□□ 2.48
HDAC10-215ENST00000488270 NEO1Q92859 1461 aa30.52■■■□□ 2.48
HDAC10-215ENST00000488270 TROQ12816 1431 aaPredicted RBP30.51■■■□□ 2.47
HDAC10-215ENST00000488270 FYCO1Q9BQS8 1478 aa30.5■■■□□ 2.47
HDAC10-215ENST00000488270 LRRIQ1Q96JM4 1722 aa30.5■■■□□ 2.47
HDAC10-215ENST00000488270 TTC37Q6PGP7 1564 aa30.49■■■□□ 2.47
HDAC10-215ENST00000488270 CCDC18Q5T9S5 1454 aa30.47■■■□□ 2.47
HDAC10-215ENST00000488270 RAPGEF3O95398 923 aa30.46■■■□□ 2.47
HDAC10-215ENST00000488270 PLCH2O75038 1416 aa30.45■■■□□ 2.46
HDAC10-215ENST00000488270 KDM4FA0A1W2PPD8 638 aa30.43■■■□□ 2.46
HDAC10-215ENST00000488270 FANCAO15360 1455 aa30.42■■■□□ 2.46
HDAC10-215ENST00000488270 AKNAQ7Z591 1439 aa30.41■■■□□ 2.46
HDAC10-215ENST00000488270 KIF14Q15058 1648 aa30.39■■■□□ 2.46
HDAC10-215ENST00000488270 AEBP2Q6ZN18 517 aaPredicted RBP30.36■■■□□ 2.45
HDAC10-215ENST00000488270 EFCAB2Q5VUJ9 269 aa30.33■■■□□ 2.45
HDAC10-215ENST00000488270 DENND4BO75064 1496 aaPredicted RBP30.31■■■□□ 2.44
HDAC10-215ENST00000488270 FRMPD1Q5SYB0 1578 aa30.3■■■□□ 2.44
HDAC10-215ENST00000488270 SCAPERQ9BY12 1400 aa30.26■■■□□ 2.43
HDAC10-215ENST00000488270 CFAP74Q9C0B2 1584 aa30.24■■■□□ 2.43
HDAC10-215ENST00000488270 ADGRL1O94910 1474 aa30.23■■■□□ 2.43
HDAC10-215ENST00000488270 VPS8Q8N3P4 1428 aa30.21■■■□□ 2.43
HDAC10-215ENST00000488270 MYO5CQ9NQX4 1742 aa30.19■■■□□ 2.42
HDAC10-215ENST00000488270 MTUS2Q5JR59 1369 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms