RNA–Protein interactions for RNA: ENST00000488253.5

PLSCR1-215, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-215ENST00000488253 CUL7Q14999 1698 aa22.87■■□□□ 1.25
PLSCR1-215ENST00000488253 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
PLSCR1-215ENST00000488253 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
PLSCR1-215ENST00000488253 IGF1RP08069 1367 aa22.83■■□□□ 1.25
PLSCR1-215ENST00000488253 JPH4Q96JJ6 628 aa22.8■■□□□ 1.24
PLSCR1-215ENST00000488253 RUSC2Q8N2Y8 1516 aa22.79■■□□□ 1.24
PLSCR1-215ENST00000488253 PRG4Q92954 1404 aaPredicted RBP22.79■■□□□ 1.24
PLSCR1-215ENST00000488253 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
PLSCR1-215ENST00000488253 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
PLSCR1-215ENST00000488253 POTEDQ86YR6 584 aa22.6■■□□□ 1.21
PLSCR1-215ENST00000488253 NPM1P06748 294 aaKnown RBP eCLIP22.59■■□□□ 1.21
PLSCR1-215ENST00000488253 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
PLSCR1-215ENST00000488253 CARMIL2Q6F5E8 1435 aa22.56■■□□□ 1.2
PLSCR1-215ENST00000488253 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
PLSCR1-215ENST00000488253 TTBK1Q5TCY1 1321 aaPredicted RBP22.51■■□□□ 1.19
PLSCR1-215ENST00000488253 PTPRGP23470 1445 aa22.48■■□□□ 1.19
PLSCR1-215ENST00000488253 ADCY10Q96PN6 1610 aa22.47■■□□□ 1.19
PLSCR1-215ENST00000488253 TNIKQ9UKE5 1360 aa22.47■■□□□ 1.19
PLSCR1-215ENST00000488253 MAPKBP1O60336 1514 aa22.41■■□□□ 1.18
PLSCR1-215ENST00000488253 CTTNBP2Q8WZ74 1663 aa22.4■■□□□ 1.18
PLSCR1-215ENST00000488253 KIF13AQ9H1H9 1805 aa22.4■■□□□ 1.18
PLSCR1-215ENST00000488253 UGGT2Q9NYU1 1516 aa22.38■■□□□ 1.17
PLSCR1-215ENST00000488253 FAM69CQ0P6D2 419 aa22.37■■□□□ 1.17
PLSCR1-215ENST00000488253 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
PLSCR1-215ENST00000488253 ABCC10Q5T3U5 1492 aa22.35■■□□□ 1.17
PLSCR1-215ENST00000488253 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
PLSCR1-215ENST00000488253 KIAA0556O60303 1618 aa22.34■■□□□ 1.17
PLSCR1-215ENST00000488253 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
PLSCR1-215ENST00000488253 UACAQ9BZF9 1416 aa22.31■■□□□ 1.16
PLSCR1-215ENST00000488253 DIP2BQ9P265 1576 aa22.3■■□□□ 1.16
PLSCR1-215ENST00000488253 GOLGA3Q08378 1498 aa22.3■■□□□ 1.16
PLSCR1-215ENST00000488253 CSRNP3Q8WYN3 585 aa22.29■■□□□ 1.16
PLSCR1-215ENST00000488253 UHRF1BP1LA0JNW5 1464 aa22.28■■□□□ 1.16
PLSCR1-215ENST00000488253 EEA1Q15075 1411 aa22.27■■□□□ 1.16
PLSCR1-215ENST00000488253 FAM9AQ8IZU1 332 aaPredicted RBP22.25■■□□□ 1.15
PLSCR1-215ENST00000488253 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
PLSCR1-215ENST00000488253 ASXL2Q76L83 1435 aa22.21■■□□□ 1.15
PLSCR1-215ENST00000488253 TSPOAP1O95153 1857 aa22.2■■□□□ 1.14
PLSCR1-215ENST00000488253 KDM5BQ9UGL1 1544 aa22.17■■□□□ 1.14
PLSCR1-215ENST00000488253 ZCCHC11Q5TAX3 1644 aaKnown RBP22.17■■□□□ 1.14
PLSCR1-215ENST00000488253 MSH5O43196 834 aa22.15■■□□□ 1.14
PLSCR1-215ENST00000488253 KDM6BO15054 1643 aa22.11■■□□□ 1.13
PLSCR1-215ENST00000488253 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
PLSCR1-215ENST00000488253 GLI2P10070 1586 aa22.11■■□□□ 1.13
PLSCR1-215ENST00000488253 ABCA8O94911 1581 aa22.08■■□□□ 1.13
PLSCR1-215ENST00000488253 EPRSP07814 1512 aaKnown RBP22.06■■□□□ 1.12
PLSCR1-215ENST00000488253 RANGAP1P46060 587 aaPredicted RBP22.06■■□□□ 1.12
PLSCR1-215ENST00000488253 WDR7Q9Y4E6 1490 aa22.04■■□□□ 1.12
PLSCR1-215ENST00000488253 KIF21BO75037 1637 aa22.04■■□□□ 1.12
PLSCR1-215ENST00000488253 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
PLSCR1-215ENST00000488253 MAP3K4Q9Y6R4 1608 aa22■■□□□ 1.11
PLSCR1-215ENST00000488253 TEX14Q8IWB6 1497 aa21.99■■□□□ 1.11
PLSCR1-215ENST00000488253 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
PLSCR1-215ENST00000488253 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
PLSCR1-215ENST00000488253 KCNH8Q96L42 1107 aa21.98■■□□□ 1.11
PLSCR1-215ENST00000488253 UBTFP17480 764 aaKnown RBP21.95■■□□□ 1.1
PLSCR1-215ENST00000488253 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
PLSCR1-215ENST00000488253 RAPGEF6Q8TEU7 1601 aa21.95■■□□□ 1.1
PLSCR1-215ENST00000488253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
PLSCR1-215ENST00000488253 HNRNPUL2Q1KMD3 747 aaKnown RBP21.94■■□□□ 1.1
PLSCR1-215ENST00000488253 EFCAB5A4FU69 1503 aa21.92■■□□□ 1.1
PLSCR1-215ENST00000488253 FHOD3Q2V2M9 1422 aa21.92■■□□□ 1.1
PLSCR1-215ENST00000488253 CFAP43Q8NDM7 1665 aa21.91■■□□□ 1.1
PLSCR1-215ENST00000488253 ATP10BO94823 1461 aa21.9■■□□□ 1.1
PLSCR1-215ENST00000488253 CD109Q6YHK3 1445 aa21.89■■□□□ 1.1
PLSCR1-215ENST00000488253 MAGI3Q5TCQ9 1506 aa21.84■■□□□ 1.09
PLSCR1-215ENST00000488253 PIAS4Q8N2W9 510 aaPredicted RBP21.81■■□□□ 1.08
PLSCR1-215ENST00000488253 NUP153P49790 1475 aaKnown RBP21.81■■□□□ 1.08
PLSCR1-215ENST00000488253 COL17A1Q9UMD9 1497 aaPredicted RBP21.77■■□□□ 1.08
PLSCR1-215ENST00000488253 PLEKHD1A6NEE1 506 aa21.77■■□□□ 1.08
PLSCR1-215ENST00000488253 ABCA9Q8IUA7 1624 aa21.76■■□□□ 1.07
PLSCR1-215ENST00000488253 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
PLSCR1-215ENST00000488253 FMN1Q68DA7 1419 aa21.73■■□□□ 1.07
PLSCR1-215ENST00000488253 ARHGAP35Q9NRY4 1499 aa21.7■■□□□ 1.06
PLSCR1-215ENST00000488253 PHLDB1Q86UU1 1377 aa21.69■■□□□ 1.06
PLSCR1-215ENST00000488253 KDM4FA0A1W2PPD8 638 aa21.68■■□□□ 1.06
PLSCR1-215ENST00000488253 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
PLSCR1-215ENST00000488253 HECW1Q76N89 1606 aa21.68■■□□□ 1.06
PLSCR1-215ENST00000488253 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
PLSCR1-215ENST00000488253 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
PLSCR1-215ENST00000488253 NEO1Q92859 1461 aa21.64■■□□□ 1.05
PLSCR1-215ENST00000488253 CDK11AQ9UQ88 783 aaPredicted RBP21.63■■□□□ 1.05
PLSCR1-215ENST00000488253 ADGRL1O94910 1474 aa21.63■■□□□ 1.05
PLSCR1-215ENST00000488253 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
PLSCR1-215ENST00000488253 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
PLSCR1-215ENST00000488253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.59■■□□□ 1.05
PLSCR1-215ENST00000488253 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
PLSCR1-215ENST00000488253 FANCAO15360 1455 aa21.55■■□□□ 1.04
PLSCR1-215ENST00000488253 TTC37Q6PGP7 1564 aa21.55■■□□□ 1.04
PLSCR1-215ENST00000488253 ADRA2BP18089 450 aa21.53■■□□□ 1.04
PLSCR1-215ENST00000488253 CLIP1P30622 1438 aa21.53■■□□□ 1.04
PLSCR1-215ENST00000488253 AKNAQ7Z591 1439 aa21.52■■□□□ 1.04
PLSCR1-215ENST00000488253 DENND4BO75064 1496 aaPredicted RBP21.51■■□□□ 1.03
PLSCR1-215ENST00000488253 KIF14Q15058 1648 aa21.5■■□□□ 1.03
PLSCR1-215ENST00000488253 PCF11O94913 1555 aaKnown RBP21.48■■□□□ 1.03
PLSCR1-215ENST00000488253 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
PLSCR1-215ENST00000488253 CCDC18Q5T9S5 1454 aa21.48■■□□□ 1.03
PLSCR1-215ENST00000488253 TROQ12816 1431 aaPredicted RBP21.47■■□□□ 1.03
PLSCR1-215ENST00000488253 MYO5CQ9NQX4 1742 aa21.47■■□□□ 1.03
PLSCR1-215ENST00000488253 PLCH2O75038 1416 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms