RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 JPH4Q96JJ6 628 aa39.6■■■■□ 3.93
STRADB-209ENST00000488196 PRG4Q92954 1404 aaPredicted RBP39.54■■■■□ 3.92
STRADB-209ENST00000488196 KIAA0586Q9BVV6 1533 aa39.53■■■■□ 3.92
STRADB-209ENST00000488196 RAPGEF2Q9Y4G8 1499 aa39.45■■■■□ 3.91
STRADB-209ENST00000488196 IQGAP2Q13576 1575 aa39.28■■■■□ 3.88
STRADB-209ENST00000488196 CHIC1Q5VXU3 224 aa39.27■■■■□ 3.88
STRADB-209ENST00000488196 PRXQ9BXM0 1461 aa39.25■■■■□ 3.87
STRADB-209ENST00000488196 TRHP20396 242 aaPredicted RBP39.2■■■■□ 3.87
STRADB-209ENST00000488196 CSRNP3Q8WYN3 585 aa39.2■■■■□ 3.87
STRADB-209ENST00000488196 EEA1Q15075 1411 aa39.12■■■■□ 3.85
STRADB-209ENST00000488196 FAM9AQ8IZU1 332 aaPredicted RBP39.11■■■■□ 3.85
STRADB-209ENST00000488196 CARMIL2Q6F5E8 1435 aa39.1■■■■□ 3.85
STRADB-209ENST00000488196 CTTNBP2Q8WZ74 1663 aa39.09■■■■□ 3.85
STRADB-209ENST00000488196 TTBK1Q5TCY1 1321 aaPredicted RBP39.07■■■■□ 3.84
STRADB-209ENST00000488196 UGGT2Q9NYU1 1516 aa39.05■■■■□ 3.84
STRADB-209ENST00000488196 DISP1Q96F81 1524 aa39.04■■■■□ 3.84
STRADB-209ENST00000488196 PTPRGP23470 1445 aa39.03■■■■□ 3.84
STRADB-209ENST00000488196 TNIKQ9UKE5 1360 aa39.02■■■■□ 3.84
STRADB-209ENST00000488196 ADCY10Q96PN6 1610 aa38.96■■■■□ 3.83
STRADB-209ENST00000488196 KIAA0556O60303 1618 aa38.91■■■■□ 3.82
STRADB-209ENST00000488196 NPM1P06748 294 aaKnown RBP eCLIP38.87■■■■□ 3.81
STRADB-209ENST00000488196 GOLGA3Q08378 1498 aa38.79■■■■□ 3.8
STRADB-209ENST00000488196 KIF21BO75037 1637 aa38.76■■■■□ 3.8
STRADB-209ENST00000488196 UACAQ9BZF9 1416 aa38.74■■■■□ 3.79
STRADB-209ENST00000488196 MAPKBP1O60336 1514 aa38.71■■■■□ 3.79
STRADB-209ENST00000488196 UHRF1BP1LA0JNW5 1464 aa38.69■■■■□ 3.78
STRADB-209ENST00000488196 ABCC2Q92887 1545 aa38.68■■■■□ 3.78
STRADB-209ENST00000488196 EHMT2Q96KQ7 1210 aa38.68■■■■□ 3.78
STRADB-209ENST00000488196 KIF13AQ9H1H9 1805 aa38.66■■■■□ 3.78
STRADB-209ENST00000488196 P3H3Q8IVL6 736 aa38.66■■■■□ 3.78
STRADB-209ENST00000488196 RANGAP1P46060 587 aaPredicted RBP38.63■■■■□ 3.77
STRADB-209ENST00000488196 ABCC10Q5T3U5 1492 aa38.6■■■■□ 3.77
STRADB-209ENST00000488196 PLB1Q6P1J6 1458 aa38.59■■■■□ 3.77
STRADB-209ENST00000488196 FAM69CQ0P6D2 419 aa38.58■■■■□ 3.77
STRADB-209ENST00000488196 SAMD9Q5K651 1589 aa38.57■■■■□ 3.76
STRADB-209ENST00000488196 KDM5BQ9UGL1 1544 aa38.53■■■■□ 3.76
STRADB-209ENST00000488196 DIP2BQ9P265 1576 aa38.53■■■■□ 3.76
STRADB-209ENST00000488196 UBTFP17480 764 aaKnown RBP38.52■■■■□ 3.76
STRADB-209ENST00000488196 ABCA8O94911 1581 aa38.51■■■■□ 3.76
STRADB-209ENST00000488196 ASXL2Q76L83 1435 aa38.49■■■■□ 3.75
STRADB-209ENST00000488196 ZCCHC11Q5TAX3 1644 aaKnown RBP38.47■■■■□ 3.75
STRADB-209ENST00000488196 FHOD3Q2V2M9 1422 aa38.39■■■■□ 3.74
STRADB-209ENST00000488196 EFCAB5A4FU69 1503 aa38.32■■■■□ 3.72
STRADB-209ENST00000488196 ARID3CA6NKF2 412 aa38.31■■■■□ 3.72
STRADB-209ENST00000488196 TSPOAP1O95153 1857 aa38.3■■■■□ 3.72
STRADB-209ENST00000488196 RAPGEF6Q8TEU7 1601 aa38.27■■■■□ 3.72
STRADB-209ENST00000488196 EPRSP07814 1512 aaKnown RBP38.26■■■■□ 3.72
STRADB-209ENST00000488196 GLI2P10070 1586 aa38.24■■■■□ 3.71
STRADB-209ENST00000488196 WDR7Q9Y4E6 1490 aa38.23■■■■□ 3.71
STRADB-209ENST00000488196 ATP10BO94823 1461 aa38.22■■■■□ 3.71
STRADB-209ENST00000488196 ARHGAP35Q9NRY4 1499 aa38.16■■■■□ 3.7
STRADB-209ENST00000488196 KCNH8Q96L42 1107 aa38.14■■■■□ 3.7
STRADB-209ENST00000488196 NUP153P49790 1475 aaKnown RBP38.13■■■■□ 3.69
STRADB-209ENST00000488196 PPRC1Q5VV67 1664 aaKnown RBP38.09■■■■□ 3.69
STRADB-209ENST00000488196 MAP3K4Q9Y6R4 1608 aa38.09■■■■□ 3.69
STRADB-209ENST00000488196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.08■■■■□ 3.69
STRADB-209ENST00000488196 HNRNPUL2Q1KMD3 747 aaKnown RBP38.08■■■■□ 3.69
STRADB-209ENST00000488196 FMN1Q68DA7 1419 aa37.98■■■■□ 3.67
STRADB-209ENST00000488196 KDM6BO15054 1643 aa37.98■■■■□ 3.67
STRADB-209ENST00000488196 CD109Q6YHK3 1445 aa37.93■■■■□ 3.66
STRADB-209ENST00000488196 CFAP43Q8NDM7 1665 aa37.92■■■■□ 3.66
STRADB-209ENST00000488196 ATP1B4Q9UN42 357 aaPredicted RBP37.92■■■■□ 3.66
STRADB-209ENST00000488196 TEX14Q8IWB6 1497 aa37.9■■■■□ 3.66
STRADB-209ENST00000488196 CDK13Q14004 1512 aaKnown RBP37.87■■■■□ 3.65
STRADB-209ENST00000488196 PLEKHD1A6NEE1 506 aa37.86■■■■□ 3.65
STRADB-209ENST00000488196 CLIP1P30622 1438 aa37.86■■■■□ 3.65
STRADB-209ENST00000488196 HECW1Q76N89 1606 aa37.84■■■■□ 3.65
STRADB-209ENST00000488196 MAGI3Q5TCQ9 1506 aa37.83■■■■□ 3.65
STRADB-209ENST00000488196 ABCA9Q8IUA7 1624 aa37.8■■■■□ 3.64
STRADB-209ENST00000488196 COL17A1Q9UMD9 1497 aaPredicted RBP37.79■■■■□ 3.64
STRADB-209ENST00000488196 LOC105371045A0A1W2PR82 267 aa37.73■■■■□ 3.63
STRADB-209ENST00000488196 PCF11O94913 1555 aaKnown RBP37.71■■■■□ 3.63
STRADB-209ENST00000488196 LRRIQ1Q96JM4 1722 aa37.7■■■■□ 3.63
STRADB-209ENST00000488196 CASKIN1Q8WXD9 1431 aa37.69■■■■□ 3.62
STRADB-209ENST00000488196 CEP162Q5TB80 1403 aa37.63■■■■□ 3.61
STRADB-209ENST00000488196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.62■■■■□ 3.61
STRADB-209ENST00000488196 CDK11AQ9UQ88 783 aaPredicted RBP37.61■■■■□ 3.61
STRADB-209ENST00000488196 TTC37Q6PGP7 1564 aa37.58■■■■□ 3.61
STRADB-209ENST00000488196 FYCO1Q9BQS8 1478 aa37.56■■■■□ 3.6
STRADB-209ENST00000488196 CCDC18Q5T9S5 1454 aa37.52■■■■□ 3.6
STRADB-209ENST00000488196 TROQ12816 1431 aaPredicted RBP37.52■■■■□ 3.6
STRADB-209ENST00000488196 ARAP3Q8WWN8 1544 aa37.51■■■■□ 3.6
STRADB-209ENST00000488196 NEO1Q92859 1461 aa37.51■■■■□ 3.59
STRADB-209ENST00000488196 PHLDB1Q86UU1 1377 aa37.49■■■■□ 3.59
STRADB-209ENST00000488196 KIF14Q15058 1648 aa37.49■■■■□ 3.59
STRADB-209ENST00000488196 FANCAO15360 1455 aa37.42■■■■□ 3.58
STRADB-209ENST00000488196 RAPGEF3O95398 923 aa37.4■■■■□ 3.58
STRADB-209ENST00000488196 PLCH2O75038 1416 aa37.39■■■■□ 3.58
STRADB-209ENST00000488196 AKNAQ7Z591 1439 aa37.38■■■■□ 3.57
STRADB-209ENST00000488196 AEBP2Q6ZN18 517 aaPredicted RBP37.37■■■■□ 3.57
STRADB-209ENST00000488196 MYO5CQ9NQX4 1742 aa37.36■■■■□ 3.57
STRADB-209ENST00000488196 CFAP74Q9C0B2 1584 aa37.35■■■■□ 3.57
STRADB-209ENST00000488196 FRMPD1Q5SYB0 1578 aa37.29■■■■□ 3.56
STRADB-209ENST00000488196 KDM4FA0A1W2PPD8 638 aa37.28■■■■□ 3.56
STRADB-209ENST00000488196 DENND4BO75064 1496 aaPredicted RBP37.27■■■■□ 3.56
STRADB-209ENST00000488196 EFCAB2Q5VUJ9 269 aa37.26■■■■□ 3.56
STRADB-209ENST00000488196 RICTORQ6R327 1708 aa37.22■■■■□ 3.55
STRADB-209ENST00000488196 ARHGAP5Q13017 1502 aa37.22■■■■□ 3.55
STRADB-209ENST00000488196 ADGRL1O94910 1474 aa37.22■■■■□ 3.55
STRADB-209ENST00000488196 SCAPERQ9BY12 1400 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms